Phage RBP Database

Genbank accession

ASU01127.1 [GenBank]

Protein name

tail fibers protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,87

TF

Evidence RBPdetect2

Probability 0,93

Protein sequence

MNLSQIQTLHVAEEARDLAGDSIAVDDNGDLDARGRKIVNLADAEDDTDAVNYGMLKKFDNSTFNNAQKAEASANAAKSSENKAKDSELRSIEAEAKCLASAGTAMTAAADANRSKVAAEDAEQVVVPLVPIVEKASKDAAKAAADAAQAVQDVKDLGAVPVGTIATFIKTPPAGYLKCDGSTFSQTEYPELYAYLGTNVLPNFNDRYLKQPSDEVNINQGFNAQMPDHWHDVTEHTHTRGNMEITGEFRNVNNSGTWHEMTYTSGAFHSGAPEPNCAFVQSLTPSYTGLTMAYFNASRTWTGNTSASLIKTEGINRSSLSIAIGQALEVKHHTVIFAIKAAGKVSDEGLMEVTQIKADVSDLTTRVETLEEWPQSGSNERGTWVKHQDGRMECHYQAILGFQDYTEVSGALYKGPNHFWTFPEEFIATPTVHIMGNNASNAWLFCSSAFPSTTAVTYSVFSVVRGSNIQTTIGLAAFGRWK

Physico‐chemical properties

protein length:	482 AA
molecular weight:	52162,24190 Da
isoelectric point:	5,07160
aromaticity:	0,08299
hydropathy:	-0,35498

Domain architecture

ASU01127.1

1 482 aa

ATT 158–210 · STR 211–276 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

SSF88874
STR

SSF88874

IPR037053
ATT

IPR037053

IPR011083
ATT

IPR011083

ASU01127.1

1482 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0765
STR

DC_0765

ASU01127.1

1482 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
SSF88874	STR	SSF88874	157	276	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	158	210	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR011083	ATT	DC_0235	163	199	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits

Proteins with similar domain architecture

Phage

Vibrio phage JSF25 [NCBI] · taxon 2026085

Uroviricota Caudoviricetes Autographivirales Studiervirinae Chatterjeevirus

Host

Vibrio sp. [NCBI] · taxon 678

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

ASU01127.1 [NCBI]

Genbank nucleotide accession

MF574151.1 [NCBI]

CDS location

range 144 -> 1592
strand +

CDS

TTGAACCTCTCACAGATTCAAACTCTTCATGTTGCTGAAGAAGCTCGTGACCTTGCAGGTGACTCTATTGCTGTTGATGATAACGGAGACTTAGATGCTCGTGGTCGTAAGATTGTTAACCTTGCAGATGCAGAGGATGATACCGATGCAGTGAACTATGGGATGTTGAAGAAGTTCGATAATTCTACTTTCAACAATGCTCAAAAAGCTGAAGCTTCTGCTAATGCTGCTAAATCTTCTGAGAACAAAGCTAAAGACTCAGAGTTACGCTCTATCGAAGCTGAGGCAAAGTGTCTTGCATCTGCTGGTACAGCTATGACTGCTGCTGCTGATGCTAATCGTTCTAAAGTGGCTGCTGAAGATGCTGAACAAGTAGTCGTGCCGTTGGTTCCAATCGTAGAGAAAGCCTCTAAGGACGCTGCTAAAGCTGCTGCTGATGCTGCTCAAGCGGTACAGGATGTTAAAGACCTTGGTGCTGTGCCTGTTGGTACAATCGCTACGTTCATTAAAACGCCTCCTGCTGGTTACTTGAAGTGTGATGGTTCTACCTTCTCACAAACTGAATACCCTGAACTTTATGCTTACTTAGGGACTAACGTTCTACCTAACTTTAATGACCGCTATTTGAAACAGCCTTCTGATGAAGTAAACATTAACCAAGGGTTTAACGCTCAGATGCCTGACCACTGGCATGATGTTACAGAGCATACTCATACTCGTGGTAACATGGAGATTACTGGTGAATTTCGTAATGTGAATAACTCAGGTACTTGGCATGAAATGACATATACCAGTGGTGCTTTCCATTCTGGTGCTCCTGAGCCTAACTGTGCTTTCGTACAAAGTCTCACACCTTCATATACAGGTTTAACAATGGCTTACTTCAATGCTTCTCGTACTTGGACAGGTAATACCTCTGCTTCTTTGATTAAGACAGAAGGAATCAATCGGTCTTCCCTAAGTATCGCTATTGGACAGGCTCTGGAAGTTAAACACCATACGGTTATCTTTGCGATTAAAGCCGCTGGTAAGGTTTCTGATGAAGGTCTGATGGAAGTCACTCAGATTAAAGCTGATGTGTCGGATTTAACTACTCGTGTGGAAACTCTTGAAGAATGGCCTCAAAGTGGTTCTAATGAAAGAGGTACTTGGGTAAAACATCAAGATGGTCGTATGGAATGTCATTATCAAGCTATTCTTGGTTTTCAAGATTATACAGAGGTAAGTGGAGCTTTATATAAAGGTCCTAACCACTTTTGGACATTTCCTGAAGAGTTCATTGCTACACCTACGGTGCATATCATGGGTAACAACGCATCGAATGCTTGGTTATTCTGTTCTTCTGCCTTTCCATCAACTACAGCAGTAACTTATAGTGTTTTCTCAGTGGTTAGAGGCTCTAATATTCAAACCACAATCGGATTAGCTGCATTTGGACGTTGGAAATAA

Title	Authors	Date	PMID	Source
Analysis of the CRISPR-Cas system in bacteriophages active on epidemic strains of Vibrio cholerae in Bangladesh	Naser,I.B., Hoque,M.M., Nahid,M.A., Tareq,T.M., Rocky,M.K. and Faruque,S.M.	2017	29093571	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature