Protein

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Genbank accession
YP_009201400.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MSGTNIFTHASDAAQYVYLQPFTSPGSAFESGGDVQSIMELFDDSALAPLPSLPYATTTEVGIVEYATQAEANALDDLLTVITPASLDGVDQFVSPATSTQLGNLQELRNTDLTRTYSSSDASRLLSYRRLNEMMTTRNALADDTTNESQGFAEFANLSETLAYNPDRFISPLRTWNLIKAEIPNPWAQATETYTGVLRTVAERDGYKSDGSIAITVKGLNYVKATTSKRGAFKLTQNNYDRNASDSDEYAITPGTIDNLIATPTKHGFFELPSSYVNDSTKATSAALGVDLNTLLGPDGGTITGVLKCDNIYTNIISRQKQSSYGGTYYTTVQEQREMFPNNQLDAKIGLEGRPVGSIFHCTSSVDPNEIFGGVWYKMRAGRTMMGQGIGDDGFTRRYYAAGSFSDIDRVQLYESNLPQHQHAGWGEAYTGSREGCIRYETHRSPYGVTYTCDEYNTVSYWRFGITGSRNNPGSKSTDRDNYMYYNEAVGGNEPHENMMPYYPVYIWRRVK
Physico‐chemical
properties
protein length:512 AA
molecular weight: 56657,84360 Da
isoelectric point:4,92524
aromaticity:0,10938
hydropathy:-0,52344

Domains

View on InterPro
Domain architecture
YP_009201400.1
1 512 aa
ATT 355–511 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009201400.1
1 512 aa
Domain Start End Length (AA) Confidence
N-terminal 1 305 305 0,9700
Central domain 306 501 197 0,0569
C-terminal 502 512 10 0,9974
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Vibrio phage ValKK3 [NCBI] · taxon 1610855
Uroviricota Caudoviricetes Pantevenvirales Schizotequatrovirus Schizotequatrovirus valkk3
Host
Vibrio alginolyticus NBRC 15630 = ATCC 17749 [NCBI] · taxon 1219076
Bacteria Proteobacteria Gammaproteobacteria Vibrionales Vibrionaceae Vibrio

Coding sequence (CDS)

Genbank protein accession
YP_009201400.1 [NCBI]
Genbank nucleotide accession
NC_028829 [NCBI]
CDS location
range 168535 -> 170073
strand -
CDS
ATGTCAGGAACAAACATATTCACGCACGCTAGTGATGCAGCGCAATATGTTTACCTACAGCCCTTCACATCGCCTGGTTCAGCGTTTGAGTCAGGCGGTGATGTGCAGAGTATAATGGAGCTATTTGACGATAGCGCATTAGCACCACTTCCGTCACTTCCGTATGCGACAACGACTGAGGTTGGTATTGTTGAGTACGCAACTCAAGCAGAAGCTAATGCACTTGACGACTTATTAACTGTAATCACACCAGCGTCACTAGACGGGGTTGACCAGTTCGTGTCTCCAGCAACCAGTACTCAGTTAGGTAATCTACAAGAATTGCGTAATACTGATTTGACAAGAACATATTCGTCATCAGATGCAAGTCGTTTGCTGTCATATCGCCGTCTAAATGAAATGATGACGACTCGTAATGCACTAGCAGATGACACAACAAACGAATCACAAGGTTTTGCTGAGTTTGCAAATCTAAGCGAAACTTTAGCATATAACCCTGACCGATTCATTTCTCCACTTAGAACGTGGAACTTAATTAAAGCAGAGATACCAAACCCTTGGGCTCAAGCGACAGAAACATACACGGGTGTGCTTCGTACTGTAGCAGAACGAGACGGGTATAAATCAGACGGTTCGATTGCAATTACAGTTAAAGGTCTTAATTACGTTAAAGCGACGACATCTAAGCGTGGTGCATTCAAATTAACACAGAACAACTATGACCGCAATGCAAGCGATTCAGATGAATATGCTATAACTCCCGGTACAATCGACAATCTAATAGCGACACCGACTAAACACGGGTTCTTTGAACTACCAAGCTCGTATGTAAACGACTCAACAAAAGCAACAAGTGCTGCACTTGGCGTTGATTTGAATACACTATTAGGCCCAGACGGTGGGACAATTACGGGTGTTTTGAAATGTGACAACATTTACACAAACATCATTTCTCGTCAAAAGCAGAGCAGTTATGGCGGAACATATTACACAACTGTTCAAGAGCAGAGGGAAATGTTCCCGAACAATCAATTAGACGCGAAGATCGGTCTTGAAGGGCGCCCTGTTGGTAGTATTTTTCACTGTACTTCATCAGTTGACCCGAATGAGATTTTCGGTGGCGTATGGTATAAGATGAGAGCAGGTCGAACTATGATGGGGCAGGGTATCGGTGATGATGGGTTCACTCGCAGATATTATGCAGCGGGTTCGTTTAGTGACATCGACCGTGTTCAGTTATACGAGAGTAATTTACCACAACACCAACATGCAGGTTGGGGTGAAGCATATACAGGCTCACGCGAGGGGTGTATTCGCTACGAAACGCATCGAAGTCCGTATGGTGTAACGTATACTTGTGATGAATATAATACTGTCAGTTACTGGAGATTCGGTATAACAGGTTCGCGTAATAATCCCGGTTCGAAATCTACTGATCGTGATAATTACATGTATTACAACGAAGCAGTTGGTGGTAATGAGCCGCATGAGAATATGATGCCATACTACCCAGTTTACATTTGGAGACGAGTTAAATGA

Genome Context

Tertiary structure

YP_009201400.1
ESMFold structure
Source ESMFold
pLDDT 62.1
Oligomeric state monomer
Download structure