Phage RBP Database

Genbank accession

UPO38810.1 [GenBank]

Protein name

tail fibers protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,88

TF

Evidence RBPdetect2

Probability 0,81

Protein sequence

MALSVQRATSDGTMTNIVLSIKFFDTRDIFVTLDETPAIEGTDYTWQGRTQINFINAPLADGVEVTLTRRTNRTALRHIFSEGAEFTRANLDDAHTQLLYLSQEMTEGSGISDFYGDLDMHRYRVRNMAQGTENRDAVTFLQLKEVADRVTAIENIKGTNRRGPITISTQSPDTVPVQYEEWVMIGDVDNGAFVNSSNDKDQE

Physico‐chemical properties

protein length:	203 AA
molecular weight:	22821,01740 Da
isoelectric point:	4,65423
aromaticity:	0,07882
hydropathy:	-0,47340

Domain architecture

UPO38810.1

1 203 aa

ATT 4–108 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604

UPO38810.1

1203 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1609
STR

DC_1609

UPO38810.1

1203 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	4	108	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits

Proteins with similar domain architecture

Phage

Vibrio phage vB_VpaP_GHSM17 [NCBI] · taxon 2911515

Uroviricota Caudoviricetes Autographivirales Maculvirus Maculvirus GHSM17

Host

Vibrio parahaemolyticus [NCBI] · taxon 670

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

UPO38810.1 [NCBI]

Genbank nucleotide accession

OM362522.1 [NCBI]

CDS location

range 7639 -> 8250
strand -

CDS

ATGGCATTAAGTGTACAACGTGCTACGAGCGACGGTACTATGACCAACATCGTCCTCAGCATTAAATTCTTTGACACACGTGACATTTTCGTCACGCTTGATGAGACTCCTGCAATCGAGGGTACTGATTACACTTGGCAGGGTCGGACACAGATTAACTTTATTAACGCCCCGTTAGCTGATGGGGTGGAGGTTACGCTTACACGGCGTACCAACCGCACTGCGCTGCGTCATATCTTCTCTGAGGGTGCTGAATTCACCCGAGCTAACTTAGACGACGCGCATACGCAATTGCTGTACCTGAGTCAAGAAATGACCGAGGGTTCTGGCATTAGCGATTTCTATGGTGACTTGGATATGCACCGCTACCGAGTGCGCAACATGGCGCAAGGTACGGAGAACCGAGACGCTGTAACGTTCCTCCAATTGAAAGAGGTTGCAGACCGTGTAACCGCGATTGAGAACATTAAGGGTACGAACCGTCGAGGCCCAATCACTATCTCCACACAGTCCCCTGATACCGTTCCGGTTCAGTACGAGGAATGGGTGATGATTGGTGATGTGGATAATGGCGCGTTCGTTAACTCATCTAACGATAAAGACCAAGAGTAG

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)