Protein

View in Explore
Genbank accession
WDR22580.1 [GenBank]
Protein name
tail fibers protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MIRTSNTCCGNEAGLVEKFIGTAYDVVKTVYENLGELQFIYDFLNKYGVLITVDSIDELKALSTSAKYTRVYTFSATAGYGYTDYLYVDGNTTGVIPNDPTATGSWIVVASSTGGGSGTSEGGYISWVYAQGSALGGETTIAVPNGTIGVPFIIVEGYMNTVGYGFTFDVGTLTVTLAQPLEAGDEVVLLLSGTPAVPDNPNISDWVVFNWLYNGGAAVGGEQVINIPYTFQSVPAIFKNGLRYHPGLSTQSYTIDAANQRILLTEPLVTNDRLVVQVGGESVTVVMTDRTIQEVARAANVKDEQVILSTNITSFLNGKTVIFDEVAQHIYGLPTLPNNVYISTVSNGQLTYNPGSVTVDLVPVPNPQIEAFKANTGAGLVGTLSGNSVQKELPTKMSAYTTLQEVATNAVNEIIIDEDYTFTDGESVDFGGKVLTINCKAKFIGDGILNWNNLGSGSTIVSPHMHTKTTPYTVFRFDSNGDWVTDPATVLASVTQRLDKGYKPNVNDHDIWSSLPDSIKNQVAGATLRVNSADNIRVSHPEATMGGYLFTLCNHILVESPRNFIAWESGITFENHHTTEWGTGNKVVGGEIKYGSGSAVVFIRNDGGDDHDGGVENLISYRVGESGVKTYQNEVGGRSARNYRLKFDNITTIQCYYDGIDVNADTGSPVERVDDYTLAEYPWFHLPTQHIIRNIITRDCMGIGAWWDGQMNIIDNVITYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVMIHAYTTQGYAVYAPSSEISNVACAGSGTKLILCTYVGDIQGGNINVQHGDNTMTLAMRPAMGGTTNPSLLMTADCQVATPGGEASIVKLSAIQDGVRVGEMQLNRLGFKHMSIPVASTQLPESALEYNSSVGFFFGSDGVLRLLAKKPDGTFVTYTMS
Physico‐chemical
properties
protein length:924 AA
molecular weight: 99487,27730 Da
isoelectric point:4,76268
aromaticity:0,08983
hydropathy:-0,08409

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
277–366
G3DSA:3.30.2020.50 IPR012332
IPR011050
394–922
IPR011050
IPR015331
395–922
IPR015331
WDR22580.1
1 924
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenP_UTK0002
[NCBI] 		3028911 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDR22580.1 [NCBI]
Genbank nucleotide accession
OQ359892.1 [NCBI]
CDS location
range 59180 -> 61954
strand -
CDS
ATGATTCGAACTTCGAATACATGCTGCGGAAATGAAGCTGGTCTGGTGGAGAAATTCATTGGTACAGCTTATGACGTAGTTAAAACTGTTTATGAAAATCTTGGTGAACTTCAGTTCATTTATGATTTCTTAAATAAGTATGGTGTGTTGATTACAGTTGATTCAATTGATGAACTGAAAGCACTCTCTACATCTGCTAAATACACTCGCGTATACACATTCTCTGCTACCGCTGGATATGGATACACAGACTATTTGTATGTAGATGGTAATACTACAGGTGTTATCCCTAATGACCCTACTGCTACAGGCTCTTGGATTGTTGTAGCCAGTTCTACTGGAGGTGGTAGTGGTACATCTGAAGGTGGATATATCTCTTGGGTATATGCACAAGGTTCTGCATTGGGTGGGGAAACTACTATTGCAGTACCTAATGGTACTATTGGTGTTCCTTTCATTATTGTTGAAGGGTACATGAATACAGTTGGGTATGGATTCACTTTTGATGTAGGAACATTAACTGTGACTTTAGCTCAACCATTAGAAGCAGGTGATGAAGTAGTTCTTTTACTTTCTGGTACTCCTGCTGTTCCAGATAATCCAAATATTTCAGATTGGGTTGTATTTAACTGGTTATACAATGGTGGGGCTGCTGTTGGGGGTGAACAGGTAATTAATATTCCTTACACCTTCCAATCTGTTCCAGCCATCTTTAAGAATGGGTTGAGATATCATCCTGGATTGAGTACTCAGTCATATACTATTGATGCAGCTAACCAACGAATCTTACTAACTGAACCATTAGTTACTAATGACCGTTTAGTAGTTCAGGTTGGTGGTGAATCTGTTACTGTAGTTATGACTGACCGTACTATTCAAGAAGTAGCACGAGCAGCTAATGTAAAAGATGAACAGGTAATTTTAAGTACCAATATTACTTCATTTTTAAATGGTAAGACTGTTATTTTTGATGAAGTAGCCCAACACATTTATGGATTACCTACCTTACCTAACAACGTTTATATCTCTACTGTTAGTAATGGTCAGCTAACGTATAATCCAGGTAGTGTTACAGTTGATTTAGTACCAGTACCCAATCCTCAGATTGAGGCTTTTAAAGCTAACACTGGTGCAGGTTTGGTTGGTACTTTGTCTGGTAATTCTGTCCAAAAGGAACTGCCTACTAAAATGTCTGCATATACTACTTTGCAAGAAGTAGCTACTAATGCTGTAAATGAAATTATCATTGATGAGGATTATACATTCACAGATGGTGAGTCTGTGGATTTCGGTGGTAAGGTCTTAACCATTAACTGTAAGGCTAAGTTTATTGGGGATGGTATACTCAACTGGAATAACTTAGGTAGTGGTTCTACTATAGTTTCCCCACACATGCATACTAAAACTACACCCTATACCGTATTTCGCTTTGATAGTAATGGGGATTGGGTAACAGACCCAGCTACCGTATTAGCCTCCGTTACCCAGAGACTGGATAAGGGTTATAAGCCTAATGTTAATGACCATGACATTTGGTCATCTCTTCCTGATTCTATTAAGAACCAGGTTGCTGGGGCAACTCTACGTGTAAACTCTGCTGATAATATTCGTGTGTCTCACCCGGAAGCTACTATGGGTGGGTATCTATTTACATTGTGTAATCATATTCTGGTTGAGTCTCCTAGAAACTTTATTGCATGGGAATCTGGTATTACCTTCGAGAACCACCACACTACAGAATGGGGAACTGGTAACAAGGTTGTAGGTGGTGAGATTAAGTACGGTTCTGGTTCTGCTGTTGTGTTCATCCGAAATGACGGTGGCGATGACCATGATGGTGGTGTAGAGAATCTTATTTCTTATCGTGTTGGTGAGTCCGGTGTTAAGACATACCAGAATGAGGTTGGTGGCAGGTCTGCCCGTAACTACCGACTTAAGTTCGATAACATCACTACAATTCAGTGTTACTACGATGGTATTGATGTTAATGCTGACACAGGTTCTCCTGTTGAGCGAGTGGACGACTATACTCTGGCAGAGTATCCATGGTTCCACTTGCCTACACAGCATATCATTAGGAACATCATCACCCGTGACTGTATGGGCATTGGTGCATGGTGGGATGGTCAAATGAATATTATTGATAATGTTATTACCTATGAAGCTCATAAAGAGGGTATTTTTGATAGAGGCACTAATAATGATATTACTAATGTAACAGTTATAGGTGCAAACAAAGATTTAACTAACCTAAATCAGCTTACATGTGAAGGTGGAAGCAGATTGCGCGGAGTGATGATTCATGCATACACCACACAAGGATATGCTGTTTATGCACCATCATCTGAAATTAGTAATGTAGCGTGTGCAGGGTCTGGCACTAAACTTATACTTTGTACGTATGTTGGTGATATTCAGGGTGGGAACATAAACGTACAGCATGGTGATAACACCATGACCCTGGCTATGCGTCCAGCAATGGGGGGAACAACAAACCCATCTTTGCTTATGACAGCAGATTGCCAAGTGGCAACTCCAGGAGGTGAGGCTAGTATTGTTAAACTATCCGCTATCCAGGATGGTGTACGAGTAGGTGAGATGCAGTTAAACAGACTGGGCTTCAAGCATATGAGTATTCCGGTTGCATCTACTCAATTACCAGAGAGTGCCTTAGAGTATAACTCTTCTGTAGGGTTCTTCTTTGGTAGTGATGGTGTACTGAGACTACTTGCTAAGAAACCTGATGGTACGTTTGTAACGTACACCATGAGCTAA

Tertiary structure

PDB ID
d4c7c5b073ca705f001ac875d351af174e10d84449a398be77baa882929e5c22
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6426
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater Bryan,D.W., Hudson,L.K., Wang,J. and Denes,T.G. — — GenBank