Protein

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Genbank accession
GENB_6de8672f276e [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFVRMFDYGNEAPTNSGRFKIYSSDSMYLHDTYTDKLYASSATNWGTGTGVASSKFILCAENVKRVLLEDNSSDCQLYEEKGTGKVFITGNTKAFTGVTDRKTLWTDCTTWITSSGINVSDIKYMSSFYDMKVNLITNDGTLYCCGANNISNISSFGDGTNINSFNTFKRVDTITSVKKAVGNIYLREDNTLWGCGFNYYYQLGTGNQTSITGVTMISSDVIDFNVSYQSTFFIKSDNNLYACGKQFGAQYGNEFGTGGTSSSTDIQYKTPTLLSAGVYSLYTCVGNMASHIVKGDEVLYASGSNSSGQLGVGNNNNQYSYTPSYTSFNTSCNLVRTPSGSLILTDTGKLYYCGLAIVVMGGISGQNVLNYTEVDMSFLQ
Physico‐chemical
properties
protein length:382 AA
molecular weight: 41674,90740 Da
isoelectric point:5,12014
aromaticity:0,12565
hydropathy:-0,20995

Domains

Domains [InterPro]
DC_0436
RBD
2–105
DC_0436 IPR009091
DC_0918
STR
75–225
DC_0918 DC_0436
IPR009091
STR
86–359
IPR009091
IPR051553
Unmapped
137–320
IPR051553
GENB_6de8672f276e
1 382
Architecture
RBD
STR
RBD
RBD 2-74 | STR 75-366 | RBD 367-382
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_6de8672f276e
1 382
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1665
Central domain 11 208 199 0,4184
C-terminal 209 382 173 0,6545
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-208
C-terminal
209-382

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ECO103 4-12-1
[NCBI] 		3113829 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OR844650.1_CDS_[327436..328584] [NCBI]
Genbank nucleotide accession
OR844650.1 [NCBI]
CDS location
range 327436 -> 328584
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
a50d78f0423b79db5c3ae16d6138c8f61f59b2c63e1c679291b0fbc2f5f397b2

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,8608
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50