Protein

View in Explore
Genbank accession
AGN12249.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSRIDFPANPNVGQDYTYNNSVWRWDGYVWRRIPDPGAPGPTGPAGAPGLTGPAGPDGPSGPPGPPGPAGGPPGPTGPAGDDGAPGPQGPPGIGGPTGPQGPAGSPGPTGPVGPSNPGPTGPTGPTGPTGPDGPTGPPGPGNTGTIDSVKQYRTPGVERSCESPIFVVNNNTIGIGSTSNAFGNRFAQNDDPTTANGGSWTVCDGDLWYDMDSGAGGGPGPAGPPGPSGPAGPPGPAGPPGSGGGANVETSDTAPSNPSDGDLWWDSINGRLNVYYQDADSSQWVSSNGVGVGSTGPAGPTGPTGPTGPTGSAGIGSTSIISQGDSFVQVLDGSNASGIGSIAFETQGTRRWHVTNQGHIIPALNCSYDLGNAEQKVRHLFLCDNSLKFVGADDVERAVGITNGNLTFMGSQLLTVSLTTPSEGEVLEYNGTVWANKAKTPVAGLFQTKNWNMPF
Physico‐chemical
properties
protein length:455 AA
molecular weight: 45213,55560 Da
isoelectric point:4,30381
aromaticity:0,06813
hydropathy:-0,53077

Domains

View on InterPro
Domain architecture
AGN12249.1
1 455 aa
STR 214–285 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Prochlorococcus phage P-SSM5 [NCBI] · taxon 536454
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host No host information

Coding sequence (CDS)

Genbank protein accession
AGN12249.1 [NCBI]
Genbank nucleotide accession
HQ632825.1 [NCBI]
CDS location
range 64840 -> 66207
strand -
CDS
ATGTCAAGAATTGATTTTCCAGCTAATCCTAATGTAGGTCAAGATTATACCTACAATAATTCCGTTTGGAGATGGGATGGATACGTTTGGAGAAGAATTCCCGATCCAGGTGCTCCAGGTCCAACTGGTCCTGCTGGTGCTCCAGGTTTAACTGGACCTGCTGGTCCTGATGGTCCAAGTGGTCCTCCTGGTCCTCCTGGTCCTGCTGGTGGTCCTCCAGGTCCAACTGGTCCTGCTGGTGATGATGGTGCTCCTGGTCCTCAAGGTCCTCCAGGTATCGGTGGTCCAACTGGTCCTCAAGGTCCTGCTGGTTCTCCAGGTCCAACTGGTCCTGTAGGTCCTTCAAATCCAGGTCCAACTGGTCCCACAGGTCCCACAGGTCCAACTGGACCAGATGGTCCTACAGGTCCACCAGGTCCAGGTAATACAGGAACGATTGATAGTGTAAAGCAATATAGAACTCCTGGTGTAGAGAGAAGTTGTGAAAGTCCGATCTTTGTAGTTAATAACAATACAATTGGTATTGGATCGACAAGTAACGCTTTCGGAAATAGATTTGCTCAGAATGATGATCCTACTACTGCTAATGGTGGTAGTTGGACTGTATGTGATGGAGATTTATGGTATGATATGGACTCTGGTGCTGGTGGTGGACCTGGTCCTGCTGGTCCTCCAGGTCCATCTGGTCCAGCAGGTCCTCCAGGTCCAGCAGGTCCTCCTGGATCTGGTGGTGGTGCAAATGTAGAAACATCTGATACTGCACCAAGTAATCCTAGTGATGGTGATCTCTGGTGGGATTCTATTAATGGACGATTAAATGTTTATTACCAAGATGCTGATAGTTCACAGTGGGTTAGTTCTAATGGTGTAGGTGTTGGATCAACAGGTCCAGCAGGTCCTACAGGTCCTACAGGTCCAACTGGTCCGACTGGTTCTGCTGGTATTGGATCTACATCTATAATATCTCAGGGTGATAGTTTCGTTCAAGTACTTGATGGTAGTAATGCCTCTGGTATTGGATCAATTGCATTTGAAACACAAGGAACTAGAAGATGGCACGTTACTAATCAAGGACATATAATTCCTGCATTAAATTGTAGTTATGATCTTGGTAATGCAGAACAAAAAGTAAGACATCTATTCTTATGTGACAATAGTTTAAAGTTTGTAGGTGCGGATGATGTTGAACGGGCAGTTGGTATTACTAATGGTAATTTAACCTTTATGGGTTCTCAATTACTAACAGTTAGTCTTACAACTCCTTCCGAAGGTGAAGTTTTAGAGTATAATGGAACAGTATGGGCAAACAAGGCTAAAACTCCAGTTGCTGGATTATTCCAAACAAAAAATTGGAATATGCCTTTCTAA

Genome Context

Tertiary structure

AGN12249.1
ESMFold structure
Source ESMFold
pLDDT 64.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSM5 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank