Protein

View in Explore
Genbank accession
AZF94519.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAFDGSIKSLLQGVSQQVPRERLDGQVSVQLNRLSDVVNGNRRRPGARYLADVPTTSQYDNRVFASYVDVQDTANHVIINTETGQLVVLSEDFTTTLHSSTQAYLVASAASAVQTASLRGYLYIANTEKAPAKVYGSTTQQDPAKTGLYFVRTPAFQKDYDITIGNSTGTYLYQYTTPEASATDAVAHSKPSYIIGQLVALINAATGTHGVTATQYDAYMFLKSNTASLSVTTNAGSTYATASNQSRVNLVSDLPARLPAVGNGALIAVGTTERNFVWYQYDYTTSVWKEAGVYGSPTGFSNMPIRISLDGAYTVETPAYEGRLSGSDATNEDPGFIDNGVTGFGAYQGRLVILAGPEVCMSAAGNPLRWYRSTVTALLTEDPINIFSGAATSTNFRHCVQFNKDLLLFARSCQAVVPSSNVAITPQTAQIVITSGYTTDTLAQPGVVGRSVLYSMPRTEHFAGVLEIIPSNTTDSQYTSNDITAHIPRYLPGRIRSIVSSTTSNSSAFICTGDNHSLFIQDYLWSGDEKVQSAWHQWTLPYPIVCTWFVRDRVYIGMRDGTAILVVTIEPQAGTTIDSYVRPFSDVYLRVTITDRQFVLPTRLRDAVAAGENLFITFADTSMGGMWVGYESINPLTFVVTTVRGVPDGEYFVGLRYTSVLSPTPPLVRDSNGVVIGTSRTLLTRYELTLKDSGAFNAVITDSSRTLTDGTYSSLVYSSTELLPNNPTAASLGRTIIPVRAQAQDTVATFEVDADTDLCILDVEYVLQYRARRSRI
Physico‐chemical
properties
protein length:776 AA
molecular weight: 84359,46500 Da
isoelectric point:5,42553
aromaticity:0,09665
hydropathy:-0,08054

