Protein

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Genbank accession
YP_009009373.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Seq2Symm
C6 confidence 0,844
C6 0,844
C2 0,008
C10-C17 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSIVIRRNNGDILWFDAITQYDVNYTATVTKHPVASGGFISDHTTTDNVVLNISGILSDADFNINRPANLGSLPTFQFDTGAHVPVDENGLYKPVSKQYTNNSAVVYPVTITDKSSINKILPEVIAQFTKDTIPDAFVTQQDKDKTAKAVQRELIRMWKEREEFQVLDLLEDFVIDSFGPCVLTNLTFREDESSGEALFPSMTIEQVVFTDLQEITVQVKTSNKGRKTGSITTKTGAAAETAPDHAPRTYTKDSKSSAVKPVGPTTQ
Physico‐chemical
properties
protein length:267 AA
molecular weight: 29425,64270 Da
isoelectric point:5,06216
aromaticity:0,07865
hydropathy:-0,32921

Domains

View on InterPro
Domain architecture
YP_009009373.1
1 267 aa
ATT 15–217 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Pseudomonas phage phiPsa374 [NCBI] · taxon 1458843
Uroviricota Caudoviricetes Vandenendeviridae Otagovirus Otagovirus Psa374
Host
Pseudomonas syringae pv. actinidiae ICMP 18800 [NCBI] · taxon 1104681
Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas

Coding sequence (CDS)

Genbank protein accession
YP_009009373.1 [NCBI]
Genbank nucleotide accession
NC_023601.2 [NCBI]
CDS location
range 46747 -> 47550
strand +
CDS
ATGTCTATCGTTATCAGACGTAACAACGGCGACATTCTGTGGTTCGACGCAATCACACAATACGACGTGAACTACACTGCGACAGTAACTAAACACCCCGTCGCCAGCGGCGGGTTTATCTCTGACCACACGACAACCGATAACGTTGTCTTGAACATCAGCGGTATTCTTTCTGACGCAGACTTCAACATCAACAGGCCAGCGAATCTCGGTTCGCTGCCTACCTTCCAATTCGATACTGGTGCTCACGTACCAGTTGACGAGAATGGATTGTACAAACCAGTTAGCAAGCAGTACACAAACAACTCTGCTGTTGTGTATCCAGTAACCATCACTGACAAGAGTTCTATCAACAAGATTCTCCCAGAGGTTATTGCTCAGTTCACAAAGGACACTATCCCTGATGCGTTTGTAACTCAACAGGATAAAGACAAGACAGCTAAGGCTGTACAGCGTGAGTTGATCAGAATGTGGAAAGAGCGTGAAGAGTTCCAAGTGCTTGATTTGTTGGAAGACTTCGTAATCGACTCCTTCGGGCCTTGTGTTCTCACAAACCTAACATTCAGAGAAGATGAGTCATCTGGTGAGGCTTTGTTCCCAAGCATGACAATCGAACAAGTTGTGTTCACTGACTTGCAGGAAATTACTGTGCAGGTGAAGACTTCTAACAAAGGCCGCAAGACTGGTTCGATTACAACGAAAACTGGCGCTGCTGCTGAGACTGCACCAGATCACGCACCAAGAACTTACACCAAAGACTCTAAGAGTTCTGCTGTGAAACCAGTTGGCCCAACAACACAATAA

Genome Context

Tertiary structure

YP_009009373.1
ESMFold structure
Source ESMFold
pLDDT 68.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas phiPsa374-like phages Warring,S., Malone,L.M., Easingwood,R.A., Rigano,L., Frampton,R.A., Lopez Acedo,E., Templeton,M.D., Kleffmann,T., Bostina,M. and Fineran,P.C. 2024-10 — GenBank