Protein

View in Explore
UniProt accession
V5UPJ8 [UniProt]
Protein name
Uncharacterized protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,88
Protein sequence
MNAHTPFDAKQDWTNPYCQNSSNDPMVDALLGNAYHVVRTVYCNLGNLKLIYDFLNKYGMVLGVQSETELKAIPTSASYVRLYGFDNTNKRVVTDYLYVEGDRTGVIPDDPSATGSWILVATSNSDSGGDDGEGKASPPYIPYSYNNGSAIGGETTIPVPAGTVGVPMIVIDGYTNLVGYGFTYDASTLTVTLAQPLEPGDEVHLFLTGTPAVPDNPNVSDWVQINWLYNGGYASGGEQVIAIPYTFESVPAIYKNGERYYAGLADKSYAVDAANQRILLTEPLATNDRLIIQIGGESTTLIMSDRTVQEVARSANVHENDVILSTNTTQYLNGMKVIYDVVGQKIYGLPTLPTNVYINSVSNGQLTYSPGNITVDLLPMPSEALSALETLENSLNSPLGFTNIGRVQSFAALRTLVPPSAGARVLLSGYYDNSDTGGGEFIARSTTGMSEVPDDDGGVIATVNSNWYWERVDTNNATVEDFGAISYTGDDTTGIADSSDAFQRMFNSLNRIFSADSSKRFVIDAPILLKVPTLKLIYQGVV
Physico‐chemical
properties
protein length:542 AA
molecular weight: 58476,42720 Da
isoelectric point:4,33229
aromaticity:0,09594
hydropathy:-0,13727

Domains

Domains [InterPro]
DC_0265
STR
1–533
DC_0265
G3DSA:3.30.2020.50
ATT
292–383
G3DSA:3.30.2020.50
V5UPJ8
1 542
Architecture
STR
ATT
STR
STR 1-291 | ATT 292-383 | STR 384-533 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
V5UPJ8
1 542
Domain Start End Length (AA) Confidence
N-terminal 1 497 497 0,9964
Central domain 498 531 35 0,9775
C-terminal 532 542 10 0,0929
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-497
Central
498-531
C-terminal
532-542

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage pSb-1
[NCBI] 		1414738 Uroviricota > Caudoviricetes > Schitoviridae > Gamaleyavirus > Gamaleyavirus Sb1
Host Shigella boydii
[NCBI] 		621 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
dba5b5649d7dc25eae2b247e67488206b0a4d638a9aae96e650c3192583b0e91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6830
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50