Phage RBP Database

Genbank accession

YP_004508556.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,76

Seq2Symm

C1 confidence 0,988

C1	0,988
C2	0,077
H	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAYPIDPNSAAFAPYVGSLSTTNPVADSDDLYVSSVGIAIRRWKDKAGTRFWDELLVPFEVQTPPSVYTDATAPLGGTGPQYPVYNPVLGGQVTVAVAPGSVAEDGAPNLVFTFSRNTSSRNVLTVNYNITGTATNGVDYETIGNSVTFAEGAATATVVVNPIADAGVEPNETVILTIVPNGAYTIGTPNSATGTITNDDA

Physico‐chemical properties

protein length:	201 AA
molecular weight:	20792,69350 Da
isoelectric point:	4,05003
aromaticity:	0,08458
hydropathy:	0,02239

Domain architecture

YP_004508556.1

1 201 aa

ATT 90–200 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR038081
ATT

IPR038081

IPR038081
ATT

IPR038081

IPR003644
ATT

IPR003644

YP_004508556.1

1201 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR038081	ATT	IPR038081	90	200	Merged direct domain	CalX-like domain superfamily	N-terminal	Low	Positional only	110 proteins / 110 hits
IPR038081	ATT	IPR038081	91	200	Merged direct domain	CalX-like domain superfamily	N-terminal	Low	Positional only	110 proteins / 110 hits
IPR003644	ATT	DC_0810	116	200	InterPro cluster	Na-Ca exchanger/integrin-beta4	N-terminal	Low	Positional only	48 proteins / 48 hits

Proteins with similar domain architecture

Phage

Synechococcus phage S-CRM01 [NCBI] · taxon 1026955

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Synechococcus sp. [NCBI] · taxon 1131

cellular organisms Bacteria Bacillati Cyanobacteriota/Melainabacteria group Cyanobacteriota Cyanophyceae

Genbank protein accession

YP_004508556.1 [NCBI]

Genbank nucleotide accession

NC_015569.1 [NCBI]

CDS location

range 97721 -> 98326
strand -

CDS

ATGGCATATCCAATTGATCCAAATAGTGCTGCCTTTGCACCATATGTTGGATCCCTATCAACAACCAATCCAGTAGCTGATTCAGACGATCTATATGTTTCGTCAGTTGGTATCGCAATCCGTAGATGGAAAGACAAAGCAGGTACTAGATTCTGGGATGAACTATTAGTTCCTTTTGAGGTCCAGACTCCACCATCTGTATACACCGATGCAACGGCACCTCTTGGAGGCACTGGTCCTCAATATCCAGTGTATAATCCTGTTCTCGGGGGACAAGTAACTGTAGCGGTGGCTCCTGGATCTGTTGCTGAGGATGGTGCTCCTAATCTAGTGTTCACATTCAGTAGAAACACATCTTCTAGAAATGTTCTGACTGTAAATTACAATATTACTGGAACTGCTACTAACGGTGTAGATTATGAGACTATCGGAAACAGCGTGACTTTTGCAGAGGGTGCAGCTACGGCTACTGTTGTTGTTAATCCAATCGCTGATGCGGGCGTTGAACCAAACGAGACTGTAATTTTAACCATCGTTCCTAACGGGGCATATACAATCGGAACACCTAATTCTGCTACAGGTACAATCACTAACGACGACGCTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)