Protein

View in Explore
Genbank accession
WZK93790.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
Protein sequence
MSKWVDIIDSKGTTRITDDFSRLQFLDFQEEDVQTTVNSLEVKGTDGVLVGSSTFAPFKLILRFAYVGTDIKDYHLFKTRIRQTIYKREAYYIVQSDMPARKYAVLPSSISYEDKYGKNGEVTIEFTVFKGYAESLKDTSDITFLTDYWQWENGIVTDNIAYSFDEPRFSVWNGSFDTIDPLMRHDLIIKIKGVSDNGITITNHHTGDVFKYNKSLSQGSTLKIDGVHPYLNSNRAGIDTNHEYIKLLPGWNNIEIAGLKGDIRVNFKFSFIYR
Physico‐chemical
properties
protein length:274 AA
molecular weight: 31479,07470 Da
isoelectric point:5,89036
aromaticity:0,13504
hydropathy:-0,36277

Domains

Domains [InterPro]
IPR008841
STR
12–128
IPR008841 DC_0197
IPR008841
STR
12–135
IPR008841
G3DSA:2.40.30.200
ATT
16–133
G3DSA:2.40.30.200
WZK93790.1
1 274
Architecture
ATT
STR
ATT 12-133 | STR 134-274
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WZK93790.1
1 274
Domain Start End Length (AA) Confidence
N-terminal 1 194 194 0,9696
Central domain 195 263 70 0,0554
C-terminal 264 274 10 0,3341
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-194
Central
195-263
C-terminal
264-274

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SpP
[NCBI] 		3138563 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus saprophyticus
[NCBI] 		29385 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZK93790.1 [NCBI]
Genbank nucleotide accession
PP468606.1 [NCBI]
CDS location
range 80488 -> 81312
strand +
CDS
ATGAGCAAATGGGTTGATATCATAGATAGTAAAGGAACAACAAGAATTACTGATGATTTTTCTCGTTTGCAATTCTTAGATTTTCAAGAAGAGGATGTACAAACAACAGTAAACTCTCTTGAGGTTAAAGGGACAGATGGCGTACTGGTTGGATCCAGTACGTTTGCACCCTTTAAATTAATATTAAGGTTTGCATACGTAGGAACAGATATAAAGGATTATCACTTATTTAAAACTAGAATAAGACAAACAATATATAAAAGGGAAGCATATTATATAGTTCAGTCAGATATGCCAGCAAGAAAATATGCTGTGCTACCGAGTTCAATATCTTATGAAGATAAGTATGGTAAAAACGGAGAAGTAACAATAGAATTTACAGTATTTAAAGGATATGCAGAAAGTTTAAAAGATACGTCAGATATAACATTCTTAACAGATTATTGGCAATGGGAAAATGGAATTGTTACAGATAATATTGCATATAGTTTTGATGAACCAAGATTTTCAGTGTGGAATGGATCATTTGATACAATTGACCCCTTAATGAGACATGATTTAATCATTAAAATAAAAGGTGTTTCTGATAATGGTATAACTATAACAAATCATCATACAGGCGATGTTTTTAAATATAATAAATCTTTATCACAAGGAAGTACATTAAAAATAGATGGTGTTCATCCTTATTTAAATAGTAATAGGGCAGGAATTGACACCAATCATGAGTATATAAAATTACTTCCAGGTTGGAACAATATAGAAATCGCAGGACTTAAAGGCGATATAAGAGTAAATTTTAAATTCAGTTTTATATATAGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b77944c6d7694988ba330699ab336b8625e31ecb10b26b5f42edfbec426363ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9337
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50