Protein

View in Explore
Genbank accession
YP_009844292.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,35
Seq2Symm
C3 confidence 0,999 truncated
C3 0,999
C1 0,004
C2 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAKQKGDIRRQASLGTELKRNINNNNSTSDLVLARVSKVDYENNSIEYIVQTNGMNNSSGAISNGGARLPVSFGGKNGYGNPYGSVNTIRVNDIVLIGFVGGKKNSPIVISKYLSDEDAYMLSDYSGDQYMAPNDEDMYDKTNSYRDLYPDLTYSYHNGNGYYEHTFSGNSFLVMDDYDIKGNFVDYPVGEVDASTYYSLRGNKYKDGTNFDTLNYLAPNIFFKHQGSYLLDDNGEEKLDHHQTNVSISPQGTTRLTTFHDDDKWLSLFSIDGDNGEISLTRENDNSINIGDTSDSNATFTIDKDNNLILSSGNTKMTLSDGHHIIASDLDTDSDKIDLYQSALNNKNSISGINNSINSINNNMSSSSSSLSTVNDQVNMSASSISQTNAIASSIYGNATTSVNMFSLASSIANTEIDSNTGFYKENNGSLSTPKMAAIRNFNYILTAYSVTSPITIKIAFYDLNKNFINEKEVTGNSGDISVTAISPDNAVYISASVSSNAFKVKLEQADKVTSWSPSIVDLYTNNNTVLELLSAAKIAQADTNAKMSTVTSNNYLNSLLQYNNDSQILASDKDSLANSWDLFKADYKVVVSYATKYSVDLTTANSYYTPLENSIEKDILVDRTSNSPAGAYTSNIKGLQSALDKVIPNIISSALNSVITAQNTLATNTSSYRNLLLGTTTNISATGDQKLYSLSNGASQISGSTILSFTFNTTDVNSNFSINEVILNNDGSINKEVVLIDNLPNNMTNNVVSSFIQPIVPTLNQKADIYIRFSSYRQPVQISNMIMATSNNTKVTWVAAPEDISSTTTDKLATFKITDDQITSAVFDHLLEQSDVFTQTAEKAQIAVTQGDVSAGLSIEAGKMVWFGKEIDILGDIVDNNKITGAQFVDTSWSSTTGNFSITNTGVTTGMSLNSSTITNTTFNLSASGEIIGNYSIADSTTSNIPIKSSGKSIEDNSGIKSSGSKQSYINGSWSGYDDSLNLSSSVSNKEVSNISPSYLEYKILNTSGNNLMDTKVSSDGVYLSDISNSIKYTSKGISANKTLSIESPAISSKGIYNNTSSASANLTIDDSGIIHRVSSSEKYKKNISPIDDIIDKGKALLTITPKKWQDKNNDKDTQVGLIAEDLEKVGLSDFLFYKDGKPEGIQYDRLFILLMPLIKNILEENNG
Physico‐chemical
properties
protein length:1169 AA
molecular weight: 126975,39400 Da
isoelectric point:4,67219
aromaticity:0,08041
hydropathy:-0,38050

Domains

View on InterPro
Domain architecture
YP_009844292.1
1 1169 aa
CHP 1081–1169
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Lactobacillus phage SAC12B [NCBI] · taxon 2510941
Uroviricota Caudoviricetes Herelleviridae Tybeckvirus SAC12B
Host
Lactobacillus brevis [NCBI] · taxon 1580
cellular organisms Bacteria Bacillati Bacillota Bacilli Lactobacillales

Coding sequence (CDS)

