Protein

View in Explore
Genbank accession
YP_009009373.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MSIVIRRNNGDILWFDAITQYDVNYTATVTKHPVASGGFISDHTTTDNVVLNISGILSDADFNINRPANLGSLPTFQFDTGAHVPVDENGLYKPVSKQYTNNSAVVYPVTITDKSSINKILPEVIAQFTKDTIPDAFVTQQDKDKTAKAVQRELIRMWKEREEFQVLDLLEDFVIDSFGPCVLTNLTFREDESSGEALFPSMTIEQVVFTDLQEITVQVKTSNKGRKTGSITTKTGAAAETAPDHAPRTYTKDSKSSAVKPVGPTTQ
Physico‐chemical
properties
protein length:267 AA
molecular weight: 29425,64270 Da
isoelectric point:5,06216
aromaticity:0,07865
hydropathy:-0,32921

Domains

View on InterPro
Domain architecture
YP_009009373.1
1 267 aa
ATT 15–217 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Pseudomonas phage phiPsa374 [NCBI] · taxon 1458843
Uroviricota Caudoviricetes Vandenendeviridae Otagovirus Otagovirus Psa374
Host
Pseudomonas syringae pv. actinidiae ICMP 18800 [NCBI] · taxon 1104681
Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas

Coding sequence (CDS)

Genbank protein accession
YP_009009373.1 [NCBI]
Genbank nucleotide accession
NC_023601.2 [NCBI]
CDS location
range 46747 -> 47550
strand +
CDS
ATGTCTATCGTTATCAGACGTAACAACGGCGACATTCTGTGGTTCGACGCAATCACACAATACGACGTGAACTACACTGCGACAGTAACTAAACACCCCGTCGCCAGCGGCGGGTTTATCTCTGACCACACGACAACCGATAACGTTGTCTTGAACATCAGCGGTATTCTTTCTGACGCAGACTTCAACATCAACAGGCCAGCGAATCTCGGTTCGCTGCCTACCTTCCAATTCGATACTGGTGCTCACGTACCAGTTGACGAGAATGGATTGTACAAACCAGTTAGCAAGCAGTACACAAACAACTCTGCTGTTGTGTATCCAGTAACCATCACTGACAAGAGTTCTATCAACAAGATTCTCCCAGAGGTTATTGCTCAGTTCACAAAGGACACTATCCCTGATGCGTTTGTAACTCAACAGGATAAAGACAAGACAGCTAAGGCTGTACAGCGTGAGTTGATCAGAATGTGGAAAGAGCGTGAAGAGTTCCAAGTGCTTGATTTGTTGGAAGACTTCGTAATCGACTCCTTCGGGCCTTGTGTTCTCACAAACCTAACATTCAGAGAAGATGAGTCATCTGGTGAGGCTTTGTTCCCAAGCATGACAATCGAACAAGTTGTGTTCACTGACTTGCAGGAAATTACTGTGCAGGTGAAGACTTCTAACAAAGGCCGCAAGACTGGTTCGATTACAACGAAAACTGGCGCTGCTGCTGAGACTGCACCAGATCACGCACCAAGAACTTACACCAAAGACTCTAAGAGTTCTGCTGTGAAACCAGTTGGCCCAACAACACAATAA

Genome Context

Tertiary structure

YP_009009373.1
ESMFold structure
Source ESMFold
pLDDT 68.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas phiPsa374-like phages Warring,S., Malone,L.M., Easingwood,R.A., Rigano,L., Frampton,R.A., Lopez Acedo,E., Templeton,M.D., Kleffmann,T., Bostina,M. and Fineran,P.C. 2024-10 — GenBank