Protein

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Genbank accession
ALP47355.1 [GenBank]
Protein name
neck whiskers protein
RBP type
TF
Evidence RBPdetect2
Probability 0,67
Seq2Symm
C3 confidence 0,893
C3 0,893
C1 0,111
I 0,005
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MTIQKPIIEELRYVNGQPDPSQRPDQTRINWAKNGESINGASGDTTSDGVLNRAGVQIQENVLNSHYNTKAQQSAIEELVDTVNELTGGGDANLGSRVSQNEFDIDVLEGQMTNVIDDIGVPSSVDVLATGLHKGIEDVEADIGVRNSLDIPNEVENNDTVRKDLYFIKRRIGNDRNYDVNGNPSPSTNPTGMKYQIEDLYNKTATINAEIGENAIPLSINGRLYELEQNSQVGSVDQIRDELGETADADPARPVYLRLDDAESSISDNASDIALLQQEVETPTTGLLDRVSANEVTIADNQSQIGSVTNLFIEMSTDIGSYAVDDVYSGSMKARLSTFNDDINRLWGRLGATDAETGTVSYRVSQLESSLGERTNPVEFTAWYTIQENRGLVESAQADVDGLLTVVGQSDSEVGTLRARVLELEAQLDHALLSSDTPSTVDLTTTPTDVFSLFNLETDVSGYTYAGGVLTRNGLSLSKTMSIHWVVVSPVNTTITIRIDFDHDNGTSSSIEKTRTLRANQVTPVTITNVANLDDLSEIRVLASTAANVTIDHESFVLKV
Physico‐chemical
properties
protein length:560 AA
molecular weight: 60852,05820 Da
isoelectric point:4,27727
aromaticity:0,04821
hydropathy:-0,37661

Taxonomy

Phage
Vibrio phage phi-ST2 [NCBI] · taxon 1747714
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Vibrio alginolyticus [NCBI] · taxon 663
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
ALP47355.1 [NCBI]
Genbank nucleotide accession
KT919973 [NCBI]
CDS location
range 134551 -> 136233
strand +
CDS
ATGACAATTCAAAAGCCTATCATTGAAGAGCTTAGATATGTAAATGGTCAACCAGATCCTTCTCAACGTCCCGATCAGACTCGAATCAATTGGGCTAAGAACGGTGAAAGCATTAACGGTGCTTCTGGTGACACGACTTCAGACGGTGTATTAAACCGCGCAGGAGTACAGATTCAAGAAAACGTTCTAAACTCTCATTACAACACAAAAGCACAGCAAAGCGCAATTGAAGAACTTGTTGATACTGTTAACGAACTGACAGGTGGCGGTGACGCTAACTTAGGTTCTCGTGTGTCACAAAACGAGTTTGATATTGATGTACTTGAAGGTCAAATGACTAACGTCATTGATGACATCGGTGTACCGAGTAGCGTTGACGTACTTGCAACAGGTCTGCATAAAGGCATCGAAGATGTTGAAGCAGATATTGGTGTTCGTAACAGCCTAGATATTCCAAACGAAGTTGAAAACAACGATACAGTTCGTAAAGATCTATATTTCATCAAGCGTCGTATTGGTAATGACCGTAACTACGATGTCAACGGCAACCCATCGCCTAGTACAAACCCGACTGGTATGAAATATCAGATCGAAGACCTGTACAACAAAACAGCTACGATCAACGCTGAAATTGGCGAGAACGCAATCCCGCTTTCAATCAACGGTCGTTTATACGAACTAGAACAAAACTCGCAAGTTGGTTCTGTTGATCAGATTCGTGATGAACTAGGTGAAACGGCAGATGCTGACCCTGCTCGTCCCGTGTATCTTCGTCTTGATGATGCTGAAAGTTCTATTTCAGACAATGCATCAGATATTGCATTATTACAACAGGAAGTTGAAACGCCGACTACAGGTCTACTTGATCGCGTTAGCGCGAATGAAGTTACAATTGCAGATAATCAGTCACAAATTGGCTCCGTTACTAATTTATTTATTGAAATGTCAACTGATATCGGTTCATACGCAGTAGATGACGTGTACTCGGGTAGCATGAAAGCTCGTCTATCGACGTTTAACGACGATATCAATAGATTGTGGGGTCGTTTAGGGGCTACTGACGCAGAAACTGGCACAGTGTCTTACAGAGTGTCACAGCTTGAGTCTAGTCTAGGTGAGCGTACAAACCCTGTTGAATTTACTGCATGGTACACGATTCAAGAAAACCGTGGCTTAGTTGAATCTGCTCAGGCAGACGTTGACGGTCTATTGACTGTAGTTGGTCAGAGTGATAGTGAAGTGGGTACCTTGCGTGCTCGTGTTCTGGAACTTGAAGCACAGTTGGATCATGCATTATTGTCTTCTGATACTCCGAGTACAGTTGATTTGACAACTACACCTACAGATGTATTCAGTTTATTCAATCTTGAGACAGATGTGAGTGGTTACACGTATGCAGGTGGTGTATTGACACGTAACGGTCTATCATTGAGCAAAACGATGTCTATTCATTGGGTTGTTGTATCACCAGTAAACACTACAATCACGATTCGAATTGATTTCGATCATGATAACGGCACAAGCTCATCAATCGAGAAAACACGTACGCTTCGTGCAAACCAAGTTACTCCAGTTACAATCACTAACGTTGCGAATCTAGATGACTTGAGTGAGATTCGAGTATTGGCTAGCACAGCGGCTAACGTTACTATCGACCATGAATCATTTGTACTAAAAGTATAA

Genome Context

Tertiary structure

ALP47355.1
ESMFold2 structure
Source ESMFold2
pLDDT 61.0
Oligomeric state monomer
Download structure