Protein

View in Explore
Genbank accession
XXJ62826.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,98
Seq2Symm
C3 confidence 0,938
C3 0,938
C1 0,668
C6 0,004
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSKGTQIFNHVIDDAGTVTVEVAGTAFDGLTGGNDDLQTCLELIQDHALSAIPDYPIASTTVAGLTKLSGNTEVVDPLNNDSAVTPSALDYWFENHATATEAQFGYVKLITTSTIDTVNPTDPVEAAQKHAFTLKTLNYALNNRFHASETKAGVVRLATNAQATTTGTLSTTVAMTPQRVKEMLDVWANTTASNASETTKGLIRLANGTEVNSVLVAENDLAISPYRFNFRTATTTRKAGFYLPDSTVANARTSNDHAVTVGTLSLFSANSSRVGVARLANNLTTNDPLRALSAAMGYKLNNEKIGAAGGTITGTLKINNIQSVGGTQLMSNGLIESTAMLNMYPVGSVYMSANSTSPATLFGGTWSRLAEGRVLVSEGTYAGRTFTNGETGGEYEVTLTEDTMPTHKHAGWGEHHDGDGLGFGIAYQYGRNNRGSGKSDRDNYLYYSSPVGGGHAHNNIQPYYTVYMWERTA
Physico‐chemical
properties
protein length:473 AA
molecular weight: 50392,20250 Da
isoelectric point:5,54450
aromaticity:0,07822
hydropathy:-0,27759

Domains

View on InterPro
Domain architecture
XXJ62826.1
1 473 aa
ATT 343–472 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Vibrio phage CZ01 [NCBI] · taxon 3435809
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host No host information

Coding sequence (CDS)

Genbank protein accession
XXJ62826.1 [NCBI]
Genbank nucleotide accession
PV740454.1 [NCBI]
CDS location
range 128804 -> 130225
strand +
CDS
ATGAGTAAAGGAACTCAAATTTTCAACCACGTGATTGACGACGCTGGAACAGTCACGGTAGAAGTTGCGGGCACAGCATTTGACGGGTTGACGGGTGGCAACGATGATCTTCAAACATGTCTTGAGCTTATTCAAGACCACGCACTTTCTGCAATCCCAGACTATCCGATTGCAAGTACAACAGTCGCTGGTCTTACTAAACTAAGCGGAAATACTGAAGTAGTAGACCCACTCAACAATGACAGTGCAGTAACACCTAGCGCACTTGATTACTGGTTTGAGAATCACGCTACTGCTACCGAAGCGCAGTTCGGATATGTCAAGTTGATCACAACGTCAACAATTGACACAGTAAACCCGACAGATCCAGTAGAGGCAGCTCAGAAGCACGCATTCACACTGAAGACGTTGAACTATGCGTTAAACAATAGATTTCACGCATCTGAGACGAAAGCCGGTGTTGTGCGTCTAGCAACGAATGCACAAGCAACAACGACGGGTACACTGTCAACTACAGTAGCAATGACTCCTCAACGAGTCAAAGAAATGCTAGATGTATGGGCGAACACAACTGCGTCAAATGCATCTGAAACGACAAAAGGTCTGATACGTTTAGCGAATGGTACAGAAGTGAACAGCGTTCTTGTGGCTGAAAACGATTTGGCGATATCACCATATCGTTTCAATTTCAGAACAGCAACTACGACTAGAAAAGCAGGGTTTTATTTGCCTGATTCTACAGTAGCAAACGCTAGAACGTCTAATGATCATGCTGTTACTGTTGGTACACTTTCATTATTCAGTGCGAATAGTTCACGTGTCGGTGTTGCTAGACTAGCGAACAATCTTACAACTAATGATCCACTAAGAGCACTAAGTGCAGCAATGGGTTATAAGTTGAATAATGAAAAAATCGGCGCTGCTGGTGGTACTATTACAGGAACGCTGAAGATTAACAACATTCAGTCTGTTGGTGGCACTCAGTTGATGAGCAACGGTTTGATCGAATCAACTGCAATGCTTAACATGTACCCTGTTGGATCAGTCTACATGTCAGCAAATTCAACATCACCTGCTACATTATTTGGCGGTACGTGGTCTAGATTAGCTGAAGGTCGAGTTCTAGTTTCTGAAGGTACATATGCTGGAAGAACGTTCACTAACGGTGAGACTGGTGGCGAATATGAAGTTACTCTGACTGAAGATACAATGCCAACACACAAACATGCTGGTTGGGGTGAACATCACGACGGTGATGGTCTTGGATTCGGTATTGCATATCAATACGGTCGAAACAATAGAGGTTCTGGTAAGTCTGACAGAGACAACTATTTGTACTACTCATCTCCAGTGGGTGGTGGACATGCACACAACAACATTCAGCCATACTACACTGTTTACATGTGGGAAAGAACTGCATAA

Genome Context

Tertiary structure

XXJ62826.1
ESMFold2 structure
Source ESMFold2
pLDDT 63.5
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio natriegens Bacteriophage CZ01 Zhu,L. and Zhu,D. 2015-12 — GenBank