Domains

Domains [InterPro]
IPR058003
4–776
IPR058003
AZF94519.1
1 776
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage Ekidair
[NCBI] 		2489626 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF94519.1 [NCBI]
Genbank nucleotide accession
MK095201 [NCBI]
CDS location
range 31945 -> 34275
strand -
CDS
ATGGCCTTCGATGGCAGTATAAAGAGTCTGCTTCAAGGTGTCTCTCAACAGGTACCCCGCGAGCGCCTAGATGGACAAGTATCTGTACAGTTGAACCGTTTATCCGATGTGGTGAACGGTAACCGTAGACGCCCCGGCGCTCGGTACTTAGCAGATGTACCAACCACCTCACAATACGATAACCGTGTATTCGCGTCGTACGTAGATGTACAGGACACAGCGAACCACGTTATTATTAACACAGAGACAGGGCAGTTAGTTGTTCTATCCGAAGATTTCACTACCACCTTACACAGTAGCACACAGGCGTATCTAGTAGCCTCTGCTGCCTCTGCTGTACAGACAGCCTCACTAAGGGGTTACCTGTACATTGCAAACACTGAGAAGGCTCCTGCGAAGGTTTACGGGAGTACTACACAACAAGACCCAGCTAAGACTGGCTTGTACTTCGTGCGTACACCTGCGTTCCAGAAAGATTATGATATTACTATCGGTAATAGCACAGGAACGTACTTGTACCAGTACACCACCCCGGAGGCATCCGCCACAGACGCTGTAGCGCATTCTAAGCCGAGTTATATCATTGGGCAGCTTGTTGCATTAATTAATGCTGCGACTGGCACACACGGCGTTACAGCCACACAGTACGATGCTTACATGTTCCTTAAGAGTAACACGGCCTCTTTGTCTGTGACTACTAATGCCGGTAGCACCTATGCTACAGCTAGTAACCAGTCCCGAGTTAATCTTGTGTCTGACTTACCCGCACGACTACCAGCAGTTGGTAATGGTGCATTGATAGCAGTGGGTACCACGGAACGCAACTTCGTATGGTACCAGTATGACTACACTACATCAGTGTGGAAAGAGGCAGGTGTGTACGGTAGTCCCACAGGCTTCTCTAATATGCCTATACGTATCTCGCTGGATGGTGCATACACAGTAGAGACCCCCGCGTATGAGGGACGTTTATCAGGCTCAGACGCGACTAATGAAGACCCCGGCTTTATTGATAACGGGGTAACTGGATTTGGTGCATACCAAGGCCGCTTAGTAATTCTAGCGGGGCCGGAAGTATGCATGAGTGCAGCAGGTAACCCGTTACGTTGGTACCGCAGTACAGTAACCGCGTTGCTGACTGAGGACCCTATCAATATCTTCTCAGGCGCTGCTACCAGTACTAACTTCCGACACTGTGTACAGTTCAACAAGGACTTGCTACTATTTGCTCGTTCATGTCAGGCTGTAGTGCCTAGTAGCAACGTGGCTATCACTCCGCAAACTGCTCAGATAGTAATCACGTCGGGTTACACTACCGACACTCTGGCACAGCCGGGTGTGGTGGGGCGTTCTGTACTGTACAGCATGCCGCGTACCGAACACTTTGCAGGTGTCTTGGAGATTATCCCAAGCAACACTACAGACTCCCAGTACACCTCGAATGATATTACCGCCCATATCCCAAGGTACTTGCCGGGACGTATCCGCAGTATTGTGTCTAGTACTACTAGCAACTCCAGCGCATTCATTTGTACAGGGGATAATCATAGCCTGTTCATTCAGGATTACCTATGGTCTGGGGATGAGAAGGTACAGAGTGCGTGGCATCAGTGGACGCTTCCATACCCTATCGTGTGTACATGGTTCGTTCGTGACCGCGTGTACATTGGTATGCGGGATGGTACTGCTATCCTCGTGGTGACTATTGAGCCGCAGGCGGGTACCACGATAGACAGTTACGTACGGCCGTTCTCTGATGTGTACCTACGCGTCACCATCACAGACAGGCAGTTTGTCCTCCCTACGCGTTTGCGAGATGCAGTGGCTGCCGGAGAGAACCTGTTCATTACCTTTGCTGATACCAGTATGGGTGGTATGTGGGTGGGGTATGAAAGTATCAACCCCCTTACGTTTGTGGTAACTACCGTGCGTGGGGTTCCAGATGGTGAGTACTTCGTGGGCTTACGATACACGAGTGTGCTTAGTCCTACACCGCCACTGGTCCGTGACTCTAACGGCGTCGTTATAGGTACGAGCAGAACACTACTAACGCGATACGAGCTAACCCTGAAGGACTCCGGGGCATTCAATGCCGTAATAACGGATAGCTCGCGTACGCTGACGGATGGGACATACTCCAGTCTTGTGTATAGCAGTACTGAGCTATTACCTAACAACCCAACAGCTGCATCATTGGGTAGGACTATTATCCCTGTACGCGCACAGGCGCAAGACACAGTAGCTACCTTTGAGGTGGATGCTGATACCGACCTGTGTATTCTTGATGTTGAGTACGTCCTACAGTACCGAGCACGGAGGAGTAGAATATGA

Tertiary structure

PDB ID
0e0ae4ac1a68a0f59a8a37a5a9b1af7b286273b2a6a8827224f0077b25ca5e85
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2322
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel 6-phage cocktail reduces Pectobacterium atrosepticum soft rot infection in potato tubers under simulated storage conditions Carstens,A.B. 2019-05-01 — GenBank