Phage RBP Database

Genbank accession

UZV40566.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,89

TF

Evidence RBPdetect2

Probability 0,92

Seq2Symm

C1 confidence 0,821

C1	0,821
C3	0,655
C2	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAEIKTGILLRRNLKKHFVNDAKPTQGEIVLATDTNEIGMLVNDEIQWTPIQGVVNTVAGKQGDVILNKKDVGLENVDNTADIDKPISNSTKLEFQRHYTAENPHNITKKTLGLENVDNTADIDKPVSNLTQIELNKKISWDDARKQAGGKDPVFTDTTYTIKDGELSEFNFNSYYKNFIDTFNTNSRVLPSTQALIANGRTITLRRADGSSESIETQDTLYDDSELRALIEQAKIDLHINIQDNLESDSTQDALSANQGKVLKGLIDEIKKVINITDDDFRNLQDIINYIEENREKFDDLTIANIKGLQAALDSKLNRDDSTYIAPNSALLESHPASDFVLNTNYNAKLIEIQDSLNSINSQIKLFETQAGVDSKINQAIRDLNFTEIIQSINEQITRLQGSLDDIDLDAITENLQKVQQDLTQRISQLETNTSKKLEEFEAIVNNFDMSEIQTSINNFKDQINQNIDSIQGVVDSVSESLSNIENNIQTSLENKVSKDELATEVQTINDNIADLSNIANEAKWQDNFYGKVDRRRQALWSIISISKDSFKGSYKKPNTYNYWEAKYKNLKYINDNFDSLETISGAPTYDVVTDQVIRLTFNDISQASFLIGSPKNKIQIAKIIAVNANTKKAVFIYGYPSFMTDDLSKIMVTIEKDSSFGNYLSRANKTDPETFQKIVTAQEFDLPDDTDDYSYFEASYEISGNTITLTIPENIFLEFYGNMTSVETTVTGASAAQVWSATLKSTDYEGKKLFSNGVLIGKDLTGAILTIYDDKSTYINDFDEARTNYNDFQIIREEYEDIMYTRDFLPGTIGPGEDDLEW

Physico‐chemical properties

protein length:	823 AA
molecular weight:	92764,71120 Da
isoelectric point:	4,48615
aromaticity:	0,08141
hydropathy:	-0,53159

Domain architecture

UZV40566.1

1 823 aa

STR 242–269 · STR 349–522 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR054500
STR

IPR054500 G3DSA:1.20.120.20

Coil
Unmapped

Coil Coil

UZV40566.1

1823 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0351
STR

DC_0351 DC_1597

UZV40566.1

1823 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR054500	STR	DC_0514	242	269	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits
G3DSA:1.20.120.20	STR	G3DSA:1.20.120.20	349	522	Merged direct domain	G3DSA:1.20.120.20	Central	Low	Positional only	14 proteins / 14 hits
Coil	Unmapped	-	413	433	Coils	Coil	-	-	-	-
Coil	Unmapped	-	499	519	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Campylobacter phage vB_CjeM_WX1 [NCBI] · taxon 2995678

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Campylobacter jejuni [NCBI] · taxon 197

cellular organisms Bacteria Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales

Genbank protein accession

UZV40566.1 [NCBI]

Genbank nucleotide accession

OP654737.1 [NCBI]

CDS location

range 123052 -> 125523
strand +

CDS

ATGGCTGAAATAAAAACTGGTATTTTATTAAGACGTAATCTTAAAAAACATTTTGTAAATGATGCAAAACCAACACAAGGTGAAATCGTTCTTGCTACTGATACAAATGAAATTGGTATGCTTGTAAACGATGAAATACAATGGACTCCTATTCAAGGCGTCGTTAACACAGTTGCTGGTAAACAAGGTGACGTCATACTAAACAAAAAAGATGTAGGCCTTGAAAATGTTGATAACACTGCTGACATTGATAAGCCAATTTCTAACTCTACAAAATTAGAATTTCAAAGGCATTATACAGCCGAAAACCCACACAATATAACAAAGAAAACACTTGGTTTAGAAAACGTTGATAACACTGCTGATATAGATAAACCTGTATCTAACTTAACTCAAATTGAGTTAAATAAGAAAATTTCTTGGGATGATGCTAGAAAGCAAGCCGGTGGGAAAGACCCAGTTTTTACAGATACTACTTATACCATTAAAGATGGTGAACTTTCAGAATTTAACTTTAATTCGTATTATAAGAATTTCATAGATACTTTTAATACTAACTCTAGGGTCTTACCAAGTACACAAGCTCTTATAGCTAATGGTAGGACAATAACCTTAAGAAGAGCTGACGGCTCGAGTGAAAGTATAGAAACACAAGATACTTTATATGATGATTCTGAACTTAGAGCATTAATAGAACAAGCTAAAATAGATTTACATATAAACATACAAGATAATTTAGAATCAGATTCTACTCAAGATGCTTTGAGTGCTAATCAAGGCAAAGTTCTTAAAGGTTTAATAGACGAAATAAAGAAGGTAATTAATATCACAGATGATGATTTTAGAAATCTTCAAGATATTATTAATTATATAGAAGAAAACCGCGAAAAATTTGATGATTTAACAATTGCTAACATCAAAGGCTTACAAGCTGCTTTAGATTCTAAATTAAATAGAGATGATTCTACATATATTGCTCCAAATTCTGCATTATTAGAATCTCACCCAGCTAGTGATTTTGTATTAAATACAAATTATAATGCTAAGTTAATAGAAATACAAGATTCTTTAAATTCTATCAATTCACAAATTAAATTGTTTGAAACTCAAGCGGGTGTGGATTCTAAAATAAACCAAGCAATCAGAGATTTAAATTTCACTGAAATCATACAGAGTATCAATGAACAAATCACGAGACTACAAGGCTCTTTAGACGATATTGATTTGGATGCTATAACAGAAAATCTCCAAAAAGTTCAACAAGATCTAACTCAACGAATATCACAATTAGAAACTAACACATCTAAAAAATTAGAAGAATTTGAAGCTATTGTTAATAATTTTGATATGTCTGAAATACAAACCAGTATTAATAATTTTAAAGACCAAATCAATCAAAATATTGATAGTATACAAGGTGTTGTAGATTCTGTTTCTGAATCATTATCAAATATTGAAAATAATATCCAAACCAGTTTAGAAAATAAAGTTTCAAAAGATGAATTAGCTACTGAGGTTCAAACTATTAATGATAATATTGCTGATTTATCAAACATAGCAAATGAAGCAAAATGGCAAGATAATTTTTATGGTAAAGTTGATAGAAGACGCCAAGCTTTATGGTCAATTATATCAATTTCAAAAGACTCTTTCAAAGGTTCGTATAAAAAACCAAATACCTATAATTACTGGGAAGCAAAATATAAAAATCTTAAGTATATCAATGATAATTTTGATAGTTTAGAAACGATATCTGGTGCACCTACATATGACGTGGTTACTGATCAGGTTATTAGATTAACTTTTAATGATATTTCACAAGCATCATTTTTAATTGGAAGTCCTAAGAATAAAATTCAAATAGCTAAAATTATAGCAGTAAATGCTAATACTAAAAAAGCTGTGTTCATATACGGGTATCCTAGTTTTATGACAGACGATTTATCAAAAATTATGGTAACCATAGAAAAAGATTCAAGTTTTGGTAATTATCTATCAAGAGCTAATAAAACAGATCCAGAAACTTTTCAAAAAATTGTAACTGCACAAGAATTTGATTTGCCGGATGATACTGATGATTATTCATATTTTGAAGCTAGTTATGAAATATCTGGAAATACAATAACACTAACTATACCAGAAAACATATTTTTAGAATTCTATGGTAATATGACATCAGTAGAAACAACCGTTACGGGTGCTAGTGCTGCACAAGTTTGGTCAGCGACTTTAAAATCCACTGATTATGAAGGTAAGAAATTATTCTCAAACGGGGTGTTGATAGGAAAAGATTTGACTGGCGCAATCTTAACTATATATGATGATAAATCAACATACATAAATGACTTCGATGAAGCTAGAACTAATTATAATGATTTTCAAATAATACGGGAAGAATATGAGGATATTATGTATACAAGAGATTTTTTACCAGGAACTATAGGACCAGGCGAAGACGACCTAGAATGGTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)