Phage RBP Database

Genbank accession

WPJ56192.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,76

TSP

Evidence RBPdetect2

Probability 0,62

Seq2Symm

C3 confidence 0,999 truncated

C3	0,999
C1	0,026
C6	0,000

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADQNLKQIQFKRTSTENKAPGADIVARGEIALNTHGRTLAIYTKDEADNVVQLAGKGVPFLDTAGNLNVDGTTTLKDNVTISPNKAINFEASDLSGALVRHITGKCANNDGWYIGAGGASDQGFLEIGTYDNGNEPIYFVQRTGGTTQAEVRRLALLDGFGDTSIPGDLRLTGKTVKISNGSTLTLEMGVGANDAYIKNLRGTGVLQLTNDSNLTFRNSQVYYAMNGRGPGKSGTLLTNVENNRQAWQYTISAATASTARWVKVATIKHPGMASSQLDLMISGGIDSGQGKHYVDFITLSGRNLTSWSTNNLDNWVEWRRIGSPSKGNVPEYYVVKNDAATDADASFDFYAKVPRYSNDLYVTVLNTSGYNGQSSGSVIIYETGQDTGATGPTGSILVSMKQIFDSYAKPDFGDTTGTLPVNRGGTGATNVGDARNNLGLRTAAVRDVGESSGNVMEVGAFGVGGNGKSLVDITSDVDLMTRLKALGGTVFRANTASGYTGAPYYSHGTGFYGRASDTMAALNIDYATGNVRVFAINDSGLASGRVNSNVLYGTANKPSKADVGLGNLTNDTQVKKAGDTMTGDLTVPNLHASGTGTASVYVNAGSGNAHVWFRTDGNERGVIWATPNTADLGQINIRAKTTGGTSAGDFSFRSDGRLDVPVAVKVGGAAMLTKDGNITSGSMFGGNLNNYLTSIKNDIVAGDNKQVSKTGDTMTGNLTINANLKVENPNGTFVDLGSENSDKYSRLTLARKVGDGAAVAMLKITPEGYVQFGYQTAVANPSPTKYIRVKPDGLDVEGDLVFNQTYRGTEEAVDISDKTIDLNNLVIKRTDPGTRQLYKCVSSGGGSKIANKPTSDGNFVLEVLSLRKVSDNDWTCKQTFTTKNNTTVGTYVRYAQNGSWTAWEEVVSGVQPINLGGTGATSVAAARNNLGVGEGQTVSFGNLVTNDLTVNGNARLVGRLNLGSTSATGVLRANETGAVVLGSASGQNIHVRAGSADTSAGETRFEPNGNVLVGGAITVSGSLQVNGEAAMSRSLIVSQNIKNTNDNSFILMGKDSDLGFVKKSNSGAKLVFASGKSFIVAKSSATVIANPASETYTDVFKVDADGNQTVYGNSAVSRALTVSSTATVNGVINANGGIIVPTTKYVQIADAPTQNNQATNKKYVDDKVASAISNAGDTYLPLAGGTVTGRLTITGDQLKTTSLWTTGDAAVNGVLTVDGKARFNQEFSVSTSVNVQNDGNSHVFFRKANGTEKGLIWADDPGNVSIRSAGVSGPVWNFWNSGSCQFPGAISNYNGISSTTNYPGGNKNDYLNTAGLVSRFSNGAYASLYFQEYVGNYHQAILNVNGYGQDNSFYFRAGGDFFCTRNGSFDNVEIRSDRRAKSDIKVIENALEKVETLSGNTYELHNTSGGTTRSAGLIAQEVQEVLPEAVTQDNEEDGGMLRLNYNSVIALLVESVKELSAEVKGLKAEIEELKSK

Physico‐chemical properties

protein length:	1477 AA
molecular weight:	155677,44760 Da
isoelectric point:	5,96670
aromaticity:	0,07380
hydropathy:	-0,30934

Domain architecture

WPJ56192.1

1 1477 aa

STR 820–907 · CHP 1377–1471 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

cd19958
STR

cd19958 IPR030392 Coil

IPR030392
CHP

IPR030392

WPJ56192.1

11477 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1942
ATT

DC_1942 DC_0246

DC_1159
STR

DC_1159

WPJ56192.1

11477 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
cd19958	STR	DC_0464	820	907	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
IPR030392	CHP	DC_0088	1377	1432	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	1377	1471	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	1450	1477	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WPJ56192.1

1 1477 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	362	362	0,0907
Central domain	363	586	225	0,2588
C-terminal	587	1477	890	0,6111

Note: Constraints were applied during segmentation.
Fixed 15 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Klebsiella phage RCIP0102 [NCBI] · taxon 3094270

No lineage information

Host

Klebsiella pneumoniae [NCBI] · taxon 573

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

WPJ56192.1 [NCBI]

Genbank nucleotide accession

OR532896.1 [NCBI]

