Protein

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Genbank accession
WDR22580.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MIRTSNTCCGNEAGLVEKFIGTAYDVVKTVYENLGELQFIYDFLNKYGVLITVDSIDELKALSTSAKYTRVYTFSATAGYGYTDYLYVDGNTTGVIPNDPTATGSWIVVASSTGGGSGTSEGGYISWVYAQGSALGGETTIAVPNGTIGVPFIIVEGYMNTVGYGFTFDVGTLTVTLAQPLEAGDEVVLLLSGTPAVPDNPNISDWVVFNWLYNGGAAVGGEQVINIPYTFQSVPAIFKNGLRYHPGLSTQSYTIDAANQRILLTEPLVTNDRLVVQVGGESVTVVMTDRTIQEVARAANVKDEQVILSTNITSFLNGKTVIFDEVAQHIYGLPTLPNNVYISTVSNGQLTYNPGSVTVDLVPVPNPQIEAFKANTGAGLVGTLSGNSVQKELPTKMSAYTTLQEVATNAVNEIIIDEDYTFTDGESVDFGGKVLTINCKAKFIGDGILNWNNLGSGSTIVSPHMHTKTTPYTVFRFDSNGDWVTDPATVLASVTQRLDKGYKPNVNDHDIWSSLPDSIKNQVAGATLRVNSADNIRVSHPEATMGGYLFTLCNHILVESPRNFIAWESGITFENHHTTEWGTGNKVVGGEIKYGSGSAVVFIRNDGGDDHDGGVENLISYRVGESGVKTYQNEVGGRSARNYRLKFDNITTIQCYYDGIDVNADTGSPVERVDDYTLAEYPWFHLPTQHIIRNIITRDCMGIGAWWDGQMNIIDNVITYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVMIHAYTTQGYAVYAPSSEISNVACAGSGTKLILCTYVGDIQGGNINVQHGDNTMTLAMRPAMGGTTNPSLLMTADCQVATPGGEASIVKLSAIQDGVRVGEMQLNRLGFKHMSIPVASTQLPESALEYNSSVGFFFGSDGVLRLLAKKPDGTFVTYTMS
Physico‐chemical
properties
protein length:924 AA
molecular weight: 99487,27730 Da
isoelectric point:4,76268
aromaticity:0,08983
hydropathy:-0,08409

Domains

Domains [InterPro]
DC_0041
STR
45–205
DC_0041 G3DSA:3.30.2020.50 IPR012332
G3DSA:3.30.2020.50
ATT
280–366
G3DSA:3.30.2020.50 IPR011050
IPR015331
RBD
395–922
IPR015331
IPR012332
STR
395–923
IPR012332
WDR22580.1
1 924
Architecture
STR
ATT
STR
STR 45-205 | ATT 277-366 | STR 389-923 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDR22580.1
1 924
Domain Start End Length (AA) Confidence
N-terminal 1 396 396 0,9920
Central domain 397 811 416 0,9866
C-terminal 812 924 112 0,8659
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-396
Central
397-811
C-terminal
812-924

