Protein

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Genbank accession
AGN12249.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,72
TF
Evidence Phold
Probability 1,00
Protein sequence
MSRIDFPANPNVGQDYTYNNSVWRWDGYVWRRIPDPGAPGPTGPAGAPGLTGPAGPDGPSGPPGPPGPAGGPPGPTGPAGDDGAPGPQGPPGIGGPTGPQGPAGSPGPTGPVGPSNPGPTGPTGPTGPTGPDGPTGPPGPGNTGTIDSVKQYRTPGVERSCESPIFVVNNNTIGIGSTSNAFGNRFAQNDDPTTANGGSWTVCDGDLWYDMDSGAGGGPGPAGPPGPSGPAGPPGPAGPPGSGGGANVETSDTAPSNPSDGDLWWDSINGRLNVYYQDADSSQWVSSNGVGVGSTGPAGPTGPTGPTGPTGSAGIGSTSIISQGDSFVQVLDGSNASGIGSIAFETQGTRRWHVTNQGHIIPALNCSYDLGNAEQKVRHLFLCDNSLKFVGADDVERAVGITNGNLTFMGSQLLTVSLTTPSEGEVLEYNGTVWANKAKTPVAGLFQTKNWNMPF
Physico‐chemical
properties
protein length:455 AA
molecular weight: 45213,55560 Da
isoelectric point:4,30381
aromaticity:0,06813
hydropathy:-0,53077

Domains

Domains [InterPro]
IPR050149
36–314
IPR050149
G3DSA:1.20.5.320
214–285
G3DSA:1.20.5.320
AGN12249.1
1 455
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM5
[NCBI] 		536454 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGN12249.1 [NCBI]
Genbank nucleotide accession
HQ632825 [NCBI]
CDS location
range 64840 -> 66207
strand -
CDS
ATGTCAAGAATTGATTTTCCAGCTAATCCTAATGTAGGTCAAGATTATACCTACAATAATTCCGTTTGGAGATGGGATGGATACGTTTGGAGAAGAATTCCCGATCCAGGTGCTCCAGGTCCAACTGGTCCTGCTGGTGCTCCAGGTTTAACTGGACCTGCTGGTCCTGATGGTCCAAGTGGTCCTCCTGGTCCTCCTGGTCCTGCTGGTGGTCCTCCAGGTCCAACTGGTCCTGCTGGTGATGATGGTGCTCCTGGTCCTCAAGGTCCTCCAGGTATCGGTGGTCCAACTGGTCCTCAAGGTCCTGCTGGTTCTCCAGGTCCAACTGGTCCTGTAGGTCCTTCAAATCCAGGTCCAACTGGTCCCACAGGTCCCACAGGTCCAACTGGACCAGATGGTCCTACAGGTCCACCAGGTCCAGGTAATACAGGAACGATTGATAGTGTAAAGCAATATAGAACTCCTGGTGTAGAGAGAAGTTGTGAAAGTCCGATCTTTGTAGTTAATAACAATACAATTGGTATTGGATCGACAAGTAACGCTTTCGGAAATAGATTTGCTCAGAATGATGATCCTACTACTGCTAATGGTGGTAGTTGGACTGTATGTGATGGAGATTTATGGTATGATATGGACTCTGGTGCTGGTGGTGGACCTGGTCCTGCTGGTCCTCCAGGTCCATCTGGTCCAGCAGGTCCTCCAGGTCCAGCAGGTCCTCCTGGATCTGGTGGTGGTGCAAATGTAGAAACATCTGATACTGCACCAAGTAATCCTAGTGATGGTGATCTCTGGTGGGATTCTATTAATGGACGATTAAATGTTTATTACCAAGATGCTGATAGTTCACAGTGGGTTAGTTCTAATGGTGTAGGTGTTGGATCAACAGGTCCAGCAGGTCCTACAGGTCCTACAGGTCCAACTGGTCCGACTGGTTCTGCTGGTATTGGATCTACATCTATAATATCTCAGGGTGATAGTTTCGTTCAAGTACTTGATGGTAGTAATGCCTCTGGTATTGGATCAATTGCATTTGAAACACAAGGAACTAGAAGATGGCACGTTACTAATCAAGGACATATAATTCCTGCATTAAATTGTAGTTATGATCTTGGTAATGCAGAACAAAAAGTAAGACATCTATTCTTATGTGACAATAGTTTAAAGTTTGTAGGTGCGGATGATGTTGAACGGGCAGTTGGTATTACTAATGGTAATTTAACCTTTATGGGTTCTCAATTACTAACAGTTAGTCTTACAACTCCTTCCGAAGGTGAAGTTTTAGAGTATAATGGAACAGTATGGGCAAACAAGGCTAAAACTCCAGTTGCTGGATTATTCCAAACAAAAAATTGGAATATGCCTTTCTAA

Tertiary structure

PDB ID
57d7b83017022a1c2f9ee2d4ef7d3cca73421fcddb2b543fec2c38615d18ef66
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6425
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSM5 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank