Phage RBP Database

Genbank accession

WYA77462.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,99

Protein sequence

MADYKLSELNSIDTIRSDDLLHVRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMTGDLGIVKLLYGGKAVFDPTGSSEINIGDVLKTFKINANGLKLTIADASRSATVYHTLNKPSPNELGMRTNEENDARYSRLAVNNIFRGTQTILSDNEALIVKNNTQGMPLGIRGRDADGTSRWYFGNDNRDSNALVLSNVKTGVSIGILENLVSVNRTFQIAGQVQPSDWSNLDARYFTQTVANQRFAQLAGNNTFSGLNTFSTSVSVISNSAAIMLKNKSVNESLFILAKDVENNNLWYIGKGAANDTITFHDYKGNTSIDLNSSGATFNKTVKITGQVQPSDWTNIDSRYIPAATLSNLAKLNVSNTFTNTQTIIANNEGLIVKNLTQNQGLYIRGVDTANVSRWWLGVGGASSNVVALNNSFSGTQISLEQALVSVNKSLYINGQVQPQDWTNLDARYYVQSSADAKYIWSAVRETVRAEDGGVAWNKPSGIYLETLQGGGSNRLVSHMFVNTGASTPAAQLMFGYRNGGMWYRTARDAHGFEEDWSKVYTEAQKPTPSELGAYTKTETDQKIAQAVSDSTDLNKIYPVGIVTWFNSNVNPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVTLAVGNLPSHTHSFSATTSSFDYGTKNTNTTGAHTHSVSGSTSSAGHHNHAISWIGQNSTHYSGGGGGRIGTGPGYTDGGGDHTHSVSGTAGSAGNHAHSVGIGAHSHTVSGNTGGTGSGSAFSVTNQFYKLMAWVRTA

Physico‐chemical properties

protein length:	784 AA
molecular weight:	84212,03700 Da
isoelectric point:	7,84376
aromaticity:	0,08418
hydropathy:	-0,36645

Domain architecture

WYA77462.1

1 784 aa

ATT 159–248 · ATT 274–363 · ATT 383–472 · RBD 487–586 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:6.20.80.10
STR

G3DSA:6.20.80.10 G3DSA:6.20.80.10 IPR048388 IPR022246

IPR048388
ATT

IPR048388 IPR048388 G3DSA:6.20.80.10

IPR051934
Unmapped

IPR051934

WYA77462.1

1784 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1566
STR

DC_1566

WYA77462.1

1784 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:6.20.80.10	STR	G3DSA:6.20.80.10	157	219	Merged direct domain	G3DSA:6.20.80.10	Central	Low	Positional only	37 proteins / 37 hits
IPR048388	ATT	DC_0224	159	248	InterPro cluster	Tail fibre protein gp37, trimerization region	Central	Medium	Text match	404 proteins / 802 hits
G3DSA:6.20.80.10	STR	G3DSA:6.20.80.10	274	334	Merged direct domain	G3DSA:6.20.80.10	Central	Low	Positional only	37 proteins / 37 hits
IPR048388	ATT	DC_0224	277	363	InterPro cluster	Tail fibre protein gp37, trimerization region	Central	Medium	Text match	404 proteins / 802 hits
IPR048388	ATT	DC_0224	383	472	InterPro cluster	Tail fibre protein gp37, trimerization region	Central	Medium	Text match	404 proteins / 802 hits
G3DSA:6.20.80.10	STR	G3DSA:6.20.80.10	383	443	Merged direct domain	G3DSA:6.20.80.10	Central	Low	Positional only	37 proteins / 37 hits
IPR051934	Unmapped	-	388	756	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
IPR022246	RBD	DC_0194	487	586	InterPro cluster	Bacteriophage T7, Gp17, C-terminal	C-terminal	Low	Positional only	166 proteins / 166 hits

Proteins with similar domain architecture

Phage

Escherichia phage vB_EcoM_BL [NCBI] · taxon 3135017

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Escherichia coli K-12 [NCBI] · taxon 83333

Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Escherichia

Genbank protein accession

WYA77462.1 [NCBI]

Genbank nucleotide accession

PP481222.1 [NCBI]

