Protein

View in Explore
Genbank accession
YP_004508556.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYPIDPNSAAFAPYVGSLSTTNPVADSDDLYVSSVGIAIRRWKDKAGTRFWDELLVPFEVQTPPSVYTDATAPLGGTGPQYPVYNPVLGGQVTVAVAPGSVAEDGAPNLVFTFSRNTSSRNVLTVNYNITGTATNGVDYETIGNSVTFAEGAATATVVVNPIADAGVEPNETVILTIVPNGAYTIGTPNSATGTITNDDA
Physico‐chemical
properties
protein length:201 AA
molecular weight: 20792,69350 Da
isoelectric point:4,05003
aromaticity:0,08458
hydropathy:0,02239

Domains

Domains [InterPro]
IPR038081
91–200
IPR038081
IPR003644
116–200
IPR003644
YP_004508556.1
1 201
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CRM01
[NCBI] 		1026955 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004508556.1 [NCBI]
Genbank nucleotide accession
NC_015569.1 [NCBI]
CDS location
range 97721 -> 98326
strand -
CDS
ATGGCATATCCAATTGATCCAAATAGTGCTGCCTTTGCACCATATGTTGGATCCCTATCAACAACCAATCCAGTAGCTGATTCAGACGATCTATATGTTTCGTCAGTTGGTATCGCAATCCGTAGATGGAAAGACAAAGCAGGTACTAGATTCTGGGATGAACTATTAGTTCCTTTTGAGGTCCAGACTCCACCATCTGTATACACCGATGCAACGGCACCTCTTGGAGGCACTGGTCCTCAATATCCAGTGTATAATCCTGTTCTCGGGGGACAAGTAACTGTAGCGGTGGCTCCTGGATCTGTTGCTGAGGATGGTGCTCCTAATCTAGTGTTCACATTCAGTAGAAACACATCTTCTAGAAATGTTCTGACTGTAAATTACAATATTACTGGAACTGCTACTAACGGTGTAGATTATGAGACTATCGGAAACAGCGTGACTTTTGCAGAGGGTGCAGCTACGGCTACTGTTGTTGTTAATCCAATCGCTGATGCGGGCGTTGAACCAAACGAGACTGTAATTTTAACCATCGTTCCTAACGGGGCATATACAATCGGAACACCTAATTCTGCTACAGGTACAATCACTAACGACGACGCTTAA

Tertiary structure

PDB ID
936222df121c2add28e306a20c00396f61cf0ece84fb29432aca38edeb11ea6c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7108
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50