Protein

View in Explore
Genbank accession
UKH48608.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MAVAIIGPKFYAWDRNGKPLAFGKVYTYQARTNNPKATYQSEDGIVENTNPVILNGEGYANIYLDGSYKVVVKDSDDNEIWTADPVTSAQAEEWVNCLAAEYVSTTVFRVNGSFTDKYEAGRRVRIDNNTAEYAYSTIIDSSFAAGQTSVTISDAVITTGIQGVCVSIVGNESTGNVSVENVTQLIASQFNPGQAVKVKGYYVAGDVGDLNYLIYSLQGYRDYLGDQAWNPDDAGDHLLSNGNVAILQRDSDHVSLLKLGFTNDAITDELWDKAKAYADYYKIAWGLSDIECTISSTRELPQYGLVGAGQITGDIVKVTRNREKFHQRGGRFVCSTFWVSGAQYIKTEWIWAQTKFLFDGNAPDYGVFWCSFGKHQGDHEVDLNKGQSLNECNFQFIRGGFHVYGSKDNYVGPGTPFDEFNLNAIEMIDTTGADITAEDGTTGWHVLNESRSNQHNTIRQWYAEGSANRSIRGRWHVLMAYVDSPANSPYALPATSHVLFNPDNSVRNQSDYFAAAPENLAKGGCWNILNASSKGEPLCMFSSGGATGNVVADATEPTGIGYKYGGASSLDFSSYRIKLSKPKTGRYTIFFWMHHVNGSQSIQVENDGSAQAHALSVYHDQGDGWRLYRISSAARSDGIDDELTIFHRSPDSEFYLGAVWATPTKTALLPWVYPEEMIEAVSTDGIVATIPEALPVGGIIKNLAVSGNPGSSSWRKQSSTEIVETPSEVPKLKSRFYPEVTAPANVATPIARISVSGFNSQGSGEIEVFIRNTQSSPDFIGGSGYFRAALALLKDGDGGVLNENIQTFGAAWIQKNGGTTPPTFQLTQVDGNTWDVEVVTPAGVGDSIVSSKVRLFDLGGDFTFDDLP
Physico‐chemical
properties
protein length:868 AA
molecular weight: 94619,58700 Da
isoelectric point:4,86658
aromaticity:0,11175
hydropathy:-0,30530

