Protein

View in Explore
Genbank accession
YP_009844292.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,35
Protein sequence
MAKQKGDIRRQASLGTELKRNINNNNSTSDLVLARVSKVDYENNSIEYIVQTNGMNNSSGAISNGGARLPVSFGGKNGYGNPYGSVNTIRVNDIVLIGFVGGKKNSPIVISKYLSDEDAYMLSDYSGDQYMAPNDEDMYDKTNSYRDLYPDLTYSYHNGNGYYEHTFSGNSFLVMDDYDIKGNFVDYPVGEVDASTYYSLRGNKYKDGTNFDTLNYLAPNIFFKHQGSYLLDDNGEEKLDHHQTNVSISPQGTTRLTTFHDDDKWLSLFSIDGDNGEISLTRENDNSINIGDTSDSNATFTIDKDNNLILSSGNTKMTLSDGHHIIASDLDTDSDKIDLYQSALNNKNSISGINNSINSINNNMSSSSSSLSTVNDQVNMSASSISQTNAIASSIYGNATTSVNMFSLASSIANTEIDSNTGFYKENNGSLSTPKMAAIRNFNYILTAYSVTSPITIKIAFYDLNKNFINEKEVTGNSGDISVTAISPDNAVYISASVSSNAFKVKLEQADKVTSWSPSIVDLYTNNNTVLELLSAAKIAQADTNAKMSTVTSNNYLNSLLQYNNDSQILASDKDSLANSWDLFKADYKVVVSYATKYSVDLTTANSYYTPLENSIEKDILVDRTSNSPAGAYTSNIKGLQSALDKVIPNIISSALNSVITAQNTLATNTSSYRNLLLGTTTNISATGDQKLYSLSNGASQISGSTILSFTFNTTDVNSNFSINEVILNNDGSINKEVVLIDNLPNNMTNNVVSSFIQPIVPTLNQKADIYIRFSSYRQPVQISNMIMATSNNTKVTWVAAPEDISSTTTDKLATFKITDDQITSAVFDHLLEQSDVFTQTAEKAQIAVTQGDVSAGLSIEAGKMVWFGKEIDILGDIVDNNKITGAQFVDTSWSSTTGNFSITNTGVTTGMSLNSSTITNTTFNLSASGEIIGNYSIADSTTSNIPIKSSGKSIEDNSGIKSSGSKQSYINGSWSGYDDSLNLSSSVSNKEVSNISPSYLEYKILNTSGNNLMDTKVSSDGVYLSDISNSIKYTSKGISANKTLSIESPAISSKGIYNNTSSASANLTIDDSGIIHRVSSSEKYKKNISPIDDIIDKGKALLTITPKKWQDKNNDKDTQVGLIAEDLEKVGLSDFLFYKDGKPEGIQYDRLFILLMPLIKNILEENNG
Physico‐chemical
properties
protein length:1169 AA
molecular weight: 126975,39400 Da
isoelectric point:4,67219
aromaticity:0,08041
hydropathy:-0,38050

Domains

View on InterPro
Domain architecture
YP_009844292.1
1 1169 aa
CHP 1081–1169
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Lactobacillus phage SAC12B [NCBI] · taxon 2510941
Uroviricota Caudoviricetes Herelleviridae Tybeckvirus SAC12B
Host
Lactobacillus brevis [NCBI] · taxon 1580
cellular organisms Bacteria Bacillati Bacillota Bacilli Lactobacillales

Coding sequence (CDS)