CDS location

range 58082 -> 62515
strand +

CDS

ATGGCCGATCAAAACTTAAAACAAATACAATTTAAAAGAACTAGCACAGAGAATAAAGCACCAGGTGCAGATATCGTAGCCCGTGGCGAAATCGCGTTGAATACACATGGGCGTACTCTTGCCATTTACACTAAAGATGAAGCCGATAACGTTGTTCAGCTTGCCGGTAAAGGTGTTCCTTTCTTAGATACTGCAGGTAATCTTAATGTTGATGGAACTACTACGTTAAAAGACAACGTTACTATTTCTCCGAATAAAGCGATCAATTTTGAAGCTTCAGATTTAAGCGGAGCATTAGTACGTCATATCACCGGTAAGTGTGCTAATAATGATGGCTGGTACATTGGAGCTGGCGGTGCATCTGACCAAGGATTTCTTGAAATCGGTACGTATGATAACGGAAATGAACCTATCTATTTTGTTCAAAGAACCGGTGGAACGACTCAAGCTGAAGTTCGTCGTTTAGCATTATTAGATGGGTTTGGCGATACCTCTATACCTGGGGACCTTCGTTTAACTGGTAAAACAGTAAAAATTTCAAACGGCAGCACTCTTACTTTGGAAATGGGTGTAGGCGCTAATGACGCGTACATTAAAAACCTGAGAGGAACCGGTGTTCTTCAATTAACCAATGACAGTAACCTTACGTTCAGAAATTCACAGGTTTATTACGCCATGAACGGAAGAGGTCCTGGTAAATCCGGTACTCTTCTGACAAATGTAGAAAACAATCGTCAGGCATGGCAATATACTATTTCTGCTGCAACTGCGTCAACTGCTCGCTGGGTAAAAGTAGCTACAATAAAGCATCCAGGAATGGCTTCTTCACAGCTGGATTTAATGATTAGCGGTGGTATTGATTCTGGACAGGGTAAGCATTATGTTGATTTTATTACATTATCTGGCCGTAATTTAACATCTTGGAGCACTAACAATTTAGATAACTGGGTTGAATGGCGCAGAATTGGTTCTCCTTCTAAAGGAAACGTTCCAGAGTATTACGTTGTTAAAAATGATGCCGCTACTGATGCGGATGCTTCATTTGATTTTTACGCTAAAGTTCCTCGATATTCCAATGACCTTTATGTCACAGTACTAAACACTTCTGGGTATAATGGACAAAGCTCTGGTAGTGTAATTATCTATGAAACTGGTCAAGACACCGGTGCTACTGGACCGACTGGAAGCATTCTTGTTTCAATGAAACAAATTTTTGACAGTTACGCAAAACCAGATTTCGGTGATACTACCGGTACTCTTCCGGTTAACCGTGGTGGTACAGGTGCTACTAACGTAGGAGATGCCCGAAACAACCTGGGCCTTAGAACTGCGGCTGTTCGTGATGTTGGTGAATCCAGCGGAAACGTGATGGAAGTTGGTGCCTTTGGTGTCGGTGGTAACGGAAAATCACTAGTAGATATTACTTCTGACGTTGATTTAATGACTCGCCTTAAGGCTCTTGGTGGTACAGTGTTCAGAGCCAACACAGCGAGTGGTTATACCGGGGCTCCTTATTACTCCCATGGCACTGGGTTTTACGGAAGAGCTTCTGACACAATGGCTGCGCTTAATATAGATTATGCAACTGGCAACGTCAGAGTATTTGCTATAAACGATAGCGGTTTAGCAAGTGGAAGAGTAAATTCTAATGTTCTCTACGGCACAGCAAATAAGCCATCTAAGGCTGATGTCGGACTTGGTAATCTGACAAACGATACTCAAGTTAAGAAAGCCGGCGATACCATGACTGGTGATTTAACTGTTCCTAATTTACATGCTTCCGGCACTGGTACTGCATCAGTATATGTTAACGCAGGAAGCGGAAACGCTCATGTATGGTTTAGAACAGACGGTAACGAACGTGGTGTAATTTGGGCAACTCCAAATACAGCGGACTTAGGTCAGATTAATATTCGTGCAAAAACTACTGGAGGCACTTCTGCTGGTGATTTTAGCTTCCGTTCTGATGGCCGCCTTGATGTTCCTGTAGCAGTTAAAGTTGGTGGAGCAGCAATGCTAACCAAAGACGGTAATATTACCTCTGGTTCGATGTTTGGTGGTAACCTTAACAACTATTTGACTTCTATTAAAAACGATATCGTTGCTGGCGATAATAAGCAAGTAAGCAAGACTGGTGATACCATGACTGGTAACTTGACTATTAACGCTAACTTAAAAGTTGAAAATCCTAATGGAACGTTTGTTGATTTAGGTTCAGAGAACTCTGATAAGTATAGCAGATTAACCCTTGCTCGTAAAGTTGGTGATGGCGCTGCTGTAGCAATGCTTAAAATTACTCCTGAAGGATACGTGCAATTTGGTTATCAAACTGCAGTTGCTAATCCGTCTCCCACTAAGTATATCCGAGTTAAACCTGATGGTCTTGATGTAGAAGGGGATTTGGTTTTTAATCAGACCTATCGCGGCACTGAAGAGGCAGTTGATATTTCTGATAAGACTATTGACCTTAATAATCTTGTCATTAAAAGAACCGATCCAGGTACTCGTCAGCTGTATAAATGTGTATCATCTGGTGGCGGTTCTAAGATAGCAAACAAACCCACATCTGATGGTAACTTTGTTCTCGAAGTTCTGTCTTTACGTAAAGTTTCTGATAACGATTGGACATGTAAGCAGACCTTTACTACAAAGAATAACACCACTGTTGGCACATATGTTCGCTATGCCCAAAATGGCTCATGGACTGCATGGGAAGAAGTTGTATCTGGTGTTCAACCAATTAATTTAGGCGGTACCGGAGCAACTTCTGTAGCTGCTGCTCGTAATAACCTTGGTGTTGGTGAAGGACAAACCGTATCATTCGGTAATTTAGTTACAAACGATTTAACCGTAAATGGAAATGCTAGATTAGTTGGAAGACTGAACCTTGGTTCTACTTCTGCGACTGGCGTATTACGAGCCAATGAAACCGGCGCAGTTGTTTTAGGTTCTGCTAGTGGTCAAAACATTCATGTTAGAGCAGGAAGTGCCGATACTTCTGCTGGTGAAACTCGCTTTGAGCCAAATGGAAACGTTTTAGTTGGTGGTGCGATTACAGTCTCAGGAAGCTTGCAAGTAAATGGCGAAGCCGCGATGAGCAGAAGCCTGATCGTTTCTCAAAATATAAAGAATACCAACGATAATAGTTTTATTCTGATGGGAAAAGATTCGGATTTAGGTTTCGTTAAAAAATCTAACTCTGGCGCTAAACTGGTATTTGCTTCAGGAAAATCGTTTATTGTCGCTAAATCGTCGGCAACTGTGATAGCTAATCCGGCTTCGGAAACTTACACTGATGTGTTTAAAGTTGATGCAGACGGAAACCAAACTGTTTACGGAAATTCAGCAGTTTCTAGAGCTTTGACTGTATCAAGTACAGCTACAGTTAATGGTGTTATTAATGCCAATGGCGGTATTATTGTTCCTACTACCAAGTATGTACAAATTGCTGATGCTCCTACGCAGAATAACCAAGCCACCAACAAGAAATATGTTGATGATAAGGTTGCTTCTGCTATTAGTAATGCTGGCGATACTTATCTCCCATTAGCAGGTGGTACTGTAACTGGGCGGTTAACAATTACAGGTGATCAGTTAAAAACTACCTCTCTGTGGACTACCGGAGACGCTGCTGTTAACGGCGTTTTAACTGTTGACGGAAAAGCTAGATTTAATCAAGAGTTCAGTGTATCTACTTCAGTTAATGTTCAGAACGATGGTAATAGTCATGTGTTCTTCCGTAAAGCAAACGGCACAGAAAAAGGTCTTATTTGGGCTGATGACCCCGGTAATGTTAGTATAAGATCAGCCGGTGTTTCTGGACCGGTATGGAACTTCTGGAACAGTGGTTCTTGCCAATTCCCAGGTGCTATTAGTAACTATAACGGAATTAGCAGCACTACTAATTACCCTGGTGGTAATAAAAACGACTATTTAAACACGGCAGGATTAGTGTCTAGATTTAGCAATGGTGCTTATGCTTCGTTATATTTCCAAGAATATGTTGGGAATTATCACCAGGCTATTCTTAATGTCAACGGGTATGGCCAAGACAATAGCTTTTACTTTAGAGCTGGCGGCGACTTCTTCTGTACTCGCAACGGGTCATTCGATAACGTAGAGATTCGTTCTGACCGTAGAGCTAAATCTGATATTAAAGTTATTGAAAACGCTTTGGAAAAAGTAGAGACCTTAAGCGGTAATACTTACGAGCTTCATAATACTTCTGGCGGTACTACTCGTTCTGCTGGGTTGATTGCTCAAGAAGTTCAAGAAGTTCTTCCTGAAGCAGTTACTCAGGATAATGAAGAAGATGGCGGTATGCTTCGTCTGAATTATAACTCAGTAATTGCTCTTCTTGTTGAATCAGTGAAAGAACTTTCAGCTGAGGTCAAAGGTCTTAAAGCCGAAATTGAAGAACTTAAATCTAAATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)