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenP_UTK0002
[NCBI] 		3028911 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDR22580.1 [NCBI]
Genbank nucleotide accession
OQ359892.1 [NCBI]
CDS location
range 59180 -> 61954
strand -
CDS
ATGATTCGAACTTCGAATACATGCTGCGGAAATGAAGCTGGTCTGGTGGAGAAATTCATTGGTACAGCTTATGACGTAGTTAAAACTGTTTATGAAAATCTTGGTGAACTTCAGTTCATTTATGATTTCTTAAATAAGTATGGTGTGTTGATTACAGTTGATTCAATTGATGAACTGAAAGCACTCTCTACATCTGCTAAATACACTCGCGTATACACATTCTCTGCTACCGCTGGATATGGATACACAGACTATTTGTATGTAGATGGTAATACTACAGGTGTTATCCCTAATGACCCTACTGCTACAGGCTCTTGGATTGTTGTAGCCAGTTCTACTGGAGGTGGTAGTGGTACATCTGAAGGTGGATATATCTCTTGGGTATATGCACAAGGTTCTGCATTGGGTGGGGAAACTACTATTGCAGTACCTAATGGTACTATTGGTGTTCCTTTCATTATTGTTGAAGGGTACATGAATACAGTTGGGTATGGATTCACTTTTGATGTAGGAACATTAACTGTGACTTTAGCTCAACCATTAGAAGCAGGTGATGAAGTAGTTCTTTTACTTTCTGGTACTCCTGCTGTTCCAGATAATCCAAATATTTCAGATTGGGTTGTATTTAACTGGTTATACAATGGTGGGGCTGCTGTTGGGGGTGAACAGGTAATTAATATTCCTTACACCTTCCAATCTGTTCCAGCCATCTTTAAGAATGGGTTGAGATATCATCCTGGATTGAGTACTCAGTCATATACTATTGATGCAGCTAACCAACGAATCTTACTAACTGAACCATTAGTTACTAATGACCGTTTAGTAGTTCAGGTTGGTGGTGAATCTGTTACTGTAGTTATGACTGACCGTACTATTCAAGAAGTAGCACGAGCAGCTAATGTAAAAGATGAACAGGTAATTTTAAGTACCAATATTACTTCATTTTTAAATGGTAAGACTGTTATTTTTGATGAAGTAGCCCAACACATTTATGGATTACCTACCTTACCTAACAACGTTTATATCTCTACTGTTAGTAATGGTCAGCTAACGTATAATCCAGGTAGTGTTACAGTTGATTTAGTACCAGTACCCAATCCTCAGATTGAGGCTTTTAAAGCTAACACTGGTGCAGGTTTGGTTGGTACTTTGTCTGGTAATTCTGTCCAAAAGGAACTGCCTACTAAAATGTCTGCATATACTACTTTGCAAGAAGTAGCTACTAATGCTGTAAATGAAATTATCATTGATGAGGATTATACATTCACAGATGGTGAGTCTGTGGATTTCGGTGGTAAGGTCTTAACCATTAACTGTAAGGCTAAGTTTATTGGGGATGGTATACTCAACTGGAATAACTTAGGTAGTGGTTCTACTATAGTTTCCCCACACATGCATACTAAAACTACACCCTATACCGTATTTCGCTTTGATAGTAATGGGGATTGGGTAACAGACCCAGCTACCGTATTAGCCTCCGTTACCCAGAGACTGGATAAGGGTTATAAGCCTAATGTTAATGACCATGACATTTGGTCATCTCTTCCTGATTCTATTAAGAACCAGGTTGCTGGGGCAACTCTACGTGTAAACTCTGCTGATAATATTCGTGTGTCTCACCCGGAAGCTACTATGGGTGGGTATCTATTTACATTGTGTAATCATATTCTGGTTGAGTCTCCTAGAAACTTTATTGCATGGGAATCTGGTATTACCTTCGAGAACCACCACACTACAGAATGGGGAACTGGTAACAAGGTTGTAGGTGGTGAGATTAAGTACGGTTCTGGTTCTGCTGTTGTGTTCATCCGAAATGACGGTGGCGATGACCATGATGGTGGTGTAGAGAATCTTATTTCTTATCGTGTTGGTGAGTCCGGTGTTAAGACATACCAGAATGAGGTTGGTGGCAGGTCTGCCCGTAACTACCGACTTAAGTTCGATAACATCACTACAATTCAGTGTTACTACGATGGTATTGATGTTAATGCTGACACAGGTTCTCCTGTTGAGCGAGTGGACGACTATACTCTGGCAGAGTATCCATGGTTCCACTTGCCTACACAGCATATCATTAGGAACATCATCACCCGTGACTGTATGGGCATTGGTGCATGGTGGGATGGTCAAATGAATATTATTGATAATGTTATTACCTATGAAGCTCATAAAGAGGGTATTTTTGATAGAGGCACTAATAATGATATTACTAATGTAACAGTTATAGGTGCAAACAAAGATTTAACTAACCTAAATCAGCTTACATGTGAAGGTGGAAGCAGATTGCGCGGAGTGATGATTCATGCATACACCACACAAGGATATGCTGTTTATGCACCATCATCTGAAATTAGTAATGTAGCGTGTGCAGGGTCTGGCACTAAACTTATACTTTGTACGTATGTTGGTGATATTCAGGGTGGGAACATAAACGTACAGCATGGTGATAACACCATGACCCTGGCTATGCGTCCAGCAATGGGGGGAACAACAAACCCATCTTTGCTTATGACAGCAGATTGCCAAGTGGCAACTCCAGGAGGTGAGGCTAGTATTGTTAAACTATCCGCTATCCAGGATGGTGTACGAGTAGGTGAGATGCAGTTAAACAGACTGGGCTTCAAGCATATGAGTATTCCGGTTGCATCTACTCAATTACCAGAGAGTGCCTTAGAGTATAACTCTTCTGTAGGGTTCTTCTTTGGTAGTGATGGTGTACTGAGACTACTTGCTAAGAAACCTGATGGTACGTTTGTAACGTACACCATGAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d4c7c5b073ca705f001ac875d351af174e10d84449a398be77baa882929e5c22
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6426
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater Bryan,D.W., Hudson,L.K., Wang,J. and Denes,T.G. — — GenBank