Protein

View in Explore
Genbank accession
UXR08343.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MYINNGRINYNNEYGYRRGIYREPFYSDNADYNTNSKSYYDYLARFNGFIFELCDFVNGLADDIQKMKETYDALTLSNTDVTYTVGQKGDFDTLNHCFDYIENLIVQPKSIRVILLKDYMMREQLFLRDKRYNHITITSENDIVEAYETELNRQIEIKTNPIFRVKPLFYGINSTFPKIDFKLQNKDFSDTINCGFLMDNTTFEMTERGGSTHFNFIGLCGVNGSHIQTNYCDFSYNGNREQLEEYNKDQDMYGDGLRIFNSSLTGNYMTVNRCGEIGIHFSHGASGYIDFTEARFNGHHGLMVTTGSQASARNCKITDTIDDNVVSYASSDIDLRYSDCSNSQTTYGCIATRSSNINFDKGIANGCGASGIMANRGCSIDATGATASRNKWHGVIASNNSKVDFTSGNANENGLDGIQCTHGSTVQARLSTTNGNKRNGVLAYAGDVYCQLINCDGNGRRGLEATRGGYVAAYGAKVSRSKDDNVLAYGSVISVNEAVIERAGRNGIEATRGGQIFADRITITGSGDFGILAYASKVFAEASNISGTKNEPVYATRGGEITCFGSNISSNKTVYNVYNGSRIFTDKDHGYSTNVDPQTLSSKGLIILG
Physico‐chemical
properties
protein length:609 AA
molecular weight: 67366,72700 Da
isoelectric point:5,65198
aromaticity:0,10837
hydropathy:-0,46322

Domains

View on InterPro
Domain architecture
UXR08343.1
1 609 aa
STR 220–455 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
UXR08343.1
1 609 aa
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,2450
Central domain 11 588 579 0,9197
C-terminal 589 609 20 0,4896
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Staphylococcus phage vB_ScaM-V1SC05 [NCBI] · taxon 2983350
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Staphylococcus capitis [NCBI] · taxon 29388
cellular organisms Bacteria Bacillati Bacillota Bacilli Bacillales

Coding sequence (CDS)

Genbank protein accession
UXR08343.1 [NCBI]
Genbank nucleotide accession
OP297179.1 [NCBI]
CDS location
range 3725 -> 5554
strand +
CDS
ATGTATATAAATAACGGTCGAATCAATTATAATAATGAATACGGGTATCGTCGTGGGATATATCGTGAACCATTTTACAGTGATAATGCAGATTATAATACCAATTCAAAATCATATTATGATTATTTAGCGCGATTTAATGGTTTTATTTTTGAATTATGTGATTTTGTAAATGGACTAGCAGATGATATACAAAAAATGAAAGAAACATACGACGCATTAACATTATCAAATACAGATGTGACTTATACAGTAGGACAAAAAGGCGATTTTGACACATTGAATCATTGTTTTGATTACATTGAAAATTTAATTGTTCAACCTAAATCAATACGTGTCATTTTACTTAAAGATTACATGATGCGTGAACAATTATTCTTACGTGATAAACGTTATAATCATATTACGATTACATCAGAAAATGATATTGTTGAAGCCTATGAAACAGAATTAAACAGACAAATAGAAATTAAAACAAATCCTATTTTTAGAGTAAAACCACTATTTTATGGAATAAATTCAACATTCCCTAAAATTGATTTTAAACTACAAAATAAAGACTTTTCAGATACCATTAATTGTGGTTTCTTAATGGATAATACAACGTTTGAAATGACTGAACGTGGTGGTTCAACACACTTTAATTTTATTGGGTTATGTGGTGTTAATGGTTCACATATTCAAACCAACTATTGTGATTTTTCATACAATGGTAATCGTGAACAATTAGAAGAGTATAATAAAGACCAAGATATGTATGGTGACGGTTTAAGAATATTTAACTCATCATTAACAGGTAACTATATGACAGTTAATCGTTGTGGTGAAATTGGTATACATTTCTCACATGGTGCAAGTGGTTATATTGATTTTACCGAAGCAAGATTTAACGGACACCATGGTTTAATGGTGACAACAGGTTCACAAGCCAGTGCAAGAAACTGTAAAATTACAGATACCATTGATGATAATGTTGTAAGTTATGCGTCAAGTGATATTGATTTAAGATATTCAGATTGTTCGAATTCACAAACAACGTATGGGTGTATTGCTACACGTTCATCAAACATTAACTTTGATAAAGGGATTGCTAATGGTTGTGGTGCAAGTGGTATTATGGCAAACAGGGGTTGTTCTATTGACGCCACAGGTGCAACGGCTTCACGTAATAAATGGCATGGTGTCATTGCAAGTAATAACTCAAAAGTGGATTTCACAAGTGGTAATGCGAATGAAAACGGACTCGACGGAATCCAATGTACACATGGTTCAACTGTTCAAGCAAGATTATCAACAACCAATGGTAATAAAAGAAATGGTGTACTTGCCTATGCAGGTGATGTTTATTGCCAATTGATTAATTGTGATGGAAATGGTCGTCGTGGATTAGAAGCTACACGTGGTGGTTATGTCGCAGCGTACGGGGCAAAGGTTTCACGTTCAAAAGATGATAACGTACTTGCTTATGGTTCAGTCATTTCTGTCAATGAAGCAGTGATTGAACGTGCAGGTCGTAATGGTATTGAAGCCACACGTGGTGGTCAAATATTTGCAGATAGAATCACAATCACAGGTAGTGGTGATTTTGGTATTTTAGCTTATGCGTCTAAAGTGTTCGCCGAAGCGTCAAATATTTCAGGTACTAAAAACGAACCCGTTTATGCGACACGTGGTGGGGAAATAACATGCTTTGGTTCAAATATTTCAAGTAACAAAACAGTTTATAACGTGTATAATGGTAGTAGGATATTTACAGATAAAGACCATGGATATTCTACCAATGTTGACCCTCAAACATTATCAAGTAAAGGGTTGATTATTCTAGGGTAG

Genome Context

Tertiary structure

UXR08343.1
ESMFold structure
Source ESMFold
pLDDT 87.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
An innovative bacteriophage-based decontamination to control environmental colonization of intensive care units with Staphylococcus capitis: an in vitro proof-of-concept Chavignon,M. and Kolenda,C. 2022-11-16 — GenBank