Protein

View in Explore
Genbank accession
AGN34113.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,99
Seq2Symm
C3 confidence 1,000
C3 1,000
D3 0,022
C1 0,009
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MFESLRSKGGGVVFFTPGRTYWIDFIQFVPSNVVIIGYGATLKQINPLSMYGRGGFVFGSSREWNYQKAKTAYLANSYPASVSDSSMPELSLGSYLRDNQSYLQCERCTVYGLRMETKFTDSTYWGGYAFNTVNAQHIRFYDVKGSGWTQLFNFGNDSSASSPSCDDVYAFNSTVESADLVRSYYAIGFIANSTNCGFDTAVLLKPMTVDSINGSGAATNYTENCVIRNINIPDLGLTSSSEGVLLNNSKGCLIENIDIRNCKNVVSTYYTVGSYNDTAKPNILRNISGQGVNIIAIRSKYAHIESFEGVGTYTNEVQFANNNASGNTINKKPKSIGFGGTNLQSWFLTNNTVKGLSRKYFYIRPSEILLNDKVDTFSWNENKLVATKSGVNLYFMWRVPDDINAIDDIRAFIRFNTAVDQDASVAGSTVEASLIQMVAFDGNIGETPYVAFSNSKIATAGVEDTTVVTQMGSNVPGLVYMDDTTHGLSYSWYVLFKMTNNVNNNYMKEIRVAGYN
Physico‐chemical
properties
protein length:516 AA
molecular weight: 56991,11200 Da
isoelectric point:5,79317
aromaticity:0,12597
hydropathy:-0,19826

Domains

View on InterPro
Domain architecture
AGN34113.1
1 516 aa
STR 4–361 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
AGN34113.1
1 516 aa
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0125
Central domain 11 360 351 0,9949
C-terminal 361 516 155 0,9351
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Aeromonas phage pIS4-A [NCBI] · taxon 754050
Uroviricota Caudoviricetes Roufvirus
Host No host information

Coding sequence (CDS)

Genbank protein accession
AGN34113.1 [NCBI]
Genbank nucleotide accession
JF974294 [NCBI]
CDS location
range 36890 -> 38440
strand +
CDS
ATGTTTGAAAGTTTAAGATCGAAAGGCGGCGGTGTCGTATTCTTTACTCCTGGTAGAACATACTGGATTGACTTTATTCAGTTCGTACCAAGTAACGTTGTTATAATTGGCTACGGCGCTACATTAAAGCAAATAAACCCTTTATCAATGTATGGACGCGGTGGTTTTGTGTTTGGTAGCAGTAGGGAATGGAACTATCAAAAAGCTAAAACGGCATATCTTGCAAACTCCTACCCTGCATCTGTATCTGATTCATCAATGCCTGAGTTGTCTTTAGGTTCATATTTAAGGGATAACCAATCATATTTACAGTGTGAAAGATGTACTGTGTATGGTTTGCGTATGGAAACAAAATTTACAGATTCTACATATTGGGGTGGTTATGCATTTAATACAGTAAACGCGCAACACATCAGATTTTACGATGTTAAAGGAAGTGGTTGGACACAGCTATTCAATTTCGGTAATGATAGTTCCGCATCATCACCATCTTGTGATGATGTATATGCATTCAACTCAACAGTAGAAAGCGCAGATCTTGTTCGTTCTTACTATGCGATTGGTTTTATAGCCAACTCTACAAACTGTGGTTTTGATACAGCGGTTCTTCTAAAACCAATGACAGTTGATAGCATTAATGGGTCTGGTGCAGCAACAAACTACACTGAAAACTGCGTAATCAGAAATATAAACATACCAGATTTAGGGTTAACTTCATCATCTGAAGGTGTTTTATTAAATAACTCCAAAGGTTGTTTAATAGAAAATATTGATATCAGGAATTGTAAAAACGTAGTTAGTACATACTATACCGTCGGTTCATACAATGACACTGCAAAACCTAATATTTTAAGGAATATTAGTGGTCAAGGCGTTAACATTATAGCAATCAGGTCTAAATATGCACACATTGAATCATTTGAAGGAGTAGGTACATACACGAATGAAGTTCAATTTGCAAACAACAATGCATCAGGCAATACCATAAATAAAAAACCAAAATCAATTGGTTTTGGTGGGACTAACTTACAGTCATGGTTTTTAACAAATAATACGGTAAAAGGATTGTCGCGAAAATATTTTTATATTCGGCCATCCGAAATTTTGTTGAACGATAAAGTAGACACTTTTTCATGGAATGAAAATAAACTTGTCGCAACAAAATCAGGAGTAAATCTTTACTTTATGTGGCGAGTTCCTGACGATATCAATGCAATTGATGATATTCGCGCTTTTATTCGTTTTAACACTGCCGTAGATCAAGATGCTTCTGTTGCTGGATCTACAGTAGAGGCAAGTTTGATACAAATGGTCGCTTTCGATGGTAACATTGGTGAAACACCATATGTTGCTTTTTCAAACAGCAAGATTGCAACAGCGGGTGTAGAAGACACAACGGTAGTAACGCAAATGGGTAGCAATGTACCAGGTTTGGTTTATATGGATGATACTACACATGGTTTATCCTATAGCTGGTATGTGCTGTTTAAAATGACAAATAATGTCAACAATAACTACATGAAAGAAATCAGAGTAGCGGGGTATAACTAA

Genome Context

Tertiary structure

AGN34113.1
ESMFold structure
Source ESMFold
pLDDT 65.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Genome Sequence of Aeromonas phage pIS4-A Henn,M.R., Wolf,A., Jost,G., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank