Protein

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Genbank accession
XXJ62826.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MSKGTQIFNHVIDDAGTVTVEVAGTAFDGLTGGNDDLQTCLELIQDHALSAIPDYPIASTTVAGLTKLSGNTEVVDPLNNDSAVTPSALDYWFENHATATEAQFGYVKLITTSTIDTVNPTDPVEAAQKHAFTLKTLNYALNNRFHASETKAGVVRLATNAQATTTGTLSTTVAMTPQRVKEMLDVWANTTASNASETTKGLIRLANGTEVNSVLVAENDLAISPYRFNFRTATTTRKAGFYLPDSTVANARTSNDHAVTVGTLSLFSANSSRVGVARLANNLTTNDPLRALSAAMGYKLNNEKIGAAGGTITGTLKINNIQSVGGTQLMSNGLIESTAMLNMYPVGSVYMSANSTSPATLFGGTWSRLAEGRVLVSEGTYAGRTFTNGETGGEYEVTLTEDTMPTHKHAGWGEHHDGDGLGFGIAYQYGRNNRGSGKSDRDNYLYYSSPVGGGHAHNNIQPYYTVYMWERTA
Physico‐chemical
properties
protein length:473 AA
molecular weight: 50392,20250 Da
isoelectric point:5,54450
aromaticity:0,07822
hydropathy:-0,27759

Domains

Domains [InterPro]
SSF88874
337–471
SSF88874
IPR053827
343–472
IPR053827
XXJ62826.1
1 473
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage CZ01
[NCBI] 		3435809 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXJ62826.1 [NCBI]
Genbank nucleotide accession
PV740454.1 [NCBI]
CDS location
range 128804 -> 130225
strand +
CDS
ATGAGTAAAGGAACTCAAATTTTCAACCACGTGATTGACGACGCTGGAACAGTCACGGTAGAAGTTGCGGGCACAGCATTTGACGGGTTGACGGGTGGCAACGATGATCTTCAAACATGTCTTGAGCTTATTCAAGACCACGCACTTTCTGCAATCCCAGACTATCCGATTGCAAGTACAACAGTCGCTGGTCTTACTAAACTAAGCGGAAATACTGAAGTAGTAGACCCACTCAACAATGACAGTGCAGTAACACCTAGCGCACTTGATTACTGGTTTGAGAATCACGCTACTGCTACCGAAGCGCAGTTCGGATATGTCAAGTTGATCACAACGTCAACAATTGACACAGTAAACCCGACAGATCCAGTAGAGGCAGCTCAGAAGCACGCATTCACACTGAAGACGTTGAACTATGCGTTAAACAATAGATTTCACGCATCTGAGACGAAAGCCGGTGTTGTGCGTCTAGCAACGAATGCACAAGCAACAACGACGGGTACACTGTCAACTACAGTAGCAATGACTCCTCAACGAGTCAAAGAAATGCTAGATGTATGGGCGAACACAACTGCGTCAAATGCATCTGAAACGACAAAAGGTCTGATACGTTTAGCGAATGGTACAGAAGTGAACAGCGTTCTTGTGGCTGAAAACGATTTGGCGATATCACCATATCGTTTCAATTTCAGAACAGCAACTACGACTAGAAAAGCAGGGTTTTATTTGCCTGATTCTACAGTAGCAAACGCTAGAACGTCTAATGATCATGCTGTTACTGTTGGTACACTTTCATTATTCAGTGCGAATAGTTCACGTGTCGGTGTTGCTAGACTAGCGAACAATCTTACAACTAATGATCCACTAAGAGCACTAAGTGCAGCAATGGGTTATAAGTTGAATAATGAAAAAATCGGCGCTGCTGGTGGTACTATTACAGGAACGCTGAAGATTAACAACATTCAGTCTGTTGGTGGCACTCAGTTGATGAGCAACGGTTTGATCGAATCAACTGCAATGCTTAACATGTACCCTGTTGGATCAGTCTACATGTCAGCAAATTCAACATCACCTGCTACATTATTTGGCGGTACGTGGTCTAGATTAGCTGAAGGTCGAGTTCTAGTTTCTGAAGGTACATATGCTGGAAGAACGTTCACTAACGGTGAGACTGGTGGCGAATATGAAGTTACTCTGACTGAAGATACAATGCCAACACACAAACATGCTGGTTGGGGTGAACATCACGACGGTGATGGTCTTGGATTCGGTATTGCATATCAATACGGTCGAAACAATAGAGGTTCTGGTAAGTCTGACAGAGACAACTATTTGTACTACTCATCTCCAGTGGGTGGTGGACATGCACACAACAACATTCAGCCATACTACACTGTTTACATGTGGGAAAGAACTGCATAA

Tertiary structure

PDB ID
5f2066611e6fa30054dc1181b28338a6d3b62302800a4681c0588299de6eb6c8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6185
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio natriegens Bacteriophage CZ01 Zhu,L. and Zhu,D. 2015-12 — GenBank