Protein

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Genbank accession
YP_009877766.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,98
Protein sequence
MPNGTVNDAIKYVTPEMFRLDTDTNDDQMFQRMWDFAIPANANIIGDGEYHLANTYEVPEVHTPPVRYDFNVMTIKLRKVVYTAATGVAFVNRSPGCVFEIGELAGKIFEIAEEAGTLDSVVIDETIGFQLMGQGRIPNVIHVVHGFATNVKLDTCFTRAIYVGECYDSLRGVRCVVANANRIFGKIGGGFSNAEIDPSTCEVGITFDTSSNTNEVYANIEYCRRTVNSRPFVDDGSTNVFFGYIESCNSPGLVNGPYARYQIKNGGNNTRSQFGYEVGGMQSQIEMLDDVVDNGVPVTVGNSTITYKNLQSALSKSNQAEVIGKGSREIIAQGKVNQYIVSSNDLLAPQWNLAVGGAAQTSDLSITSGLLNGGASTQYRYGSRIVANREATESDYYVISQNVTAAFLREVSFGIALRMVEEVGYPGDAEFLLKIQAITGDILYSKAFRLTGGSKIVEHFHSVPTQFVDSDTYSVQLHIRTWKMSKIDIFNIHLCNGANIERAPASVGTGPTPFQPIDKNAIGFLPKRICKPISAPLTLKQYEFDTYIVEGTGNITLHAGYDGQTVTFIRNGATDFNLLSTETIDGAGLTPMTDGMKITIQFIEQLGRWVTLSKVS
Physico‐chemical
properties
protein length:616 AA
molecular weight: 67348,15800 Da
isoelectric point:5,12787
aromaticity:0,09578
hydropathy:-0,11282

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009877766.1
1 616 aa
Domain Start End Length (AA) Confidence
N-terminal 1 26 26 0,9502
Central domain 27 330 305 0,9722
C-terminal 331 616 285 0,9321
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage SP1 [NCBI] · taxon 2025818
Uroviricota Caudoviricetes Pantevenvirales Cvivirinae Kuttervirus
Host
Salmonella pullorum [NCBI] · taxon 605
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_009877766.1 [NCBI]
Genbank nucleotide accession
NC_049396 [NCBI]
CDS location
range 113052 -> 114902
strand -
CDS
TTGCCTAACGGCACTGTCAACGACGCCATTAAATATGTCACTCCTGAAATGTTCCGACTGGATACGGATACCAATGATGACCAAATGTTTCAGCGCATGTGGGATTTTGCAATTCCTGCCAACGCCAACATAATTGGTGATGGTGAGTATCACTTAGCCAATACCTATGAAGTTCCGGAAGTGCATACACCTCCTGTGCGTTATGACTTCAATGTGATGACCATCAAATTGCGCAAGGTGGTATACACAGCAGCAACAGGAGTTGCATTTGTCAACAGGTCTCCTGGATGTGTGTTTGAAATTGGTGAGCTAGCTGGCAAGATATTTGAGATCGCAGAAGAGGCTGGCACACTGGATTCTGTAGTTATCGATGAAACAATTGGATTTCAGTTAATGGGGCAAGGAAGAATCCCTAACGTTATTCACGTAGTACATGGATTTGCAACCAATGTGAAACTGGATACTTGTTTCACCAGAGCCATCTATGTGGGCGAATGTTATGATTCATTGCGTGGCGTAAGATGCGTAGTGGCTAACGCTAACCGTATCTTCGGTAAGATTGGTGGTGGCTTTAGTAATGCCGAGATTGACCCGTCTACCTGCGAAGTTGGTATTACTTTTGATACCAGTTCTAACACTAATGAAGTGTATGCCAATATTGAGTATTGTCGTCGTACAGTAAACTCACGTCCATTTGTAGATGATGGTTCTACTAACGTATTCTTCGGTTATATCGAGTCCTGTAACTCACCTGGCCTGGTGAATGGCCCTTATGCCCGTTACCAGATTAAGAACGGGGGTAATAATACTCGCTCACAGTTTGGATATGAAGTTGGTGGTATGCAGTCTCAGATTGAGATGTTGGATGATGTAGTTGATAACGGTGTTCCTGTTACTGTAGGTAACTCCACCATTACCTATAAGAACTTGCAATCTGCTCTGTCTAAGTCGAATCAGGCTGAAGTAATTGGTAAAGGTAGTCGTGAGATTATTGCTCAGGGGAAGGTGAATCAGTATATCGTAAGTTCCAATGACTTACTGGCACCACAATGGAACTTGGCTGTTGGTGGAGCTGCGCAGACTAGTGACCTGTCTATTACTTCCGGTTTGCTGAATGGCGGTGCTTCTACACAGTATCGTTATGGGTCTCGTATTGTTGCTAATCGAGAAGCCACCGAATCTGATTATTACGTGATTAGTCAAAACGTTACTGCAGCCTTCCTGCGTGAAGTGTCTTTCGGGATTGCATTGCGTATGGTTGAGGAAGTCGGTTATCCTGGAGATGCAGAATTTTTGCTGAAGATTCAGGCTATTACTGGTGATATCCTTTACAGTAAAGCGTTCCGTTTAACTGGTGGTAGTAAGATTGTTGAGCATTTCCACAGTGTTCCTACTCAATTTGTTGACAGTGATACTTATAGTGTTCAGCTCCATATTCGTACATGGAAGATGTCAAAAATTGATATCTTTAATATTCATCTATGTAATGGGGCTAACATTGAACGTGCTCCTGCTAGTGTTGGTACTGGACCCACCCCATTCCAACCAATAGACAAGAATGCCATAGGGTTCCTGCCTAAGCGGATATGTAAACCAATTTCTGCGCCGTTAACTTTGAAACAATATGAATTTGACACATATATTGTTGAGGGTACTGGTAATATTACCTTACACGCTGGGTATGATGGGCAGACTGTTACCTTCATTCGTAATGGTGCCACTGATTTCAATTTATTATCTACAGAAACAATCGATGGTGCAGGTTTGACTCCAATGACTGATGGTATGAAAATTACAATTCAGTTCATTGAGCAATTAGGAAGGTGGGTTACTTTATCAAAGGTATCATAA

Genome Context

Tertiary structure

YP_009877766.1
ESMFold structure
Source ESMFold
pLDDT 62.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Lytic Bacteriophage SP1 Infecting Salmonella Pullorum Isolates Kim,D., Kim,Y.J., Han,B.K. and Kim,H. 2012-09-15 — GenBank