Protein

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Genbank accession
UKH48608.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,90
Seq2Symm
C3 confidence 0,997
C3 0,997
C1 0,005
D3 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAVAIIGPKFYAWDRNGKPLAFGKVYTYQARTNNPKATYQSEDGIVENTNPVILNGEGYANIYLDGSYKVVVKDSDDNEIWTADPVTSAQAEEWVNCLAAEYVSTTVFRVNGSFTDKYEAGRRVRIDNNTAEYAYSTIIDSSFAAGQTSVTISDAVITTGIQGVCVSIVGNESTGNVSVENVTQLIASQFNPGQAVKVKGYYVAGDVGDLNYLIYSLQGYRDYLGDQAWNPDDAGDHLLSNGNVAILQRDSDHVSLLKLGFTNDAITDELWDKAKAYADYYKIAWGLSDIECTISSTRELPQYGLVGAGQITGDIVKVTRNREKFHQRGGRFVCSTFWVSGAQYIKTEWIWAQTKFLFDGNAPDYGVFWCSFGKHQGDHEVDLNKGQSLNECNFQFIRGGFHVYGSKDNYVGPGTPFDEFNLNAIEMIDTTGADITAEDGTTGWHVLNESRSNQHNTIRQWYAEGSANRSIRGRWHVLMAYVDSPANSPYALPATSHVLFNPDNSVRNQSDYFAAAPENLAKGGCWNILNASSKGEPLCMFSSGGATGNVVADATEPTGIGYKYGGASSLDFSSYRIKLSKPKTGRYTIFFWMHHVNGSQSIQVENDGSAQAHALSVYHDQGDGWRLYRISSAARSDGIDDELTIFHRSPDSEFYLGAVWATPTKTALLPWVYPEEMIEAVSTDGIVATIPEALPVGGIIKNLAVSGNPGSSSWRKQSSTEIVETPSEVPKLKSRFYPEVTAPANVATPIARISVSGFNSQGSGEIEVFIRNTQSSPDFIGGSGYFRAALALLKDGDGGVLNENIQTFGAAWIQKNGGTTPPTFQLTQVDGNTWDVEVVTPAGVGDSIVSSKVRLFDLGGDFTFDDLP
Physico‐chemical
properties
protein length:868 AA
molecular weight: 94619,58700 Da
isoelectric point:4,86658
aromaticity:0,11175
hydropathy:-0,30530

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
UKH48608.1
1 868 aa
Domain Start End Length (AA) Confidence
N-terminal 1 96 96 0,9872
Central domain 97 521 426 0,6884
C-terminal 522 868 346 0,9200
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Vibrio phage vB_ValP_FGH [NCBI] · taxon 2911663
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Vibrio alginolyticus [NCBI] · taxon 663
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
UKH48608.1 [NCBI]
Genbank nucleotide accession
OL762410.1 [NCBI]
CDS location
range 29368 -> 31974
strand +
CDS
ATGGCAGTCGCAATTATCGGCCCTAAGTTTTACGCTTGGGACAGAAACGGCAAACCGCTGGCCTTTGGTAAAGTTTACACCTATCAGGCTCGCACCAATAACCCAAAGGCAACGTACCAGTCTGAAGACGGTATTGTTGAAAATACCAACCCGGTCATTCTTAACGGTGAAGGCTACGCCAACATTTACCTTGATGGCTCTTACAAGGTTGTGGTCAAAGACTCTGATGATAACGAGATCTGGACTGCTGACCCTGTTACAAGTGCTCAAGCTGAAGAGTGGGTGAATTGCTTGGCTGCTGAATACGTCAGCACCACAGTATTCCGTGTTAATGGTAGTTTCACCGACAAGTATGAGGCTGGTCGCCGTGTTCGTATTGACAACAACACCGCCGAGTATGCTTATTCAACCATCATCGACTCAAGCTTTGCCGCAGGGCAGACAAGTGTAACCATTTCTGATGCCGTTATCACAACTGGCATTCAGGGGGTTTGCGTGTCGATCGTCGGCAACGAATCAACTGGCAATGTTTCTGTTGAAAACGTAACTCAGCTTATTGCCTCTCAGTTCAATCCGGGCCAAGCCGTGAAGGTGAAAGGTTACTATGTTGCTGGTGATGTTGGTGATCTTAACTACTTGATTTACTCGCTTCAGGGTTATCGTGATTACCTTGGCGATCAGGCTTGGAACCCTGACGATGCTGGCGATCACTTGCTCAGCAATGGCAATGTGGCAATTCTTCAGCGAGACTCTGATCATGTTTCATTGCTGAAGCTTGGCTTTACCAATGACGCAATCACTGATGAGCTTTGGGATAAGGCAAAAGCCTATGCCGATTATTACAAGATTGCTTGGGGGCTTTCAGATATTGAATGCACCATTAGCTCAACCCGTGAGCTGCCTCAATATGGTTTGGTTGGCGCAGGTCAGATCACTGGCGATATTGTTAAAGTCACCCGCAACCGTGAGAAGTTCCACCAGCGCGGTGGTCGATTCGTGTGCTCTACCTTTTGGGTTTCAGGTGCTCAATACATCAAGACAGAATGGATTTGGGCTCAAACCAAGTTCCTGTTCGATGGTAACGCTCCTGACTATGGCGTCTTTTGGTGCTCATTTGGTAAGCACCAAGGCGATCACGAAGTCGATTTGAATAAAGGCCAGTCACTAAACGAGTGTAATTTCCAGTTTATTCGTGGCGGCTTCCATGTTTACGGAAGCAAAGACAACTATGTTGGCCCCGGCACTCCTTTCGATGAGTTCAACTTGAACGCCATTGAAATGATTGACACCACTGGCGCAGATATTACAGCAGAAGACGGCACAACTGGCTGGCATGTTCTTAACGAGTCACGAAGCAACCAGCACAACACTATTCGCCAATGGTACGCAGAAGGATCAGCTAACCGATCTATTCGTGGCCGCTGGCATGTTCTTATGGCCTATGTTGATAGCCCTGCAAACTCGCCTTACGCGCTGCCGGCAACAAGCCATGTTCTTTTCAACCCTGACAACTCAGTTCGTAACCAGTCTGATTACTTTGCGGCTGCTCCTGAGAACTTGGCTAAAGGTGGCTGTTGGAACATCTTGAACGCCAGCAGTAAAGGTGAGCCGCTTTGTATGTTTTCCTCTGGTGGCGCTACTGGCAATGTTGTTGCTGATGCCACTGAGCCTACCGGGATCGGTTACAAGTACGGCGGCGCGAGCTCGCTTGATTTCTCTTCATATCGAATTAAGTTGAGCAAGCCCAAGACCGGACGTTACACGATCTTCTTCTGGATGCACCACGTTAACGGTAGCCAGTCGATTCAGGTTGAGAATGATGGTTCTGCTCAAGCTCACGCACTGAGCGTTTATCATGATCAAGGGGACGGGTGGCGCTTGTATCGGATCAGTTCAGCCGCTCGAAGTGATGGTATTGACGATGAGTTAACTATCTTCCACCGCTCGCCTGACTCTGAGTTTTACCTTGGCGCTGTTTGGGCTACACCAACGAAGACCGCACTTCTTCCTTGGGTTTACCCTGAAGAAATGATTGAGGCCGTGTCTACTGATGGTATTGTTGCGACAATTCCAGAGGCGCTACCTGTTGGCGGTATTATCAAGAATCTTGCGGTTTCTGGTAATCCGGGATCTTCATCATGGCGCAAGCAAAGCTCAACCGAGATTGTTGAAACGCCTTCTGAGGTTCCAAAGCTGAAGTCACGCTTTTATCCAGAGGTTACGGCCCCGGCTAATGTGGCGACACCTATCGCAAGAATTTCAGTGAGTGGGTTCAACTCTCAAGGTTCTGGCGAGATTGAAGTGTTTATCCGAAATACTCAGTCTTCGCCTGATTTTATTGGTGGCTCTGGTTACTTCCGCGCTGCTCTTGCTTTGCTCAAGGATGGTGACGGCGGCGTTCTTAATGAAAACATTCAGACTTTTGGTGCTGCTTGGATTCAAAAGAATGGCGGGACTACGCCGCCAACCTTCCAGTTGACTCAGGTTGACGGCAATACTTGGGATGTTGAGGTGGTTACGCCTGCTGGCGTTGGTGATTCTATTGTTAGCTCAAAGGTTCGATTGTTCGACCTTGGCGGCGACTTCACCTTTGATGACTTGCCTTAA

Genome Context

Tertiary structure

UKH48608.1
ESMFold2 structure
Source ESMFold2
pLDDT 67.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete sequence of phage Podoviridae sp. vB_ValP_FGH Wang,P. and Wang,X. 2012-12-15 — GenBank