Protein

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Genbank accession
URG13985.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADNFSGIKISQLDDPNRINDNDIIPFTNDDMGDKQTRKIKLSALRDQLNYDNAFLTVQEGLANTIPGQIFHVYVDDTQLEVYAYLNSNGAAEIVQDAQGNPFKGQTAKALDFIRGELGLTMIGHVSSFARLREIKPPFEGAIVELLGWNEGSTYGGGRFQGNLSTGADDNGIVAAGDGFQWRRINVDEGINPEWFGYVNGSGNDVSTTLKQAIAQAVNLKRPVVFRDGAQMSLAVAGIEIPVGVDLTVANGGRAYFEITHEIETTGQFLVKSKNRISGLVFNYPKQTKDINAKPIVRYGPIFVGAGFYSSFTGINVGNAYYGFKIGGNDEGSASYITMKDINGAPIYRGISLDRVLDIPRISDIHWNYNMYLNSDQDYAPSLKQWIHENGEAFHFGRVDFAEVQRIFAFGYSKGIFLRGERYAGSADSIRFTGCDMDICVNPIYAQNFSGQLVIRNGKFTGNGNNLNGLTAPANGCFNYFQRVSPYARVILDSVTMNNYDRDAIRTGNDTVISNSKIYSYGLDKQQRAAVAIITDSNASLTVDACYFDATGQQNRGITGISTTGQLLITNGTQILNASLEGYRWLTGFALVEEGCRIDGPSRNINTFITNVRRTMYTDNLPTAGGGWIRGDKAMLTNPGIGTQATQGTYTILGWIRITASNAEGTNHVLGVDWLEIRSQIEPVPKFSSAGSVRPAVTAIGYYFFDTTLGKPIYLKSANPAVWVDGNGNPV
Physico‐chemical
properties
protein length:731 AA
molecular weight: 79911,53960 Da
isoelectric point:5,49027
aromaticity:0,10670
hydropathy:-0,23694

Domains

Domains [InterPro]
DC_1164
ATT
4–117
DC_1164 IPR059934
DC_0941
STR
168–731
DC_0941
URG13985.1
1 731
Architecture
ATT
RBD
STR
ATT 4-117 | RBD 126-167 | STR 168-731
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG13985.1
1 731
Domain Start End Length (AA) Confidence
N-terminal 1 205 205 0,9943
Central domain 206 611 407 0,9930
C-terminal 612 731 119 0,9875
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-205
Central
206-611
C-terminal
612-731

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage vB_ParM-25
[NCBI] 		2939654 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG13985.1 [NCBI]
Genbank nucleotide accession
ON375847.1 [NCBI]
CDS location
range 28666 -> 30861
strand +
CDS
ATGGCCGATAATTTCAGCGGTATTAAGATTAGTCAGTTAGACGATCCTAATCGTATTAACGACAACGATATCATCCCGTTCACTAACGATGACATGGGCGATAAACAAACACGTAAAATAAAGTTAAGTGCCCTACGTGATCAGCTCAATTACGATAACGCTTTCCTAACCGTGCAGGAAGGTTTAGCCAACACTATCCCAGGACAGATCTTCCACGTATACGTTGACGACACTCAGTTAGAAGTCTACGCGTACCTTAACAGTAATGGTGCAGCAGAGATCGTCCAAGATGCGCAGGGTAATCCTTTTAAAGGACAAACCGCCAAAGCGCTGGACTTCATTCGTGGTGAGTTAGGACTTACCATGATCGGTCACGTAAGTTCCTTTGCACGACTGCGCGAAATCAAACCTCCTTTCGAAGGTGCTATTGTAGAACTTCTGGGTTGGAACGAGGGCTCCACTTACGGCGGTGGTCGTTTCCAAGGCAATCTGTCTACGGGAGCTGACGACAACGGTATTGTTGCGGCAGGCGACGGTTTCCAATGGCGTCGCATTAATGTCGACGAAGGCATTAACCCAGAGTGGTTCGGTTACGTGAATGGTTCAGGTAATGACGTATCCACTACGTTGAAACAAGCCATTGCTCAGGCGGTTAACCTGAAACGTCCTGTTGTATTCCGCGATGGGGCTCAAATGAGTCTAGCGGTAGCAGGGATTGAAATTCCAGTAGGCGTTGATCTTACTGTGGCTAACGGTGGGAGAGCTTACTTTGAAATCACTCACGAAATCGAAACAACCGGACAGTTCCTTGTCAAAAGTAAAAACCGAATCTCCGGACTTGTCTTCAACTACCCGAAACAAACGAAAGACATCAATGCTAAGCCGATTGTGCGTTACGGACCTATTTTTGTCGGTGCTGGATTTTATTCTTCTTTCACGGGAATAAACGTAGGTAACGCATACTACGGATTTAAGATCGGCGGTAATGACGAAGGCTCCGCATCGTACATCACGATGAAAGACATTAACGGCGCCCCTATCTATCGTGGAATTTCACTTGACCGCGTTCTGGACATCCCTCGTATTTCTGATATCCATTGGAACTACAACATGTACCTGAACTCCGATCAGGACTACGCACCATCTCTGAAACAGTGGATCCATGAGAATGGTGAGGCGTTCCATTTTGGTCGTGTTGACTTTGCTGAGGTACAACGTATCTTTGCATTCGGGTACAGTAAAGGTATCTTCCTGAGAGGTGAGCGTTATGCGGGGAGCGCTGATTCCATTCGCTTCACGGGTTGCGATATGGACATCTGTGTTAACCCTATCTACGCTCAGAACTTTAGTGGTCAGTTAGTTATTCGTAACGGTAAGTTCACGGGTAACGGTAATAACCTGAATGGGTTGACTGCGCCGGCTAACGGTTGTTTCAACTACTTCCAACGCGTGTCTCCGTATGCACGAGTCATCTTGGATTCAGTTACCATGAACAACTACGACCGCGATGCTATTCGTACGGGTAACGACACGGTCATCAGTAACAGTAAGATCTACTCTTACGGCTTGGACAAACAGCAACGTGCAGCAGTAGCTATCATTACCGATAGCAATGCGTCGTTGACTGTAGATGCTTGTTACTTCGATGCTACTGGTCAACAGAACCGCGGCATTACAGGTATCAGTACTACCGGTCAGTTGTTAATCACTAACGGTACTCAAATCCTTAACGCTTCGTTAGAAGGGTATCGTTGGTTAACCGGTTTTGCGCTAGTTGAAGAAGGTTGTCGTATCGATGGTCCATCTCGTAACATCAACACGTTCATCACCAATGTCCGTCGCACTATGTACACGGATAATCTCCCTACCGCAGGCGGTGGATGGATTCGCGGCGATAAAGCGATGTTGACTAACCCCGGTATCGGTACCCAGGCAACCCAGGGCACCTACACTATCCTGGGCTGGATACGCATCACTGCCTCTAATGCCGAAGGTACCAACCACGTATTAGGTGTTGACTGGTTAGAGATCAGATCTCAAATTGAACCTGTCCCTAAGTTCAGTTCAGCAGGTAGCGTACGACCAGCGGTAACTGCCATTGGCTATTACTTCTTCGACACCACATTAGGTAAACCAATTTATCTCAAATCTGCTAACCCAGCTGTTTGGGTTGATGGCAACGGTAACCCTGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
838397e48c1e7cbbde3cd4e91f0bc646962ad2317632a7d9dc531138b7f0e369
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8085
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50