Protein

View in Explore
Genbank accession
AZF94519.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAFDGSIKSLLQGVSQQVPRERLDGQVSVQLNRLSDVVNGNRRRPGARYLADVPTTSQYDNRVFASYVDVQDTANHVIINTETGQLVVLSEDFTTTLHSSTQAYLVASAASAVQTASLRGYLYIANTEKAPAKVYGSTTQQDPAKTGLYFVRTPAFQKDYDITIGNSTGTYLYQYTTPEASATDAVAHSKPSYIIGQLVALINAATGTHGVTATQYDAYMFLKSNTASLSVTTNAGSTYATASNQSRVNLVSDLPARLPAVGNGALIAVGTTERNFVWYQYDYTTSVWKEAGVYGSPTGFSNMPIRISLDGAYTVETPAYEGRLSGSDATNEDPGFIDNGVTGFGAYQGRLVILAGPEVCMSAAGNPLRWYRSTVTALLTEDPINIFSGAATSTNFRHCVQFNKDLLLFARSCQAVVPSSNVAITPQTAQIVITSGYTTDTLAQPGVVGRSVLYSMPRTEHFAGVLEIIPSNTTDSQYTSNDITAHIPRYLPGRIRSIVSSTTSNSSAFICTGDNHSLFIQDYLWSGDEKVQSAWHQWTLPYPIVCTWFVRDRVYIGMRDGTAILVVTIEPQAGTTIDSYVRPFSDVYLRVTITDRQFVLPTRLRDAVAAGENLFITFADTSMGGMWVGYESINPLTFVVTTVRGVPDGEYFVGLRYTSVLSPTPPLVRDSNGVVIGTSRTLLTRYELTLKDSGAFNAVITDSSRTLTDGTYSSLVYSSTELLPNNPTAASLGRTIIPVRAQAQDTVATFEVDADTDLCILDVEYVLQYRARRSRI
Physico‐chemical
properties
protein length:776 AA
molecular weight: 84359,46500 Da
isoelectric point:5,42553
aromaticity:0,09665
hydropathy:-0,08054

Domains

View on InterPro
Domain architecture
AZF94519.1
1 776 aa
TTP 4–776
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
AZF94519.1
1 776 aa
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9731
Central domain 139 339 202 0,1561
C-terminal 340 776 436 0,1593
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pectobacterium phage Ekidair [NCBI] · taxon 2489626
Uroviricota Caudoviricetes Autographivirales Corkvirinae Phimunavirus
Host
Pectobacterium atrosepticum [NCBI] · taxon 29471
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
AZF94519.1 [NCBI]
Genbank nucleotide accession
MK095201 [NCBI]
CDS location
range 31945 -> 34275
strand -
CDS
ATGGCCTTCGATGGCAGTATAAAGAGTCTGCTTCAAGGTGTCTCTCAACAGGTACCCCGCGAGCGCCTAGATGGACAAGTATCTGTACAGTTGAACCGTTTATCCGATGTGGTGAACGGTAACCGTAGACGCCCCGGCGCTCGGTACTTAGCAGATGTACCAACCACCTCACAATACGATAACCGTGTATTCGCGTCGTACGTAGATGTACAGGACACAGCGAACCACGTTATTATTAACACAGAGACAGGGCAGTTAGTTGTTCTATCCGAAGATTTCACTACCACCTTACACAGTAGCACACAGGCGTATCTAGTAGCCTCTGCTGCCTCTGCTGTACAGACAGCCTCACTAAGGGGTTACCTGTACATTGCAAACACTGAGAAGGCTCCTGCGAAGGTTTACGGGAGTACTACACAACAAGACCCAGCTAAGACTGGCTTGTACTTCGTGCGTACACCTGCGTTCCAGAAAGATTATGATATTACTATCGGTAATAGCACAGGAACGTACTTGTACCAGTACACCACCCCGGAGGCATCCGCCACAGACGCTGTAGCGCATTCTAAGCCGAGTTATATCATTGGGCAGCTTGTTGCATTAATTAATGCTGCGACTGGCACACACGGCGTTACAGCCACACAGTACGATGCTTACATGTTCCTTAAGAGTAACACGGCCTCTTTGTCTGTGACTACTAATGCCGGTAGCACCTATGCTACAGCTAGTAACCAGTCCCGAGTTAATCTTGTGTCTGACTTACCCGCACGACTACCAGCAGTTGGTAATGGTGCATTGATAGCAGTGGGTACCACGGAACGCAACTTCGTATGGTACCAGTATGACTACACTACATCAGTGTGGAAAGAGGCAGGTGTGTACGGTAGTCCCACAGGCTTCTCTAATATGCCTATACGTATCTCGCTGGATGGTGCATACACAGTAGAGACCCCCGCGTATGAGGGACGTTTATCAGGCTCAGACGCGACTAATGAAGACCCCGGCTTTATTGATAACGGGGTAACTGGATTTGGTGCATACCAAGGCCGCTTAGTAATTCTAGCGGGGCCGGAAGTATGCATGAGTGCAGCAGGTAACCCGTTACGTTGGTACCGCAGTACAGTAACCGCGTTGCTGACTGAGGACCCTATCAATATCTTCTCAGGCGCTGCTACCAGTACTAACTTCCGACACTGTGTACAGTTCAACAAGGACTTGCTACTATTTGCTCGTTCATGTCAGGCTGTAGTGCCTAGTAGCAACGTGGCTATCACTCCGCAAACTGCTCAGATAGTAATCACGTCGGGTTACACTACCGACACTCTGGCACAGCCGGGTGTGGTGGGGCGTTCTGTACTGTACAGCATGCCGCGTACCGAACACTTTGCAGGTGTCTTGGAGATTATCCCAAGCAACACTACAGACTCCCAGTACACCTCGAATGATATTACCGCCCATATCCCAAGGTACTTGCCGGGACGTATCCGCAGTATTGTGTCTAGTACTACTAGCAACTCCAGCGCATTCATTTGTACAGGGGATAATCATAGCCTGTTCATTCAGGATTACCTATGGTCTGGGGATGAGAAGGTACAGAGTGCGTGGCATCAGTGGACGCTTCCATACCCTATCGTGTGTACATGGTTCGTTCGTGACCGCGTGTACATTGGTATGCGGGATGGTACTGCTATCCTCGTGGTGACTATTGAGCCGCAGGCGGGTACCACGATAGACAGTTACGTACGGCCGTTCTCTGATGTGTACCTACGCGTCACCATCACAGACAGGCAGTTTGTCCTCCCTACGCGTTTGCGAGATGCAGTGGCTGCCGGAGAGAACCTGTTCATTACCTTTGCTGATACCAGTATGGGTGGTATGTGGGTGGGGTATGAAAGTATCAACCCCCTTACGTTTGTGGTAACTACCGTGCGTGGGGTTCCAGATGGTGAGTACTTCGTGGGCTTACGATACACGAGTGTGCTTAGTCCTACACCGCCACTGGTCCGTGACTCTAACGGCGTCGTTATAGGTACGAGCAGAACACTACTAACGCGATACGAGCTAACCCTGAAGGACTCCGGGGCATTCAATGCCGTAATAACGGATAGCTCGCGTACGCTGACGGATGGGACATACTCCAGTCTTGTGTATAGCAGTACTGAGCTATTACCTAACAACCCAACAGCTGCATCATTGGGTAGGACTATTATCCCTGTACGCGCACAGGCGCAAGACACAGTAGCTACCTTTGAGGTGGATGCTGATACCGACCTGTGTATTCTTGATGTTGAGTACGTCCTACAGTACCGAGCACGGAGGAGTAGAATATGA

Genome Context

Tertiary structure

AZF94519.1
ColabFold structure
Source ColabFold
pLDDT 29.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A novel 6-phage cocktail reduces Pectobacterium atrosepticum soft rot infection in potato tubers under simulated storage conditions Carstens,A.B. 2019-05-01 — GenBank