CDS location

range 52635 -> 54989
strand +

CDS

ATGGCAGATTACAAGTTGAGTGAATTAAACTCAATCGACACAATCCGTTCAGATGACCTTCTTCATGTCAGGGTTAAAAAGAGACCTGAAATGTTAGGTGATGAAGACCGTCGAATGACCTATCAAGACTTCTTAGCATCTTTTAAACTAGAAAGATTTGTTCAGATTGCTGGCAGCACTATGACGGGTGACTTAGGTATTGTGAAGTTACTTTATGGTGGTAAGGCAGTCTTTGACCCAACAGGTTCTTCTGAGATTAATATTGGGGATGTTTTAAAGACTTTTAAAATCAACGCAAATGGTCTTAAACTAACTATTGCAGATGCTTCAAGGTCTGCAACTGTTTATCATACTCTGAATAAGCCAAGCCCTAATGAACTTGGGATGAGAACTAATGAAGAGAATGATGCAAGGTACTCAAGATTAGCTGTGAATAACATCTTTAGGGGTACTCAAACCATCCTATCTGATAATGAAGCACTTATTGTTAAGAATAACACACAGGGTATGCCACTAGGTATTCGTGGTCGAGATGCAGATGGAACTAGTAGATGGTATTTTGGCAATGATAATAGAGACTCAAATGCTCTTGTATTGTCGAATGTAAAGACTGGTGTTTCAATTGGTATTCTTGAAAATTTGGTGTCAGTCAACAGAACTTTTCAAATCGCTGGTCAAGTTCAGCCTTCTGATTGGTCTAACTTAGATGCTAGATACTTCACTCAGACAGTTGCTAATCAGAGGTTTGCGCAGTTAGCTGGTAATAACACTTTTAGTGGTTTAAATACATTCAGTACTAGTGTTAGTGTTATCTCTAATTCTGCTGCTATCATGTTAAAAAATAAGTCTGTTAATGAGTCTTTGTTCATCCTAGCAAAAGATGTTGAAAACAATAATCTGTGGTATATTGGTAAAGGTGCTGCAAATGACACTATCACATTTCATGATTACAAGGGCAACACCTCTATTGACTTAAACTCGTCTGGTGCTACATTCAACAAGACTGTAAAAATCACTGGTCAAGTTCAGCCTTCAGATTGGACTAACATTGACTCTAGATACATTCCAGCAGCTACTTTGAGCAATCTTGCTAAACTTAATGTGTCTAATACTTTCACAAATACACAGACTATTATTGCTAACAATGAAGGGCTGATTGTTAAGAATTTGACACAAAATCAAGGCTTGTATATTCGTGGCGTTGATACTGCGAATGTATCTAGGTGGTGGTTAGGTGTAGGAGGCGCTAGTTCTAACGTGGTAGCCTTGAATAACAGCTTTTCAGGCACTCAAATTTCTCTAGAGCAAGCATTGGTTAGTGTGAATAAGAGTCTGTATATTAATGGACAGGTACAACCACAAGACTGGACTAACTTAGATGCTAGATACTACGTTCAATCTTCAGCAGATGCGAAGTACATCTGGTCAGCAGTCAGGGAGACAGTAAGAGCGGAAGATGGTGGTGTAGCTTGGAATAAACCTTCAGGAATCTATCTTGAGACGCTTCAGGGTGGTGGGTCAAACCGTTTAGTCTCACACATGTTCGTTAATACGGGAGCATCAACACCTGCTGCACAATTGATGTTTGGTTATAGAAATGGTGGGATGTGGTACAGAACAGCCAGAGACGCACATGGTTTTGAGGAGGATTGGTCTAAGGTTTACACAGAGGCTCAGAAACCAACCCCTTCAGAGCTTGGTGCATACACTAAAACAGAAACTGACCAGAAGATTGCACAGGCAGTAAGTGACTCTACAGACCTTAATAAAATCTATCCAGTAGGTATTGTAACGTGGTTTAACAGTAATGTTAACCCTAATACAGCACTGCCTGGTCTAACTTGGACGTACCTCAACAATGGTGTTGGTAGAACTATCAGAATTGCAGCAGCAAACGGTTCAGATGTTGCTACAACTGGTGGTTCAGACTCTGTGACGTTAGCTGTTGGGAACTTGCCTTCACACACTCACAGTTTTTCTGCTACAACTTCATCTTTTGACTACGGAACAAAAAACACTAACACGACTGGTGCTCACACTCACTCTGTAAGTGGCTCTACTTCATCTGCTGGTCACCACAACCACGCTATCTCGTGGATTGGTCAGAACTCTACACACTATTCTGGTGGTGGTGGTGGTAGAATCGGTACAGGTCCGGGTTACACTGATGGGGGTGGTGACCACACCCACTCTGTAAGTGGTACTGCTGGTTCTGCTGGTAACCACGCTCACAGTGTTGGTATTGGTGCTCACAGTCATACAGTTAGTGGTAACACTGGTGGTACAGGTTCTGGTTCCGCATTTAGTGTTACTAACCAGTTCTATAAGTTAATGGCTTGGGTGAGAACTGCTTAA

Title	Authors	Date	PMID	Source
Isolation and identification of phages and their application in the control of antibiotic resistant bacteria	Wang,Y.-Z., Xue,B.-N., Jin,M.-K., Hu,S.-L., Fortuna,K., Lavigine,R., Ye,M. and Su,J.-Q.	2024	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature