Protein

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Genbank accession
YP_009877766.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MPNGTVNDAIKYVTPEMFRLDTDTNDDQMFQRMWDFAIPANANIIGDGEYHLANTYEVPEVHTPPVRYDFNVMTIKLRKVVYTAATGVAFVNRSPGCVFEIGELAGKIFEIAEEAGTLDSVVIDETIGFQLMGQGRIPNVIHVVHGFATNVKLDTCFTRAIYVGECYDSLRGVRCVVANANRIFGKIGGGFSNAEIDPSTCEVGITFDTSSNTNEVYANIEYCRRTVNSRPFVDDGSTNVFFGYIESCNSPGLVNGPYARYQIKNGGNNTRSQFGYEVGGMQSQIEMLDDVVDNGVPVTVGNSTITYKNLQSALSKSNQAEVIGKGSREIIAQGKVNQYIVSSNDLLAPQWNLAVGGAAQTSDLSITSGLLNGGASTQYRYGSRIVANREATESDYYVISQNVTAAFLREVSFGIALRMVEEVGYPGDAEFLLKIQAITGDILYSKAFRLTGGSKIVEHFHSVPTQFVDSDTYSVQLHIRTWKMSKIDIFNIHLCNGANIERAPASVGTGPTPFQPIDKNAIGFLPKRICKPISAPLTLKQYEFDTYIVEGTGNITLHAGYDGQTVTFIRNGATDFNLLSTETIDGAGLTPMTDGMKITIQFIEQLGRWVTLSKVS
Physico‐chemical
properties
protein length:616 AA
molecular weight: 67348,15800 Da
isoelectric point:5,12787
aromaticity:0,09578
hydropathy:-0,11282

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009877766.1
1 616
Domain Start End Length (AA) Confidence
N-terminal 1 26 26 0,9502
Central domain 27 330 305 0,9722
C-terminal 331 616 285 0,9321
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-26
Central
27-330
C-terminal
331-616

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SP1
[NCBI] 		2025818 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella pullorum
[NCBI] 		605 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009877766.1 [NCBI]
Genbank nucleotide accession
NC_049396 [NCBI]
CDS location
range 113052 -> 114902
strand -
CDS
TTGCCTAACGGCACTGTCAACGACGCCATTAAATATGTCACTCCTGAAATGTTCCGACTGGATACGGATACCAATGATGACCAAATGTTTCAGCGCATGTGGGATTTTGCAATTCCTGCCAACGCCAACATAATTGGTGATGGTGAGTATCACTTAGCCAATACCTATGAAGTTCCGGAAGTGCATACACCTCCTGTGCGTTATGACTTCAATGTGATGACCATCAAATTGCGCAAGGTGGTATACACAGCAGCAACAGGAGTTGCATTTGTCAACAGGTCTCCTGGATGTGTGTTTGAAATTGGTGAGCTAGCTGGCAAGATATTTGAGATCGCAGAAGAGGCTGGCACACTGGATTCTGTAGTTATCGATGAAACAATTGGATTTCAGTTAATGGGGCAAGGAAGAATCCCTAACGTTATTCACGTAGTACATGGATTTGCAACCAATGTGAAACTGGATACTTGTTTCACCAGAGCCATCTATGTGGGCGAATGTTATGATTCATTGCGTGGCGTAAGATGCGTAGTGGCTAACGCTAACCGTATCTTCGGTAAGATTGGTGGTGGCTTTAGTAATGCCGAGATTGACCCGTCTACCTGCGAAGTTGGTATTACTTTTGATACCAGTTCTAACACTAATGAAGTGTATGCCAATATTGAGTATTGTCGTCGTACAGTAAACTCACGTCCATTTGTAGATGATGGTTCTACTAACGTATTCTTCGGTTATATCGAGTCCTGTAACTCACCTGGCCTGGTGAATGGCCCTTATGCCCGTTACCAGATTAAGAACGGGGGTAATAATACTCGCTCACAGTTTGGATATGAAGTTGGTGGTATGCAGTCTCAGATTGAGATGTTGGATGATGTAGTTGATAACGGTGTTCCTGTTACTGTAGGTAACTCCACCATTACCTATAAGAACTTGCAATCTGCTCTGTCTAAGTCGAATCAGGCTGAAGTAATTGGTAAAGGTAGTCGTGAGATTATTGCTCAGGGGAAGGTGAATCAGTATATCGTAAGTTCCAATGACTTACTGGCACCACAATGGAACTTGGCTGTTGGTGGAGCTGCGCAGACTAGTGACCTGTCTATTACTTCCGGTTTGCTGAATGGCGGTGCTTCTACACAGTATCGTTATGGGTCTCGTATTGTTGCTAATCGAGAAGCCACCGAATCTGATTATTACGTGATTAGTCAAAACGTTACTGCAGCCTTCCTGCGTGAAGTGTCTTTCGGGATTGCATTGCGTATGGTTGAGGAAGTCGGTTATCCTGGAGATGCAGAATTTTTGCTGAAGATTCAGGCTATTACTGGTGATATCCTTTACAGTAAAGCGTTCCGTTTAACTGGTGGTAGTAAGATTGTTGAGCATTTCCACAGTGTTCCTACTCAATTTGTTGACAGTGATACTTATAGTGTTCAGCTCCATATTCGTACATGGAAGATGTCAAAAATTGATATCTTTAATATTCATCTATGTAATGGGGCTAACATTGAACGTGCTCCTGCTAGTGTTGGTACTGGACCCACCCCATTCCAACCAATAGACAAGAATGCCATAGGGTTCCTGCCTAAGCGGATATGTAAACCAATTTCTGCGCCGTTAACTTTGAAACAATATGAATTTGACACATATATTGTTGAGGGTACTGGTAATATTACCTTACACGCTGGGTATGATGGGCAGACTGTTACCTTCATTCGTAATGGTGCCACTGATTTCAATTTATTATCTACAGAAACAATCGATGGTGCAGGTTTGACTCCAATGACTGATGGTATGAAAATTACAATTCAGTTCATTGAGCAATTAGGAAGGTGGGTTACTTTATCAAAGGTATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7090b17e4013be8dc4119d0778377f0fd036fd981f4cc760ae1def480f937a1d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6280
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Lytic Bacteriophage SP1 Infecting Salmonella Pullorum Isolates Kim,D., Kim,Y.J., Han,B.K. and Kim,H. 2012-09-15 — GenBank