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
UKH48608.1
1 868 aa
Domain Start End Length (AA) Confidence
N-terminal 1 96 96 0,9872
Central domain 97 521 426 0,6884
C-terminal 522 868 346 0,9200
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Vibrio phage vB_ValP_FGH [NCBI] · taxon 2911663
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Vibrio alginolyticus [NCBI] · taxon 663
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
UKH48608.1 [NCBI]
Genbank nucleotide accession
OL762410.1 [NCBI]
CDS location
range 29368 -> 31974
strand +
CDS
ATGGCAGTCGCAATTATCGGCCCTAAGTTTTACGCTTGGGACAGAAACGGCAAACCGCTGGCCTTTGGTAAAGTTTACACCTATCAGGCTCGCACCAATAACCCAAAGGCAACGTACCAGTCTGAAGACGGTATTGTTGAAAATACCAACCCGGTCATTCTTAACGGTGAAGGCTACGCCAACATTTACCTTGATGGCTCTTACAAGGTTGTGGTCAAAGACTCTGATGATAACGAGATCTGGACTGCTGACCCTGTTACAAGTGCTCAAGCTGAAGAGTGGGTGAATTGCTTGGCTGCTGAATACGTCAGCACCACAGTATTCCGTGTTAATGGTAGTTTCACCGACAAGTATGAGGCTGGTCGCCGTGTTCGTATTGACAACAACACCGCCGAGTATGCTTATTCAACCATCATCGACTCAAGCTTTGCCGCAGGGCAGACAAGTGTAACCATTTCTGATGCCGTTATCACAACTGGCATTCAGGGGGTTTGCGTGTCGATCGTCGGCAACGAATCAACTGGCAATGTTTCTGTTGAAAACGTAACTCAGCTTATTGCCTCTCAGTTCAATCCGGGCCAAGCCGTGAAGGTGAAAGGTTACTATGTTGCTGGTGATGTTGGTGATCTTAACTACTTGATTTACTCGCTTCAGGGTTATCGTGATTACCTTGGCGATCAGGCTTGGAACCCTGACGATGCTGGCGATCACTTGCTCAGCAATGGCAATGTGGCAATTCTTCAGCGAGACTCTGATCATGTTTCATTGCTGAAGCTTGGCTTTACCAATGACGCAATCACTGATGAGCTTTGGGATAAGGCAAAAGCCTATGCCGATTATTACAAGATTGCTTGGGGGCTTTCAGATATTGAATGCACCATTAGCTCAACCCGTGAGCTGCCTCAATATGGTTTGGTTGGCGCAGGTCAGATCACTGGCGATATTGTTAAAGTCACCCGCAACCGTGAGAAGTTCCACCAGCGCGGTGGTCGATTCGTGTGCTCTACCTTTTGGGTTTCAGGTGCTCAATACATCAAGACAGAATGGATTTGGGCTCAAACCAAGTTCCTGTTCGATGGTAACGCTCCTGACTATGGCGTCTTTTGGTGCTCATTTGGTAAGCACCAAGGCGATCACGAAGTCGATTTGAATAAAGGCCAGTCACTAAACGAGTGTAATTTCCAGTTTATTCGTGGCGGCTTCCATGTTTACGGAAGCAAAGACAACTATGTTGGCCCCGGCACTCCTTTCGATGAGTTCAACTTGAACGCCATTGAAATGATTGACACCACTGGCGCAGATATTACAGCAGAAGACGGCACAACTGGCTGGCATGTTCTTAACGAGTCACGAAGCAACCAGCACAACACTATTCGCCAATGGTACGCAGAAGGATCAGCTAACCGATCTATTCGTGGCCGCTGGCATGTTCTTATGGCCTATGTTGATAGCCCTGCAAACTCGCCTTACGCGCTGCCGGCAACAAGCCATGTTCTTTTCAACCCTGACAACTCAGTTCGTAACCAGTCTGATTACTTTGCGGCTGCTCCTGAGAACTTGGCTAAAGGTGGCTGTTGGAACATCTTGAACGCCAGCAGTAAAGGTGAGCCGCTTTGTATGTTTTCCTCTGGTGGCGCTACTGGCAATGTTGTTGCTGATGCCACTGAGCCTACCGGGATCGGTTACAAGTACGGCGGCGCGAGCTCGCTTGATTTCTCTTCATATCGAATTAAGTTGAGCAAGCCCAAGACCGGACGTTACACGATCTTCTTCTGGATGCACCACGTTAACGGTAGCCAGTCGATTCAGGTTGAGAATGATGGTTCTGCTCAAGCTCACGCACTGAGCGTTTATCATGATCAAGGGGACGGGTGGCGCTTGTATCGGATCAGTTCAGCCGCTCGAAGTGATGGTATTGACGATGAGTTAACTATCTTCCACCGCTCGCCTGACTCTGAGTTTTACCTTGGCGCTGTTTGGGCTACACCAACGAAGACCGCACTTCTTCCTTGGGTTTACCCTGAAGAAATGATTGAGGCCGTGTCTACTGATGGTATTGTTGCGACAATTCCAGAGGCGCTACCTGTTGGCGGTATTATCAAGAATCTTGCGGTTTCTGGTAATCCGGGATCTTCATCATGGCGCAAGCAAAGCTCAACCGAGATTGTTGAAACGCCTTCTGAGGTTCCAAAGCTGAAGTCACGCTTTTATCCAGAGGTTACGGCCCCGGCTAATGTGGCGACACCTATCGCAAGAATTTCAGTGAGTGGGTTCAACTCTCAAGGTTCTGGCGAGATTGAAGTGTTTATCCGAAATACTCAGTCTTCGCCTGATTTTATTGGTGGCTCTGGTTACTTCCGCGCTGCTCTTGCTTTGCTCAAGGATGGTGACGGCGGCGTTCTTAATGAAAACATTCAGACTTTTGGTGCTGCTTGGATTCAAAAGAATGGCGGGACTACGCCGCCAACCTTCCAGTTGACTCAGGTTGACGGCAATACTTGGGATGTTGAGGTGGTTACGCCTGCTGGCGTTGGTGATTCTATTGTTAGCTCAAAGGTTCGATTGTTCGACCTTGGCGGCGACTTCACCTTTGATGACTTGCCTTAA

Genome Context

Tertiary structure

UKH48608.1
ColabFold structure
Source ColabFold
pLDDT 31.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete sequence of phage Podoviridae sp. vB_ValP_FGH Wang,P. and Wang,X. 2012-12-15 — GenBank