Phage RBP Database

Genbank accession

WZK93790.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,73

Protein sequence

MSKWVDIIDSKGTTRITDDFSRLQFLDFQEEDVQTTVNSLEVKGTDGVLVGSSTFAPFKLILRFAYVGTDIKDYHLFKTRIRQTIYKREAYYIVQSDMPARKYAVLPSSISYEDKYGKNGEVTIEFTVFKGYAESLKDTSDITFLTDYWQWENGIVTDNIAYSFDEPRFSVWNGSFDTIDPLMRHDLIIKIKGVSDNGITITNHHTGDVFKYNKSLSQGSTLKIDGVHPYLNSNRAGIDTNHEYIKLLPGWNNIEIAGLKGDIRVNFKFSFIYR

Physico‐chemical properties

protein length:	274 AA
molecular weight:	31479,07470 Da
isoelectric point:	5,89036
aromaticity:	0,13504
hydropathy:	-0,36277

Domain architecture

WZK93790.1

1 274 aa

ATT 12–133 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR008841
STR

IPR008841

IPR008841
STR

IPR008841

G3DSA:2.40.30.200
ATT

G3DSA:2.40.30.200

WZK93790.1

1274 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0197
STR

DC_0197

WZK93790.1

1274 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR008841	STR	DC_0499	12	128	InterPro cluster	Siphovirus-type tail component, RIFT-related domain	Central	Low	Positional only	178 proteins / 178 hits
IPR008841	STR	DC_0499	12	135	InterPro cluster	Siphovirus-type tail component, RIFT-related domain	Central	Low	Positional only	178 proteins / 178 hits
G3DSA:2.40.30.200	ATT	G3DSA:2.40.30.200	16	133	Merged direct domain	G3DSA:2.40.30.200	N-terminal	Low	Positional only	23 proteins / 23 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WZK93790.1

1 274 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	194	194	0,9696
Central domain	195	263	70	0,0554
C-terminal	264	274	10	0,3341

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Staphylococcus phage SpP [NCBI] · taxon 3138563

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Staphylococcus saprophyticus [NCBI] · taxon 29385

cellular organisms Bacteria Bacillati Bacillota Bacilli Bacillales

Genbank protein accession

WZK93790.1 [NCBI]

Genbank nucleotide accession

PP468606.1 [NCBI]

CDS location

range 80488 -> 81312
strand +

CDS

ATGAGCAAATGGGTTGATATCATAGATAGTAAAGGAACAACAAGAATTACTGATGATTTTTCTCGTTTGCAATTCTTAGATTTTCAAGAAGAGGATGTACAAACAACAGTAAACTCTCTTGAGGTTAAAGGGACAGATGGCGTACTGGTTGGATCCAGTACGTTTGCACCCTTTAAATTAATATTAAGGTTTGCATACGTAGGAACAGATATAAAGGATTATCACTTATTTAAAACTAGAATAAGACAAACAATATATAAAAGGGAAGCATATTATATAGTTCAGTCAGATATGCCAGCAAGAAAATATGCTGTGCTACCGAGTTCAATATCTTATGAAGATAAGTATGGTAAAAACGGAGAAGTAACAATAGAATTTACAGTATTTAAAGGATATGCAGAAAGTTTAAAAGATACGTCAGATATAACATTCTTAACAGATTATTGGCAATGGGAAAATGGAATTGTTACAGATAATATTGCATATAGTTTTGATGAACCAAGATTTTCAGTGTGGAATGGATCATTTGATACAATTGACCCCTTAATGAGACATGATTTAATCATTAAAATAAAAGGTGTTTCTGATAATGGTATAACTATAACAAATCATCATACAGGCGATGTTTTTAAATATAATAAATCTTTATCACAAGGAAGTACATTAAAAATAGATGGTGTTCATCCTTATTTAAATAGTAATAGGGCAGGAATTGACACCAATCATGAGTATATAAAATTACTTCCAGGTTGGAACAATATAGAAATCGCAGGACTTAAAGGCGATATAAGAGTAAATTTTAAATTCAGTTTTATATATAGGTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)