Phage RBP Database

Genbank accession

QDM57091.1 [GenBank]

Protein name

minor tail protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 1,00

Protein sequence

MSVVVTEDFTDIGLTSDDVTVEFSGMPIRPKSSETGLITAKPVVVRTVNGKVTSPSLDGGPARIRVSAGSWVQAYDVVLPDTGSVRLRTLIENYVTYEPPVVSLVKQYLDETRQIRDNALEIVATPGPQGLKGDKGDRGDVGLKGDKGDRGDVGPKGDKGDRGETGPKGDTGADSTVPGPPGIQGERGLKGDKGDTGADSIVPGPKGDQGDVGPRGEKGDTGADSVVPGPKGDKGDKGDTGNQGIQGIQGDPGPKGDPGDVSNDDPRLTNARPPTAHAHAVADVTGLQGALDGKAPTSHTHTEAQVTGLTAKLATKADLDGNGKVLAAQLPAVALTEFLGAVGTQAAMLALTGQRGDWCTRTDRGTDWQLIAEPSSTLANWREKTYPASPVSSVNGRTGAVDTSSADITDATTVGRNVLKATDAAAARAAIGAGTGNSNLAVGTTSATAMRGDGIQPVASLPGSPVSGILYCIPE

Physico‐chemical properties

protein length:	475 AA
molecular weight:	48199,76060 Da
isoelectric point:	4,93814
aromaticity:	0,02737
hydropathy:	-0,43158

Domain architecture

QDM57091.1

1 475 aa

STR 126–173 · STR 203–259 · STR 276–319 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR050149
Unmapped

IPR050149 PF12789

IPR008160
STR

IPR008160 IPR008160

QDM57091.1

1475 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1279
STR

DC_1279 DC_1656

DC_1279
STR

DC_1279

QDM57091.1

1475 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR050149	Unmapped	-	125	272	InterPro	Collagen superfamily	-	-	-	-
IPR008160	STR	DC_0536	126	173	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR008160	STR	DC_0536	203	259	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
PF12789	STR	DC_0212	276	319	InterPro cluster	PF12789	C-terminal	Low	Positional only	31 proteins / 33 hits

Proteins with similar domain architecture

Phage

Rhodococcus phage Whack [NCBI] · taxon 2591132

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

QDM57091.1 [NCBI]

Genbank nucleotide accession

MK967393 [NCBI]

CDS location

range 23629 -> 25056
strand +

CDS

ATGAGCGTGGTAGTCACGGAGGACTTCACAGACATCGGACTTACCAGCGATGACGTCACTGTCGAGTTCTCCGGAATGCCCATTCGGCCCAAGTCCAGCGAGACAGGGCTCATCACTGCCAAGCCAGTCGTCGTGCGTACCGTCAACGGGAAGGTAACGTCACCGTCCCTCGATGGCGGACCGGCGCGGATCAGAGTTTCGGCCGGTTCTTGGGTTCAGGCTTACGATGTCGTACTGCCCGATACAGGTTCGGTGCGACTGCGGACTTTGATCGAGAACTATGTCACCTACGAGCCGCCGGTGGTTTCGCTCGTGAAGCAGTACCTCGACGAGACTCGGCAGATCCGCGACAACGCACTGGAGATCGTCGCAACCCCTGGCCCGCAAGGACTTAAGGGAGACAAGGGCGATCGGGGCGATGTCGGACTTAAGGGAGACAAGGGCGATCGGGGCGATGTCGGACCTAAGGGAGACAAGGGCGATCGCGGCGAAACTGGACCAAAAGGTGATACCGGCGCAGACTCCACGGTCCCCGGCCCGCCCGGAATCCAGGGTGAACGAGGACTGAAGGGCGACAAGGGCGATACCGGTGCGGACTCGATCGTCCCGGGACCGAAAGGCGATCAGGGCGACGTCGGGCCGCGCGGCGAAAAGGGAGACACCGGAGCCGATTCCGTCGTTCCTGGACCCAAGGGAGACAAGGGAGACAAGGGGGATACTGGCAACCAGGGAATCCAGGGCATCCAGGGCGATCCCGGACCTAAGGGCGATCCCGGTGACGTCTCGAACGATGACCCTCGCCTGACGAACGCCCGCCCGCCGACCGCTCACGCTCACGCAGTCGCGGACGTCACCGGCCTGCAGGGTGCGCTCGACGGCAAGGCGCCGACATCCCACACGCACACCGAAGCCCAGGTGACGGGGCTGACCGCGAAACTCGCCACAAAGGCGGACCTCGACGGCAATGGCAAAGTTCTCGCCGCCCAGCTGCCTGCGGTCGCATTGACCGAGTTCCTTGGTGCAGTCGGAACCCAGGCCGCAATGCTCGCGTTGACCGGACAGCGCGGCGACTGGTGCACGCGCACCGATCGCGGCACCGACTGGCAGCTCATTGCCGAACCCTCGTCCACGCTGGCGAATTGGCGAGAGAAGACCTACCCTGCTTCCCCGGTCTCGTCGGTGAACGGCAGGACGGGAGCGGTCGACACATCCTCAGCGGATATCACCGATGCGACGACTGTGGGGCGCAACGTCTTGAAAGCGACCGATGCGGCTGCAGCCCGTGCCGCAATCGGCGCAGGTACAGGCAACTCGAACCTCGCGGTCGGAACAACCTCGGCGACTGCGATGCGTGGTGACGGCATTCAGCCTGTCGCATCCCTCCCCGGCTCCCCGGTATCGGGCATCCTCTACTGCATCCCGGAGTGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)