Phage RBP Database

Genbank accession

YP_013604866.1 [GenBank]

Protein name

L-shaped tail fiber protein B

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,74

TF

Evidence RBPdetect2

Probability 0,69

Seq2Symm

C3 confidence 0,998

C3	0,998
C1	0,007
C7-C9	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MSRNLMPKSGAMAPYVVVNRDAAVAGVFSIDGEAGAVVLTSKYLQISKYNTDKAATDASINSINESIGNINTALGGINTTLNTKAAKGANNDITELNALTKAIKISQGGTGATTLDGAKKALQVERLRQQSNGTFIVSPNEKYSLFIYDSGDFGLIESSTAAVQALKVAFGGTGGTTPKAARKNLNVPVGALAEVIPNGENVLNYIAIAGQSGYYSSGDGVTHIPPVTEGWWTYNFHCHGVDINGAAQYGMLKATGLSGSTWTNVLDGTGNWKGWQEQFNSQSTVPVANGGTGANSIEGAKTKFGINRFSQTALDTRMSSPDAKKIFRIADGVWGAYNLETNQEIPLGIASGGTGANSAAQARRNLELSEWGLLQSISGRYPGGFNIDSIDFNSTLTVPPSPGSNIVGVRPFQQIPGLEDAWFFLETLVHPDPNYRTQRATLFTGAWKSSICTRTMDSGTWGVWQQVHGAFGLIADPIRDRATFKSMGIADGGAGSLVGGTIKGGAFTAWRDRPCGVLVEHEATDAAYAIWKSVKWGVDWVSGMDAVLWAAGGAQLSLYCKGAEYRFDSGGTAAAGQWVSTSDIRMKANLKEIENARDKVKSLVGYTYYKRSTLKEEKDTTYNIEAGVIAQDVQAVLPEAVYKIEPQKEDSMLGVSHAGVNALLVNAFNELNEVVEKQQQEIDELKELVKQLLAK

Physico‐chemical properties

protein length:	695 AA
molecular weight:	74109,28770 Da
isoelectric point:	5,94822
aromaticity:	0,08489
hydropathy:	-0,21540

Domain architecture

YP_013604866.1

1 695 aa

STR 419–467 · CHP 582–682 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

cd19958
STR

cd19958 IPR030392

IPR030392
CHP

IPR030392 Coil

YP_013604866.1

1695 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0195
STR

DC_0195

YP_013604866.1

1695 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
cd19958	STR	DC_0464	419	467	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
IPR030392	CHP	DC_0088	582	682	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	582	642	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	661	695	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Escherichia phage EscoHU1 [NCBI] · taxon 2881221

Uroviricota Caudoviricetes Demerecviridae Epseptimavirus Epseptimavirus EscoHU1

Host No host information

Genbank protein accession

YP_013604866.1 [NCBI]

Genbank nucleotide accession

NC_133119.1 [NCBI]

CDS location

range 83889 -> 85976
strand -

CDS

ATGTCACGTAATTTAATGCCAAAAAGTGGGGCTATGGCCCCCTATGTTGTAGTTAATAGAGACGCCGCGGTTGCCGGCGTTTTCTCTATTGACGGAGAAGCTGGTGCTGTTGTGCTAACTTCTAAATATCTACAAATTTCAAAGTATAATACTGATAAAGCTGCTACCGATGCATCTATCAATAGTATTAACGAATCAATTGGTAATATCAACACTGCGTTAGGTGGTATTAATACTACTTTAAATACTAAAGCTGCTAAAGGTGCTAATAACGATATTACAGAATTAAATGCACTTACTAAAGCTATTAAAATTTCTCAAGGTGGTACTGGTGCTACTACATTAGATGGTGCTAAGAAGGCCTTACAAGTTGAACGCCTTCGTCAGCAGAGTAATGGAACTTTTATTGTATCTCCCAATGAGAAATATTCTTTATTTATATATGATAGCGGAGATTTTGGTTTAATTGAGAGTTCTACTGCGGCTGTACAAGCATTAAAAGTTGCATTTGGTGGTACTGGAGGAACTACTCCAAAAGCTGCAAGAAAAAATCTTAATGTTCCAGTTGGCGCCTTAGCTGAAGTAATACCTAATGGGGAGAATGTTCTAAATTATATCGCAATCGCTGGACAAAGTGGATACTACTCTTCTGGAGATGGTGTTACACATATTCCTCCAGTTACTGAAGGATGGTGGACATATAACTTCCATTGCCATGGTGTGGATATTAATGGTGCTGCTCAGTATGGTATGTTAAAAGCCACTGGATTATCTGGAAGTACTTGGACTAACGTTCTGGATGGTACTGGTAATTGGAAAGGTTGGCAAGAGCAATTCAATTCACAGTCTACTGTACCAGTTGCTAATGGTGGTACAGGGGCTAATTCTATAGAAGGGGCTAAAACTAAATTTGGTATTAATAGATTTAGTCAGACTGCCCTAGATACTAGAATGAGTAGTCCTGATGCTAAGAAGATATTTAGAATAGCAGATGGGGTTTGGGGAGCTTACAATCTAGAAACTAATCAGGAAATACCGCTAGGAATAGCTAGTGGAGGTACCGGGGCTAATTCAGCTGCTCAGGCTAGAAGAAATCTAGAATTAAGTGAGTGGGGCTTGCTACAGTCTATATCTGGAAGATATCCAGGAGGTTTTAATATTGACAGTATAGACTTTAATTCAACCTTAACAGTTCCTCCTTCTCCTGGCTCTAATATTGTAGGCGTACGCCCTTTCCAACAAATCCCAGGATTAGAAGATGCTTGGTTCTTTCTAGAAACTTTGGTCCACCCTGATCCAAATTATAGAACTCAAAGGGCTACGTTATTTACAGGTGCTTGGAAAAGTTCTATCTGCACACGTACAATGGATAGTGGTACTTGGGGTGTTTGGCAACAAGTACATGGGGCATTTGGTTTAATAGCTGATCCAATACGGGATCGAGCTACCTTCAAAAGTATGGGTATAGCAGATGGTGGTGCTGGAAGCTTAGTAGGTGGTACTATTAAAGGAGGGGCATTTACTGCTTGGAGAGATAGACCTTGTGGAGTGCTAGTAGAGCATGAAGCTACGGATGCAGCGTACGCTATATGGAAAAGTGTTAAATGGGGTGTGGATTGGGTATCTGGTATGGATGCTGTGCTATGGGCTGCTGGTGGTGCACAGCTTAGCTTATACTGTAAAGGTGCTGAATATCGCTTTGATAGTGGTGGTACTGCTGCTGCAGGTCAATGGGTAAGTACTTCTGACATACGCATGAAAGCCAACCTCAAGGAAATTGAGAATGCTCGCGATAAGGTTAAATCTCTGGTAGGCTATACATATTATAAGAGAAGTACCCTTAAAGAGGAAAAAGATACTACCTATAACATTGAAGCTGGTGTTATAGCCCAGGATGTACAGGCTGTTCTTCCAGAGGCAGTATATAAGATCGAACCACAAAAAGAAGATAGTATGCTCGGCGTATCTCATGCTGGTGTAAACGCTTTGCTAGTTAATGCTTTTAACGAGCTTAACGAAGTGGTTGAGAAGCAGCAGCAAGAAATTGATGAACTCAAGGAATTGGTAAAACAACTTCTTGCTAAATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)