Protein

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Genbank accession
QDJ96413.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,75
Seq2Symm
C1 confidence 0,399
C1 0,399
C3 0,218
I 0,031
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSNPSFRYQVYYTDEDKTPIVVPRSSVVTTAGDIVFIGKNRLEYGEVFNTNIVHLLEHFAAREDADKPNTPDLSQVYVPQLSKPTVGQIWYNKTTNTPHAWNGAVWMALAQNDTVAGNSGVIAHGQQLPRPVSSIDGYVYPYSECSWVVSPFGFAEPQRIIFLSCYTDSNARVFTQYRRAGSPTLFNGLANYQIIGIRDTRNHGVPFPTPNIPGLTPTPTFTPTLTPTKTPSVTGSPTPTLTRTPGQTRSATPTPTVTRSGTPVPSQTRSVTPTPTPTPTITPTITPSRPAPITVDLSNQTVARTTGVGSTLKVGYSILNTQLVVVYDSNGFNIPTRWLINDDPANYSVRATRVSGNVTPTGFLDTWLNCSINRTWEIQNSSTSPGTYTLTLNVQVRRDADNFVMGNGVIVLQVTVQ
Physico‐chemical
properties
protein length:417 AA
molecular weight: 45512,53160 Da
isoelectric point:9,06214
aromaticity:0,08873
hydropathy:-0,29185

Domains

View on InterPro

No domain architecture available.

Taxonomy

Phage
Xanthomonas phage Xoo-sp13 [NCBI] · taxon 2591401
No lineage information
Host
Xanthomonas oryzae pv. oryzae [NCBI] · taxon 64187
Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Xanthomonas Xanthomonas oryzae

Coding sequence (CDS)

Genbank protein accession
QDJ96413.1 [NCBI]
Genbank nucleotide accession
MN047793.1 [NCBI]
CDS location
range 138893 -> 140146
strand -
CDS
ATGAGTAATCCGAGCTTTCGCTACCAAGTTTATTACACAGACGAAGATAAAACCCCAATCGTCGTGCCCCGGTCATCGGTAGTTACCACTGCCGGTGATATCGTGTTTATTGGTAAAAACCGCCTGGAGTATGGTGAAGTATTCAATACTAACATCGTTCATCTGCTTGAGCACTTTGCTGCACGAGAAGACGCAGATAAGCCTAATACTCCAGATTTGTCCCAAGTGTATGTACCACAATTGTCTAAGCCGACGGTAGGTCAGATTTGGTATAATAAAACTACGAACACTCCACATGCATGGAATGGTGCTGTATGGATGGCTCTTGCACAGAATGACACAGTAGCTGGGAATTCTGGTGTTATTGCTCACGGTCAACAATTACCACGACCAGTAAGTTCTATTGACGGTTACGTGTACCCATATTCTGAATGTTCGTGGGTAGTTTCCCCATTCGGATTTGCCGAACCTCAACGCATTATATTTCTTTCATGTTATACCGATTCTAATGCTAGGGTATTCACTCAATATAGACGTGCTGGAAGTCCAACACTCTTTAACGGCTTAGCCAATTATCAGATTATTGGAATTAGAGACACCCGTAATCATGGCGTTCCGTTCCCGACCCCAAATATTCCGGGATTAACCCCAACGCCTACGTTTACTCCAACGTTGACCCCAACAAAGACGCCATCGGTTACAGGGTCCCCAACACCCACACTAACGAGGACACCCGGACAGACCCGTAGTGCCACACCAACACCAACGGTAACCCGTAGTGGGACACCTGTGCCGTCACAGACCCGATCAGTAACACCGACACCGACCCCAACACCAACGATCACCCCAACCATTACACCAAGTCGTCCAGCACCTATTACAGTTGATTTAAGTAATCAAACTGTGGCACGTACCACGGGGGTAGGGTCTACTCTCAAGGTAGGATATTCTATTTTAAATACTCAGCTTGTGGTAGTATACGATTCGAATGGGTTTAACATTCCTACCCGATGGTTGATCAATGATGACCCGGCAAATTATTCAGTTAGAGCGACCCGCGTATCAGGTAATGTAACTCCTACAGGGTTTTTGGATACATGGCTAAATTGTTCAATCAATAGAACGTGGGAGATTCAAAACTCTTCAACGTCCCCAGGAACGTATACATTAACCCTTAATGTACAAGTGCGACGCGACGCGGATAATTTCGTTATGGGTAACGGTGTGATTGTGTTACAAGTAACCGTTCAGTAA

Genome Context

Tertiary structure

QDJ96413.1
ESMFold structure
Source ESMFold
pLDDT 54.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Characterization and genome sequence analysis of a novel phage Xoo-sp13 that infects Xanthomonas oryzae pv. oryzae Nazir,A., Dong,Z., Liu,J., Tong,Y. and Peng,D. 2021-02-14 — GenBank