Protein

View in Explore
Genbank accession
YP_009997259.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MAGEITLPNVGLTAFWNLGDNSYKDGMDLNLTLMSVLAQAAILSQEAAVPGVPVAGGVYLATTDWSATVTTNSLQVYLNTTGFAPAAPPPGVTVRNSGEWIEIVPQEGWTLYDRAANKLITFDGAAWVDTVPASTLPDFTGNAGKHLAVNGTEDGTEWVDASGSAISISQDTATNHAVTDADLAGNKLLKMNNAAANTVTVPSGLTGTEPLTIVQTGAGQTTIVAGGGVTVSSLGGLLAISGQYGSATLIPNGADSYLLIGALA
Physico‐chemical
properties
protein length:264 AA
molecular weight: 26748,57110 Da
isoelectric point:4,05003
aromaticity:0,06061
hydropathy:0,20833

Domains

View on InterPro
Domain architecture
YP_009997259.1
1 264 aa
STR 92–128 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Ruegeria phage vB_RpoS-V18 [NCBI] · taxon 2218619
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Ruegeria pomeroyi DSS-3 [NCBI] · taxon 246200
Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Ruegeria

Coding sequence (CDS)

Genbank protein accession
YP_009997259.1 [NCBI]
Genbank nucleotide accession
NC_052970 [NCBI]
CDS location
range 18973 -> 19767
strand -
CDS
ATGGCTGGAGAAATCACCCTCCCGAACGTGGGCCTGACCGCTTTCTGGAACCTGGGGGACAACTCGTACAAAGACGGGATGGACCTGAACCTGACTCTTATGTCCGTCTTGGCGCAGGCGGCGATCCTGTCGCAAGAGGCGGCGGTCCCGGGCGTCCCGGTGGCGGGTGGGGTCTACCTCGCTACGACCGACTGGTCCGCCACGGTGACGACGAACAGCCTCCAGGTCTACCTGAACACGACCGGGTTCGCACCGGCAGCCCCTCCCCCCGGCGTTACAGTTCGGAATAGCGGCGAGTGGATCGAGATCGTGCCGCAGGAGGGCTGGACGCTCTACGACCGCGCCGCGAACAAACTCATCACCTTCGACGGCGCGGCTTGGGTCGATACGGTTCCCGCTTCTACGCTGCCGGATTTCACCGGGAACGCCGGGAAACATCTCGCGGTCAACGGGACCGAGGACGGGACCGAGTGGGTGGATGCGAGCGGTAGCGCGATCAGCATCTCCCAGGACACCGCGACCAACCACGCCGTCACCGACGCTGACCTGGCCGGGAACAAGCTGCTCAAGATGAACAACGCGGCGGCGAACACCGTGACCGTGCCCTCTGGACTCACCGGGACCGAACCGCTGACCATCGTCCAGACCGGGGCCGGGCAAACCACGATCGTCGCGGGCGGCGGCGTGACGGTGAGCAGTCTCGGCGGCCTCCTGGCGATCTCGGGCCAGTATGGCTCGGCTACCCTGATCCCGAACGGCGCGGATTCCTACCTCCTGATCGGGGCGCTCGCATGA

Genome Context

Tertiary structure

YP_009997259.1
ESMFold structure
Source ESMFold
pLDDT 88.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Diverse roseophages infecting R. pomeroyi DSS-3 Zhan,Y., Chen,F., Wommack,E.K. and Nasko,D. 2018-09-27 — GenBank