Protein

View in Explore
Genbank accession
YP_010668714.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSYEDDLGLDDWDDPFAGDFDLDGDFDIDPFKGKGFVSSMASGFLGGLVNETVGSGAAITRSLRTILPNTFSNAFDRTNRAIERYDELKTELKEQNYESVRSLQSIAGQLSNRFGEKLPGGLRNKMDDFSQKDFSDWEKSDGSYNSMEGIEEESDYDLTLVLDSVMSRQEGLFSEMTNSLNVMSANVGGQISSAVMAGNRQLVNIETSVRDLNDYQRNVQFKIEQTKLNLMAKGYVANVKYYKFMEKGMHAQVAELKKILKGTMMSDYQKTSNFTASKQYMRDSLFSTVGRRVGGLTGLIRDRFGKEARQDASDSASSVLGMVADMLEMSDGMPVSAGMLGDMAGRGLAGAAVRNLPNFFARGPGKRMLESLAKKNPAEAKALRRQWGRLSNTGSKASYMSNAGVGLINFMAEDYQAMDEMPFIDYEDYVASLPPDKQPMSKARWTIQNAASNRAKAAMNSFMSEMNQAKGTQYTLKKRNPRDLVDAGIWTQGNNVTLNEVIPGLISRTNQLLEMIRTGDSNAELVTYNYMRGQFQNETNKQIAVQADLMPAAEFDRYATAALEFVDDLDPKKTLSQGARKAFAKVIARDVDREKNFNPFYYIGDIPGISGPMLDEIHAVVRRHFGLRDQDIARFNETTGFERMQVMTEMRNSRYQERLNKAGSAATNLKDLAPNIAERIDMLRATGNEQLLRDLGVIYTENGIDKVDMEVFHERIGMFMDDPNNPALRGMNPSDKTQGKKTRNSFHIPDRPAPTNDGKRTEGASFAGLSSSLNTLTEKLDVLASSNMSSKSGKPDTAYMDTQTGEIVSNTSKIAESNQRMETILSSLLDLANKGKLFSGAPKNANEERQEEQAKEGLMSKIKGLFPEGMFGRGMDLLVKNSPIVLGGVLGGIASNFASNPIAAASMAVGGLALGGLVQYWGNKDRKEKVSANEPSDDEDIVDENGESILKSAKLKAGEYIDAITKRVINTYREIKGPVIDVVSKAIITVRELGGRIFGPDGRAVVLRGIETAKGMIVNAYNFVNPIGKLRAGIDMGKEIIYQQDVFVKGDLQNPRLRAVGFKNVEYWKDENGTFKPVKGWNEISGPVYDEEGNELISQAEFDEGLVTRTGQRIRQVGTMGSNMAGAAVGMGKQLFTNMMGKLGFERSNEQASSHVSAVRGRGTNMNGVERRLDRIYKLLSQKFGMEIEDEELDDAGGPAMRKNSLEDKARQAAASQSDRVQKAIIDIGDTLTGKSKKKGEGEEKGKKPGLFGKLYDMMGSIGGFFKNPLGSLLGMVGGSMAASVKRLGTIGSALFSGVLGIGSPIFKLLSGGIKMLGGLLGPIAKMAGSGIAGLFGMGGPGGRGGKLNKGMGRFGALLGGSALAYNLLTGDDSSSTPTEENMFNQKRPVTTADQIEDAANWIPQIGIGTTVLEAVMPKSWIDGIKNTGVYWTDDGQFFTDRRDAEQHMANSEGYKYNGTTYRTTLLANSIQKRLRFAMYGIREWRSDLAERVQRLEMMLLPHVNVGSGSAGFSKPEAVAEVFRQFVENSAPVPRDNINTWFQARFKPIFLTFVAAANAARFGDLQEYDAGQTHEVVLVAERVQEAVGHMSTNPYTIDVPIDQDTGTMSRIATTGEVADLMNELRKAYPAEKKADGLKLRTYDEQRQANLNPEVSDNKVVAWFQNKFGNESLIRSQEHIDKTFAVTAEIKDIDISDLHKDGDTEIEPFTLARLAVYGNDANINWRVDAVLKLERYCEENMVLSNGLGKLEIPLESVLALFKPMFRIKTELMMANWKAWFESRFLPVLQKYYALVYKQRGSSPKQGWRQLSNSNKAEIAKVLSEIMVMVDGEETSVWNVKASPFEGAQSGTDSDRADTYIKSLNSDAMKAALRDPVMEEAASKAIGEQLQDKSEARKQAEQARIAELTAMRMKRREQAGKQGGTFGGNNYASNGFANAFPPGGMGTTPGTVGAGSGGQYSGGFSEGWEMDPTLKAGDDQGLSMTPEQGEQLLLQGLLRAGITDNKQIALALALAKVETGNYKSTVENTNWSAPTLKKYFRNIPDMATAEKVAAMPPEQRAMYVYGRAPKGPTLGNEKPEDGWLYRGRGLFQLTGKANYEKYKRETGIDVVSNPRLVSEDPNVVADSAVRYLLGNKAIKSIATTGDFDSAVRGINGGNSVPFTDERRKAYTEYLAKLQNGQIKAAGPTKTSDFAPTSGGEDKIADVPNAADQNVPKAAEEKVASTKKTHKQEVDELLDKSSVNQQKAATASPPVSPSAAPTAAVTNPVPSPAPVQAPTPKPSAPAPVSQPAGPTTVSSVGPAPKPAPKQTGTGTQAVSDEGAQQLLSGIISQLGRLNDLMASQGKGGRPNTVGLG
Physico‐chemical
properties
protein length:2353 AA
molecular weight: 256300,60840 Da
isoelectric point:6,22276
aromaticity:0,07140
hydropathy:-0,47267

Domains

Domains [InterPro]
DC_0124
STR
1–2069
DC_0124 DC_1796
Coil
Unmapped
75–98
Coil G3DSA:1.10.530.10
IPR023346
STR
1997–2176
IPR023346
YP_010668714.1
1 2353
Architecture
STR
RBD
STR 1-2176 | RBD 2177-2353
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage D3
[NCBI] 		2593327 Uroviricota > Caudoviricetes > Chimalliviridae > Ludhianavirus D3 >
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010668714.1 [NCBI]
Genbank nucleotide accession
NC_070957.1 [NCBI]
CDS location
range 222452 -> 229513
strand -
CDS
ATGTCATATGAAGATGATCTCGGTCTCGATGATTGGGATGACCCGTTTGCGGGTGATTTCGATCTCGATGGAGATTTTGATATCGATCCTTTCAAAGGTAAAGGATTCGTGTCAAGTATGGCGTCGGGGTTCTTGGGTGGACTCGTTAATGAAACAGTAGGGTCAGGTGCAGCGATCACTAGATCACTCCGCACTATTTTGCCCAACACTTTCAGTAACGCTTTCGACCGAACCAACCGTGCCATCGAACGCTACGATGAACTCAAGACAGAGCTCAAAGAGCAAAACTACGAATCGGTCAGATCATTACAAAGCATTGCCGGCCAGCTTTCCAACCGTTTCGGTGAGAAGTTACCTGGCGGCCTTCGTAACAAAATGGATGACTTTTCCCAGAAAGATTTCTCTGACTGGGAGAAGAGTGATGGGTCTTATAATAGCATGGAGGGTATTGAAGAAGAGTCTGATTATGACTTGACTTTGGTACTCGACAGCGTTATGAGTCGTCAAGAAGGGTTGTTCTCAGAAATGACGAACTCCCTCAACGTAATGTCTGCAAACGTTGGCGGTCAAATCAGTTCTGCCGTCATGGCCGGTAACCGCCAACTTGTCAATATCGAAACCAGTGTTCGTGATCTTAACGATTACCAGCGCAACGTACAGTTCAAAATCGAACAGACCAAATTGAACTTGATGGCGAAAGGCTATGTGGCTAACGTCAAGTACTACAAGTTCATGGAAAAGGGCATGCACGCCCAGGTTGCTGAACTGAAGAAGATCCTGAAAGGGACGATGATGTCTGATTACCAAAAGACATCGAACTTCACCGCTTCCAAACAGTACATGCGGGATTCCCTGTTTAGTACAGTAGGGCGTCGTGTTGGCGGCCTGACTGGTCTCATCAGGGATCGTTTTGGTAAAGAAGCCAGGCAAGATGCTTCAGATAGCGCCAGTAGTGTGTTGGGAATGGTCGCCGACATGCTCGAGATGTCTGACGGTATGCCAGTATCTGCTGGGATGTTAGGAGACATGGCTGGTCGAGGTTTAGCAGGCGCTGCTGTCCGTAACCTTCCCAACTTCTTTGCCCGAGGTCCTGGTAAAAGAATGTTGGAAAGCCTTGCCAAGAAAAACCCAGCTGAAGCAAAGGCATTGCGACGTCAATGGGGGCGACTCTCCAACACAGGTTCGAAAGCTTCGTACATGTCTAACGCCGGAGTTGGCCTGATCAACTTCATGGCTGAAGACTACCAAGCAATGGACGAGATGCCGTTCATTGATTACGAAGACTACGTTGCCAGTCTTCCTCCCGACAAACAACCCATGAGTAAAGCCAGGTGGACAATTCAGAACGCCGCGAGTAACCGCGCTAAAGCCGCAATGAACTCGTTTATGTCTGAGATGAACCAGGCTAAAGGTACCCAGTACACTCTCAAGAAACGTAACCCACGTGATTTGGTCGATGCTGGTATCTGGACTCAGGGTAACAACGTCACACTGAATGAAGTAATACCTGGTTTGATTTCTCGTACCAACCAACTGTTGGAGATGATCAGAACTGGTGACAGTAATGCCGAGTTGGTTACTTACAACTACATGCGTGGTCAGTTCCAGAACGAAACCAACAAACAGATCGCTGTTCAAGCCGACCTGATGCCCGCCGCTGAATTCGATCGGTATGCGACTGCTGCTCTTGAGTTCGTTGATGACCTGGATCCCAAGAAGACGTTGTCCCAGGGAGCCCGTAAAGCATTTGCTAAGGTAATCGCAAGAGACGTTGACCGAGAGAAGAACTTTAACCCGTTCTACTATATCGGGGACATTCCTGGTATCTCTGGCCCGATGCTCGACGAGATCCATGCGGTGGTACGTCGTCACTTTGGGTTGCGTGATCAAGACATTGCTCGCTTCAACGAGACCACAGGTTTCGAGCGTATGCAAGTGATGACAGAGATGCGGAACTCCAGGTATCAAGAGCGTCTCAATAAAGCAGGGTCCGCTGCAACCAACCTGAAAGACCTCGCTCCGAATATCGCTGAACGTATCGACATGCTCAGGGCCACTGGTAATGAACAGTTGCTTCGTGACCTTGGTGTGATCTATACAGAGAACGGTATCGACAAGGTTGATATGGAAGTATTCCACGAACGTATCGGCATGTTCATGGACGATCCTAACAACCCAGCGCTCAGAGGGATGAATCCCAGCGACAAAACTCAAGGTAAGAAAACCAGGAACAGTTTCCACATTCCTGATCGCCCCGCTCCGACCAATGATGGAAAGCGTACTGAAGGTGCCTCCTTCGCTGGTCTCTCCAGTTCTCTCAACACACTGACAGAGAAACTGGACGTGTTGGCTAGCAGCAACATGTCTTCCAAGTCCGGTAAGCCGGATACGGCATACATGGACACTCAGACCGGAGAGATCGTTTCCAACACATCCAAGATTGCAGAAAGTAATCAGCGGATGGAAACAATCCTTTCTTCACTTCTGGATCTTGCTAATAAAGGCAAGTTGTTCTCAGGTGCTCCAAAGAACGCCAATGAGGAACGCCAAGAAGAGCAAGCTAAAGAAGGTCTGATGAGTAAGATCAAAGGTCTGTTCCCGGAAGGTATGTTCGGTCGCGGTATGGACTTACTGGTCAAGAACTCTCCGATAGTGTTGGGTGGCGTACTTGGTGGCATTGCCTCCAACTTTGCATCTAACCCTATTGCCGCTGCATCTATGGCGGTGGGTGGTCTGGCTCTGGGCGGTCTCGTTCAGTACTGGGGTAACAAGGACCGTAAAGAAAAAGTCAGTGCGAACGAACCTTCTGATGATGAAGACATCGTAGATGAAAACGGTGAAAGCATTCTGAAGTCAGCAAAGCTCAAAGCTGGTGAGTACATTGACGCGATCACTAAGCGTGTTATTAACACGTACCGTGAAATTAAAGGTCCTGTCATTGACGTGGTATCCAAAGCAATCATCACAGTTCGTGAACTGGGTGGTCGCATCTTCGGTCCTGATGGTCGCGCTGTAGTGCTTCGTGGGATCGAAACCGCTAAGGGGATGATTGTCAATGCCTACAACTTTGTGAACCCAATCGGTAAGCTCCGCGCCGGTATCGACATGGGTAAAGAAATCATCTATCAACAAGACGTCTTTGTGAAAGGTGATCTCCAAAACCCTCGTCTCCGCGCAGTAGGGTTTAAGAACGTTGAGTACTGGAAAGATGAGAACGGAACTTTCAAACCTGTCAAGGGTTGGAACGAAATCTCTGGTCCAGTTTACGATGAAGAAGGTAACGAACTTATCTCCCAAGCCGAGTTTGATGAAGGTTTGGTAACTCGTACAGGTCAACGTATCAGACAAGTGGGAACCATGGGTTCTAACATGGCTGGTGCTGCTGTCGGTATGGGTAAACAACTCTTTACCAACATGATGGGTAAACTTGGTTTCGAGCGTTCTAACGAGCAAGCCAGCTCACATGTCTCTGCGGTTCGTGGTCGCGGTACCAACATGAACGGGGTTGAGCGTCGTCTTGATCGTATCTACAAACTCCTTTCCCAAAAGTTTGGCATGGAGATTGAGGACGAAGAACTTGATGACGCTGGTGGTCCGGCGATGCGTAAGAACTCCCTTGAGGATAAAGCGCGTCAGGCCGCAGCATCGCAATCTGATCGAGTCCAGAAAGCAATCATCGATATTGGTGATACACTCACCGGTAAGAGTAAGAAGAAAGGGGAAGGTGAAGAGAAAGGTAAGAAACCTGGTCTCTTTGGCAAGCTCTACGACATGATGGGTTCCATCGGCGGATTCTTCAAGAACCCACTGGGTTCATTACTCGGGATGGTTGGCGGTTCCATGGCTGCCAGTGTGAAACGTTTAGGGACAATTGGAAGTGCGTTGTTCTCTGGTGTGTTGGGTATCGGTTCTCCCATCTTTAAACTTCTTAGCGGAGGTATAAAGATGTTGGGTGGTCTGTTAGGTCCCATCGCCAAGATGGCCGGTAGTGGTATCGCTGGACTGTTTGGTATGGGTGGTCCTGGTGGGCGAGGGGGTAAACTCAATAAAGGGATGGGTCGTTTCGGCGCACTCCTTGGTGGTAGTGCTCTAGCATACAACCTGTTGACAGGTGACGACAGTTCTTCCACACCTACTGAAGAGAACATGTTCAACCAGAAACGTCCAGTGACCACTGCTGATCAGATAGAGGATGCTGCAAACTGGATTCCTCAGATCGGTATCGGGACCACGGTTCTTGAAGCAGTAATGCCCAAGAGTTGGATTGACGGTATCAAGAACACTGGTGTGTACTGGACCGATGATGGACAGTTCTTCACAGACCGTCGTGACGCCGAACAGCATATGGCTAACTCGGAAGGGTACAAGTACAACGGCACCACTTACCGGACAACTCTGCTGGCCAACTCCATTCAGAAACGTCTTCGTTTCGCGATGTACGGCATTCGTGAATGGCGGAGTGATTTAGCAGAACGTGTACAACGTCTCGAGATGATGTTGCTCCCGCATGTTAATGTGGGTAGTGGGTCAGCAGGTTTCAGTAAACCTGAGGCGGTCGCTGAAGTCTTCAGACAGTTCGTTGAGAACTCGGCTCCGGTTCCACGTGATAATATCAACACTTGGTTCCAAGCGCGGTTCAAACCCATCTTCTTGACTTTCGTTGCCGCGGCTAACGCTGCAAGGTTTGGCGATCTTCAAGAGTACGATGCCGGTCAGACCCATGAAGTAGTTCTTGTCGCAGAGCGTGTACAGGAAGCCGTTGGCCACATGTCGACCAATCCTTACACTATCGACGTCCCGATTGACCAAGATACTGGGACGATGTCAAGAATTGCTACTACTGGCGAAGTCGCTGATTTGATGAATGAACTTCGTAAAGCTTATCCAGCCGAGAAGAAGGCAGACGGTCTCAAGCTGAGGACTTATGATGAGCAACGTCAAGCCAACCTGAATCCGGAAGTATCGGACAATAAGGTTGTCGCTTGGTTCCAGAATAAGTTCGGCAACGAGTCGTTAATCAGATCACAAGAACACATCGACAAAACCTTCGCTGTCACAGCGGAAATTAAGGACATCGACATATCTGACCTCCACAAAGATGGAGACACAGAAATCGAACCATTCACGCTTGCTCGTCTTGCCGTGTACGGTAACGATGCCAATATCAACTGGCGTGTAGATGCAGTTCTGAAACTTGAACGTTATTGCGAAGAGAACATGGTTCTTTCCAATGGGCTGGGGAAACTCGAAATCCCACTGGAGTCTGTACTGGCTCTCTTCAAGCCGATGTTCAGGATCAAAACAGAACTGATGATGGCGAACTGGAAGGCTTGGTTCGAATCACGTTTCCTCCCTGTACTCCAGAAGTATTACGCACTGGTTTACAAACAACGTGGGTCATCTCCGAAACAAGGTTGGCGTCAGCTCTCTAATAGCAACAAAGCCGAAATAGCTAAAGTGCTGTCAGAGATCATGGTAATGGTCGATGGTGAAGAGACTTCTGTCTGGAACGTGAAAGCGAGTCCGTTCGAAGGTGCTCAATCCGGTACCGACAGCGATAGGGCTGATACTTACATTAAGTCGCTTAACAGCGATGCAATGAAAGCAGCGTTGCGCGACCCGGTAATGGAGGAGGCTGCTTCTAAAGCAATCGGTGAACAACTCCAAGATAAGTCCGAAGCCAGGAAACAAGCTGAACAGGCCCGTATTGCAGAACTGACTGCCATGCGTATGAAACGCAGGGAACAAGCCGGTAAGCAAGGTGGGACTTTCGGTGGAAACAACTACGCAAGCAATGGCTTTGCTAATGCCTTCCCTCCTGGTGGAATGGGAACTACCCCAGGGACAGTAGGTGCTGGTAGCGGTGGTCAGTATAGTGGTGGGTTCAGTGAAGGCTGGGAAATGGATCCCACTCTGAAGGCAGGTGATGACCAAGGTCTCTCCATGACTCCGGAACAGGGTGAACAACTCCTCCTTCAAGGTCTGCTCCGTGCTGGTATCACAGACAACAAGCAGATTGCTCTCGCTCTGGCACTTGCCAAGGTTGAAACGGGTAACTACAAGTCCACGGTAGAAAACACCAACTGGTCTGCACCAACCCTGAAGAAGTATTTCAGGAACATACCAGACATGGCTACAGCGGAAAAGGTAGCAGCAATGCCACCAGAACAACGTGCGATGTATGTGTATGGTAGAGCACCCAAAGGTCCCACACTCGGTAACGAGAAGCCTGAGGATGGTTGGTTGTATCGTGGTCGTGGTTTGTTCCAGCTCACTGGTAAAGCCAACTACGAAAAGTACAAGCGTGAGACAGGGATAGACGTCGTAAGTAACCCACGACTGGTATCCGAAGATCCTAACGTTGTAGCAGACTCCGCTGTTCGTTACCTTCTGGGTAATAAAGCGATCAAGTCCATTGCGACGACTGGTGACTTCGATAGTGCTGTTCGTGGCATCAACGGTGGTAACTCTGTTCCCTTTACTGACGAACGTCGTAAGGCATATACCGAATATCTTGCTAAACTCCAGAACGGTCAAATCAAAGCAGCGGGTCCGACAAAGACCTCCGACTTTGCACCAACCTCTGGCGGTGAAGATAAGATAGCGGATGTTCCTAACGCTGCCGATCAGAATGTCCCCAAGGCCGCTGAAGAGAAAGTCGCATCTACCAAGAAGACTCATAAGCAGGAAGTCGATGAGCTCTTGGATAAGAGCAGCGTTAATCAACAGAAAGCTGCGACAGCGTCTCCGCCGGTATCTCCTAGTGCGGCACCAACCGCCGCTGTTACTAACCCAGTTCCGAGTCCGGCACCAGTTCAGGCTCCGACTCCCAAACCGAGTGCTCCGGCACCAGTAAGTCAACCGGCAGGCCCTACCACTGTTTCTAGTGTTGGTCCGGCTCCCAAACCAGCTCCCAAACAGACTGGCACGGGAACACAAGCAGTCAGTGATGAAGGAGCTCAGCAATTGTTGAGTGGGATCATCAGTCAGCTTGGTAGGTTGAATGACCTGATGGCCAGCCAAGGTAAAGGTGGTCGACCGAACACTGTTGGATTAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
65302e1dad20489f3471af1c093cf5913c1f7febf4146d769e72101fe738f7b8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5078
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila bacteriophage D3 Rai,S., Tyagi,A., Kumar,N. and Singh,N. 2020-06-10 — GenBank