Protein

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Genbank accession
CDI06816.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,76
Protein sequence
MGLEVATYINQLVPTNPTGSDLKSFGDDHLRLIKSAIKNTFPNISQAVTVTAAQLNAVADTTQYVKPGMIVMWTGALAQIPAGWKLCNGVGTTSNGIPIPNLIGAFPWGIDGSSQAVGTRGGSANIVWDGFTEGTALTLAQIPSHTHTWRTRGATTLTGSAGGSGALTGGSGNAANTNLETGPAGQGQTHNHAVKINMPLGNIPPFCSVFFIIKN
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22138,77290 Da
isoelectric point:8,66489
aromaticity:0,06512
hydropathy:0,01628

Domains

Domains [InterPro]
SSF88874
60–214
SSF88874
CDI06816.1
1 215
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage TL
[NCBI] 		1406974 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CDI06816.1 [NCBI]
Genbank nucleotide accession
HG518155.1 [NCBI]
CDS location
range 35883 -> 36530
strand -
CDS
ATGGGTCTTGAGGTCGCAACTTATATTAACCAGTTGGTGCCTACGAACCCTACCGGCTCTGATCTGAAGTCCTTTGGGGATGACCATCTGCGACTCATTAAGAGTGCTATTAAGAATACCTTCCCCAATATTTCTCAGGCTGTCACTGTAACGGCAGCCCAGCTAAACGCAGTCGCTGATACAACCCAGTATGTTAAGCCTGGGATGATCGTCATGTGGACTGGTGCCCTAGCTCAGATCCCAGCAGGTTGGAAGCTTTGTAACGGCGTAGGTACTACCTCTAATGGTATCCCGATCCCTAACCTGATTGGGGCATTCCCCTGGGGTATCGACGGATCTTCCCAGGCTGTAGGTACTAGAGGCGGTAGCGCTAACATTGTATGGGATGGGTTCACTGAAGGGACTGCCCTTACCCTAGCCCAAATCCCATCACACACCCACACTTGGAGAACTAGGGGTGCTACTACCCTCACTGGTTCTGCGGGTGGCTCGGGTGCTCTGACGGGAGGCTCTGGTAACGCAGCCAATACCAACCTTGAGACTGGCCCTGCTGGTCAAGGTCAGACTCACAACCATGCAGTAAAGATCAACATGCCGTTGGGTAATATCCCACCGTTCTGTTCTGTGTTCTTCATCATTAAGAACTGA

Tertiary structure

PDB ID
73062cbf520664590b32fdb890868f29804526ae7796e8dd89d3c9662b452fd4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7447
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of a new Pseudomonas aeruginosa bacteriopphage TL Krylov,V.N., Pleteneva,E.A., Burkaltseva,M.V., Shaburova,O.V., Akulenko,N.V. and Kulakov,L.A. 2016-04-28 — GenBank