Protein

View in Explore
Genbank accession
YP_009847319.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSEVNMVSITVTQGLRERKVLRDRISRSINEGVFVSVVEGEAKRPASKAYRDLESLKATIQSSTDSVNGLINRYNAIVDALIASNASTTVTIAGVSMTVAAAIERRNSFEMSLNFLNAIQNQHNRCVTEVNTKQAVLDRAIESRILNNKTDSMDAAQVQQVSVDAKTVLDRESKPEVYDPMKNAENLKGLRSEAEAFMDELETQLNIVNATTMISVPA
Physico‐chemical
properties
protein length:218 AA
molecular weight: 23950,82330 Da
isoelectric point:5,39330
aromaticity:0,03211
hydropathy:-0,25367

Domains

Domains [InterPro]
DC_0027
STR
5–218
DC_0027
Coil
Unmapped
184–204
Coil
YP_009847319.1
1 218
Architecture
STR
STR 5-218
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage LAh_6
[NCBI] 		2591030 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009847319.1 [NCBI]
Genbank nucleotide accession
NC_048774.1 [NCBI]
CDS location
range 90743 -> 91399
strand -
CDS
ATGAGCGAAGTTAATATGGTTTCCATCACTGTTACCCAAGGTCTGCGTGAACGTAAAGTCCTCCGTGACCGTATCAGCCGCTCCATCAACGAAGGTGTCTTCGTGTCGGTGGTGGAAGGTGAGGCTAAACGCCCCGCCAGCAAGGCTTATCGTGACCTCGAATCCCTGAAGGCCACCATCCAATCCTCCACGGATTCGGTGAACGGCCTGATCAATCGTTACAATGCAATTGTGGATGCACTCATAGCATCCAACGCATCTACTACGGTGACGATTGCCGGCGTGTCCATGACCGTTGCAGCCGCCATTGAGCGTCGCAACAGTTTTGAAATGAGCCTCAACTTCCTGAATGCCATCCAGAACCAACATAACCGTTGTGTGACAGAGGTAAACACCAAGCAGGCTGTTCTGGATCGTGCTATCGAAAGCCGTATCCTTAACAACAAAACTGATTCCATGGATGCTGCACAAGTGCAACAAGTCTCCGTGGATGCAAAAACTGTGTTGGATCGTGAGTCCAAGCCGGAAGTGTACGATCCGATGAAGAACGCTGAGAACCTCAAAGGTCTCCGCAGCGAAGCAGAGGCTTTCATGGATGAGTTGGAAACCCAACTGAACATCGTGAACGCCACCACCATGATCTCCGTACCTGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c258c6c4ade2fb3cf2175c97a7ded13ad345d62e36ca425872ea41d0a7937dd0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8932
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages capable of disrupting biofilms from clinical strains of Aeromonas hydrophila with intrinsic antibiotic resistance Kabwe,M., Brown,T.L., Speirs,L., Ku,H., Leach,M., Chan,H.T., Petrovski,S., Lock,P. and Tucci,J. 2020-02-14 — GenBank