Phage RBP Database

Genbank accession

UPO38810.1 [GenBank]

Protein name

tail fibers protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,88

TF

Evidence RBPdetect2

Probability 0,81

Seq2Symm

C3 confidence 0,990

C3	0,990
C1	0,006
D3	0,004

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MALSVQRATSDGTMTNIVLSIKFFDTRDIFVTLDETPAIEGTDYTWQGRTQINFINAPLADGVEVTLTRRTNRTALRHIFSEGAEFTRANLDDAHTQLLYLSQEMTEGSGISDFYGDLDMHRYRVRNMAQGTENRDAVTFLQLKEVADRVTAIENIKGTNRRGPITISTQSPDTVPVQYEEWVMIGDVDNGAFVNSSNDKDQE

Physico‐chemical properties

protein length:	203 AA
molecular weight:	22821,01740 Da
isoelectric point:	4,65423
aromaticity:	0,07882
hydropathy:	-0,47340

Domain architecture

UPO38810.1

1 203 aa

ATT 4–108 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604

UPO38810.1

1203 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1609
STR

DC_1609

UPO38810.1

1203 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	4	108	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits

Proteins with similar domain architecture

Phage

Vibrio phage vB_VpaP_GHSM17 [NCBI] · taxon 2911515

Uroviricota Caudoviricetes Autographivirales Maculvirus Maculvirus GHSM17

Host

Vibrio parahaemolyticus [NCBI] · taxon 670

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

UPO38810.1 [NCBI]

Genbank nucleotide accession

OM362522.1 [NCBI]

CDS location

range 7639 -> 8250
strand -

CDS

ATGGCATTAAGTGTACAACGTGCTACGAGCGACGGTACTATGACCAACATCGTCCTCAGCATTAAATTCTTTGACACACGTGACATTTTCGTCACGCTTGATGAGACTCCTGCAATCGAGGGTACTGATTACACTTGGCAGGGTCGGACACAGATTAACTTTATTAACGCCCCGTTAGCTGATGGGGTGGAGGTTACGCTTACACGGCGTACCAACCGCACTGCGCTGCGTCATATCTTCTCTGAGGGTGCTGAATTCACCCGAGCTAACTTAGACGACGCGCATACGCAATTGCTGTACCTGAGTCAAGAAATGACCGAGGGTTCTGGCATTAGCGATTTCTATGGTGACTTGGATATGCACCGCTACCGAGTGCGCAACATGGCGCAAGGTACGGAGAACCGAGACGCTGTAACGTTCCTCCAATTGAAAGAGGTTGCAGACCGTGTAACCGCGATTGAGAACATTAAGGGTACGAACCGTCGAGGCCCAATCACTATCTCCACACAGTCCCCTGATACCGTTCCGGTTCAGTACGAGGAATGGGTGATGATTGGTGATGTGGATAATGGCGCGTTCGTTAACTCATCTAACGATAAAGACCAAGAGTAG

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)