Genbank protein accession
YP_009844292.1 [NCBI]
Genbank nucleotide accession
NC_048754.1 [NCBI]
CDS location
range 84829 -> 88338
strand +
CDS
ATGGCTAAGCAAAAGGGGGATATCCGTAGACAAGCCTCTTTAGGAACAGAATTAAAAAGAAATATAAACAATAATAATTCAACTTCTGATCTAGTATTAGCTAGAGTTTCTAAGGTAGACTATGAGAATAATAGTATTGAATATATTGTACAAACAAATGGTATGAATAACAGCTCGGGAGCTATATCCAATGGAGGCGCCAGACTTCCTGTTTCCTTTGGTGGTAAAAATGGCTATGGAAATCCTTATGGATCAGTTAATACGATTAGGGTTAATGATATTGTCTTAATTGGCTTTGTTGGGGGTAAAAAGAATTCCCCTATTGTAATAAGCAAATATTTGTCTGACGAAGATGCCTATATGCTATCCGATTATTCAGGGGACCAATATATGGCTCCTAATGATGAAGATATGTATGATAAAACTAATTCATATAGAGATTTATATCCTGATTTAACTTACTCCTATCATAATGGTAATGGATATTATGAGCATACTTTTAGTGGAAATAGCTTCCTAGTAATGGATGATTATGATATTAAGGGCAATTTTGTAGACTATCCAGTAGGCGAGGTTGATGCTTCTACTTACTACTCATTACGGGGAAATAAATATAAAGATGGAACAAACTTTGACACTTTAAATTATCTAGCTCCAAACATATTTTTTAAACATCAAGGAAGCTATCTATTAGATGATAACGGAGAAGAAAAACTAGATCATCATCAAACAAATGTTTCTATATCACCCCAAGGAACGACTAGACTAACTACTTTTCATGATGATGATAAATGGCTATCGTTGTTTTCTATAGATGGAGATAATGGGGAAATAAGTCTTACTAGAGAAAATGATAACTCTATCAATATTGGGGATACTTCTGATAGTAATGCCACATTTACAATTGATAAAGACAATAATTTAATATTATCATCAGGTAATACAAAAATGACGCTTTCTGACGGTCATCATATTATTGCTAGCGACTTAGATACTGATTCAGATAAAATAGATCTTTATCAATCGGCTTTAAATAACAAGAATTCAATATCTGGTATAAACAATAGTATAAACTCTATTAATAATAATATGTCTTCTAGTTCCAGCTCATTATCTACTGTGAATGACCAAGTGAATATGTCAGCATCTTCTATTTCTCAAACAAATGCTATAGCTAGTTCAATTTACGGGAATGCAACTACTTCTGTAAATATGTTTTCTTTAGCAAGTTCTATTGCGAATACTGAAATAGATAGTAATACTGGATTCTACAAGGAAAATAATGGTAGCTTATCAACTCCCAAAATGGCGGCAATAAGAAACTTTAATTATATATTAACGGCTTACTCTGTTACTAGTCCAATTACTATAAAGATAGCCTTTTATGACTTAAATAAAAACTTTATAAATGAAAAAGAAGTTACAGGTAATTCAGGAGATATCTCTGTAACCGCGATTTCACCAGATAATGCTGTATATATTTCTGCAAGTGTAAGTAGTAACGCCTTTAAAGTAAAATTAGAGCAAGCAGATAAGGTTACTAGTTGGTCTCCATCAATTGTCGATTTATATACAAATAATAATACGGTATTAGAACTATTAAGTGCGGCTAAAATAGCACAAGCAGATACTAATGCCAAAATGTCTACGGTAACTAGCAACAATTATTTAAATAGTCTATTACAGTATAATAATGATTCACAAATATTAGCCAGTGATAAAGATTCTTTAGCTAATTCTTGGGACTTATTCAAAGCAGATTATAAAGTAGTAGTATCCTATGCTACTAAATACTCAGTAGACTTAACAACTGCCAATAGCTACTATACCCCTTTGGAAAATTCTATTGAAAAAGATATTCTGGTTGATAGAACGTCTAATAGCCCAGCAGGAGCTTATACAAGCAATATTAAAGGCCTTCAATCTGCACTTGATAAAGTTATACCTAATATAATTTCATCAGCCCTGAATAGTGTCATAACAGCTCAGAATACGCTTGCTACAAATACTAGCAGTTATAGAAATCTATTACTAGGAACCACTACAAATATTTCTGCAACTGGAGATCAGAAATTATACTCCTTATCAAACGGAGCTAGTCAAATATCTGGAAGTACTATACTATCTTTTACTTTTAATACTACTGATGTTAATAGCAATTTTTCTATTAATGAGGTTATTCTAAACAATGATGGATCTATTAATAAAGAAGTTGTTTTAATTGATAATCTTCCAAACAATATGACTAATAATGTTGTTTCTAGCTTTATACAGCCTATTGTGCCTACTTTAAATCAAAAGGCGGACATTTATATAAGGTTCTCTTCTTATAGGCAACCTGTTCAAATTTCTAATATGATTATGGCAACATCAAATAATACTAAAGTAACATGGGTTGCGGCTCCTGAAGATATTTCTAGCACTACTACAGACAAACTAGCTACCTTTAAAATTACCGATGACCAAATTACTAGCGCTGTATTTGACCATCTTCTAGAACAGTCTGATGTATTTACACAAACGGCTGAAAAGGCTCAAATCGCCGTCACCCAAGGAGATGTTTCTGCGGGATTATCAATTGAAGCAGGTAAGATGGTTTGGTTTGGTAAAGAAATAGATATTTTGGGAGATATTGTTGATAACAATAAAATAACAGGAGCTCAATTTGTAGATACTTCTTGGTCTTCTACTACTGGAAACTTTAGTATTACTAATACTGGGGTAACTACTGGCATGTCGTTAAATAGTTCAACAATAACTAACACAACTTTTAACTTATCTGCATCTGGGGAAATAATTGGCAACTATAGCATAGCAGATAGTACTACTTCTAATATTCCTATTAAGTCTTCCGGTAAGTCAATAGAAGATAACTCTGGTATTAAATCTTCTGGCAGTAAACAATCATATATTAATGGATCATGGTCTGGATATGATGATAGTTTAAACTTATCAAGTTCCGTTAGCAACAAGGAAGTATCCAATATTTCTCCTAGCTATTTAGAATATAAAATACTAAATACCTCGGGCAACAATTTGATGGATACCAAAGTATCTAGTGATGGTGTATATTTAAGTGATATTAGTAATTCTATTAAATATACCAGTAAAGGGATATCTGCAAATAAGACATTATCAATAGAGTCTCCTGCTATTTCTAGCAAGGGAATATATAATAATACTTCTAGTGCTTCTGCAAACTTAACTATAGATGATTCTGGAATAATTCATAGAGTATCATCTTCTGAAAAGTATAAAAAGAATATTTCACCAATTGATGATATAATAGATAAAGGTAAAGCACTATTAACTATTACACCTAAGAAATGGCAAGATAAAAATAATGATAAAGATACCCAAGTAGGATTGATTGCCGAGGACTTAGAAAAAGTAGGATTATCTGATTTCTTATTTTATAAAGATGGTAAACCCGAAGGAATTCAATATGACCGACTATTCATTCTTTTAATGCCATTAATCAAAAATATTTTGGAGGAAAACAATGGATAA

Genome Context

Tertiary structure

YP_009844292.1
ESMFold structure
Source ESMFold
pLDDT 60.0
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation of virulent Lactobacillus brevis phages Feyereisen,M., Mahony,J., O'Sullivan,T. and van Sinderen,D. 2019-04-26 — GenBank