Genbank protein accession
YP_009844292.1 [NCBI]
Genbank nucleotide accession
NC_048754.1 [NCBI]
CDS location
range 84829 -> 88338
strand +
CDS
ATGGCTAAGCAAAAGGGGGATATCCGTAGACAAGCCTCTTTAGGAACAGAATTAAAAAGAAATATAAACAATAATAATTCAACTTCTGATCTAGTATTAGCTAGAGTTTCTAAGGTAGACTATGAGAATAATAGTATTGAATATATTGTACAAACAAATGGTATGAATAACAGCTCGGGAGCTATATCCAATGGAGGCGCCAGACTTCCTGTTTCCTTTGGTGGTAAAAATGGCTATGGAAATCCTTATGGATCAGTTAATACGATTAGGGTTAATGATATTGTCTTAATTGGCTTTGTTGGGGGTAAAAAGAATTCCCCTATTGTAATAAGCAAATATTTGTCTGACGAAGATGCCTATATGCTATCCGATTATTCAGGGGACCAATATATGGCTCCTAATGATGAAGATATGTATGATAAAACTAATTCATATAGAGATTTATATCCTGATTTAACTTACTCCTATCATAATGGTAATGGATATTATGAGCATACTTTTAGTGGAAATAGCTTCCTAGTAATGGATGATTATGATATTAAGGGCAATTTTGTAGACTATCCAGTAGGCGAGGTTGATGCTTCTACTTACTACTCATTACGGGGAAATAAATATAAAGATGGAACAAACTTTGACACTTTAAATTATCTAGCTCCAAACATATTTTTTAAACATCAAGGAAGCTATCTATTAGATGATAACGGAGAAGAAAAACTAGATCATCATCAAACAAATGTTTCTATATCACCCCAAGGAACGACTAGACTAACTACTTTTCATGATGATGATAAATGGCTATCGTTGTTTTCTATAGATGGAGATAATGGGGAAATAAGTCTTACTAGAGAAAATGATAACTCTATCAATATTGGGGATACTTCTGATAGTAATGCCACATTTACAATTGATAAAGACAATAATTTAATATTATCATCAGGTAATACAAAAATGACGCTTTCTGACGGTCATCATATTATTGCTAGCGACTTAGATACTGATTCAGATAAAATAGATCTTTATCAATCGGCTTTAAATAACAAGAATTCAATATCTGGTATAAACAATAGTATAAACTCTATTAATAATAATATGTCTTCTAGTTCCAGCTCATTATCTACTGTGAATGACCAAGTGAATATGTCAGCATCTTCTATTTCTCAAACAAATGCTATAGCTAGTTCAATTTACGGGAATGCAACTACTTCTGTAAATATGTTTTCTTTAGCAAGTTCTATTGCGAATACTGAAATAGATAGTAATACTGGATTCTACAAGGAAAATAATGGTAGCTTATCAACTCCCAAAATGGCGGCAATAAGAAACTTTAATTATATATTAACGGCTTACTCTGTTACTAGTCCAATTACTATAAAGATAGCCTTTTATGACTTAAATAAAAACTTTATAAATGAAAAAGAAGTTACAGGTAATTCAGGAGATATCTCTGTAACCGCGATTTCACCAGATAATGCTGTATATATTTCTGCAAGTGTAAGTAGTAACGCCTTTAAAGTAAAATTAGAGCAAGCAGATAAGGTTACTAGTTGGTCTCCATCAATTGTCGATTTATATACAAATAATAATACGGTATTAGAACTATTAAGTGCGGCTAAAATAGCACAAGCAGATACTAATGCCAAAATGTCTACGGTAACTAGCAACAATTATTTAAATAGTCTATTACAGTATAATAATGATTCACAAATATTAGCCAGTGATAAAGATTCTTTAGCTAATTCTTGGGACTTATTCAAAGCAGATTATAAAGTAGTAGTATCCTATGCTACTAAATACTCAGTAGACTTAACAACTGCCAATAGCTACTATACCCCTTTGGAAAATTCTATTGAAAAAGATATTCTGGTTGATAGAACGTCTAATAGCCCAGCAGGAGCTTATACAAGCAATATTAAAGGCCTTCAATCTGCACTTGATAAAGTTATACCTAATATAATTTCATCAGCCCTGAATAGTGTCATAACAGCTCAGAATACGCTTGCTACAAATACTAGCAGTTATAGAAATCTATTACTAGGAACCACTACAAATATTTCTGCAACTGGAGATCAGAAATTATACTCCTTATCAAACGGAGCTAGTCAAATATCTGGAAGTACTATACTATCTTTTACTTTTAATACTACTGATGTTAATAGCAATTTTTCTATTAATGAGGTTATTCTAAACAATGATGGATCTATTAATAAAGAAGTTGTTTTAATTGATAATCTTCCAAACAATATGACTAATAATGTTGTTTCTAGCTTTATACAGCCTATTGTGCCTACTTTAAATCAAAAGGCGGACATTTATATAAGGTTCTCTTCTTATAGGCAACCTGTTCAAATTTCTAATATGATTATGGCAACATCAAATAATACTAAAGTAACATGGGTTGCGGCTCCTGAAGATATTTCTAGCACTACTACAGACAAACTAGCTACCTTTAAAATTACCGATGACCAAATTACTAGCGCTGTATTTGACCATCTTCTAGAACAGTCTGATGTATTTACACAAACGGCTGAAAAGGCTCAAATCGCCGTCACCCAAGGAGATGTTTCTGCGGGATTATCAATTGAAGCAGGTAAGATGGTTTGGTTTGGTAAAGAAATAGATATTTTGGGAGATATTGTTGATAACAATAAAATAACAGGAGCTCAATTTGTAGATACTTCTTGGTCTTCTACTACTGGAAACTTTAGTATTACTAATACTGGGGTAACTACTGGCATGTCGTTAAATAGTTCAACAATAACTAACACAACTTTTAACTTATCTGCATCTGGGGAAATAATTGGCAACTATAGCATAGCAGATAGTACTACTTCTAATATTCCTATTAAGTCTTCCGGTAAGTCAATAGAAGATAACTCTGGTATTAAATCTTCTGGCAGTAAACAATCATATATTAATGGATCATGGTCTGGATATGATGATAGTTTAAACTTATCAAGTTCCGTTAGCAACAAGGAAGTATCCAATATTTCTCCTAGCTATTTAGAATATAAAATACTAAATACCTCGGGCAACAATTTGATGGATACCAAAGTATCTAGTGATGGTGTATATTTAAGTGATATTAGTAATTCTATTAAATATACCAGTAAAGGGATATCTGCAAATAAGACATTATCAATAGAGTCTCCTGCTATTTCTAGCAAGGGAATATATAATAATACTTCTAGTGCTTCTGCAAACTTAACTATAGATGATTCTGGAATAATTCATAGAGTATCATCTTCTGAAAAGTATAAAAAGAATATTTCACCAATTGATGATATAATAGATAAAGGTAAAGCACTATTAACTATTACACCTAAGAAATGGCAAGATAAAAATAATGATAAAGATACCCAAGTAGGATTGATTGCCGAGGACTTAGAAAAAGTAGGATTATCTGATTTCTTATTTTATAAAGATGGTAAACCCGAAGGAATTCAATATGACCGACTATTCATTCTTTTAATGCCATTAATCAAAAATATTTTGGAGGAAAACAATGGATAA

Genome Context

Tertiary structure

YP_009844292.1
ESMFold structure
Source ESMFold
pLDDT 60.0
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation of virulent Lactobacillus brevis phages Feyereisen,M., Mahony,J., O'Sullivan,T. and van Sinderen,D. 2019-04-26 — GenBank