Protein

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Genbank accession
UPO38810.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MALSVQRATSDGTMTNIVLSIKFFDTRDIFVTLDETPAIEGTDYTWQGRTQINFINAPLADGVEVTLTRRTNRTALRHIFSEGAEFTRANLDDAHTQLLYLSQEMTEGSGISDFYGDLDMHRYRVRNMAQGTENRDAVTFLQLKEVADRVTAIENIKGTNRRGPITISTQSPDTVPVQYEEWVMIGDVDNGAFVNSSNDKDQE
Physico‐chemical
properties
protein length:203 AA
molecular weight: 22821,01740 Da
isoelectric point:4,65423
aromaticity:0,07882
hydropathy:-0,47340

Domains

Domains [InterPro]
DC_1609
STR
1–202
DC_1609
IPR005604
ATT
4–108
IPR005604
UPO38810.1
1 203
Architecture
ATT
STR
ATT 1-108 | STR 109-202 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaP_GHSM17
[NCBI] 		2911515 Uroviricota > Caudoviricetes > Autographivirales > Maculvirus > Maculvirus GHSM17
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPO38810.1 [NCBI]
Genbank nucleotide accession
OM362522.1 [NCBI]
CDS location
range 7639 -> 8250
strand -
CDS
ATGGCATTAAGTGTACAACGTGCTACGAGCGACGGTACTATGACCAACATCGTCCTCAGCATTAAATTCTTTGACACACGTGACATTTTCGTCACGCTTGATGAGACTCCTGCAATCGAGGGTACTGATTACACTTGGCAGGGTCGGACACAGATTAACTTTATTAACGCCCCGTTAGCTGATGGGGTGGAGGTTACGCTTACACGGCGTACCAACCGCACTGCGCTGCGTCATATCTTCTCTGAGGGTGCTGAATTCACCCGAGCTAACTTAGACGACGCGCATACGCAATTGCTGTACCTGAGTCAAGAAATGACCGAGGGTTCTGGCATTAGCGATTTCTATGGTGACTTGGATATGCACCGCTACCGAGTGCGCAACATGGCGCAAGGTACGGAGAACCGAGACGCTGTAACGTTCCTCCAATTGAAAGAGGTTGCAGACCGTGTAACCGCGATTGAGAACATTAAGGGTACGAACCGTCGAGGCCCAATCACTATCTCCACACAGTCCCCTGATACCGTTCCGGTTCAGTACGAGGAATGGGTGATGATTGGTGATGTGGATAATGGCGCGTTCGTTAACTCATCTAACGATAAAGACCAAGAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9dcde3afbc01481fcfb001ad64adefed3f7b92f7ecf1b04700e2798af6f3decc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8104
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50