Protein

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Genbank accession
ASU01127.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,91
TF
Evidence Phold
Probability 1,00
Protein sequence
MNLSQIQTLHVAEEARDLAGDSIAVDDNGDLDARGRKIVNLADAEDDTDAVNYGMLKKFDNSTFNNAQKAEASANAAKSSENKAKDSELRSIEAEAKCLASAGTAMTAAADANRSKVAAEDAEQVVVPLVPIVEKASKDAAKAAADAAQAVQDVKDLGAVPVGTIATFIKTPPAGYLKCDGSTFSQTEYPELYAYLGTNVLPNFNDRYLKQPSDEVNINQGFNAQMPDHWHDVTEHTHTRGNMEITGEFRNVNNSGTWHEMTYTSGAFHSGAPEPNCAFVQSLTPSYTGLTMAYFNASRTWTGNTSASLIKTEGINRSSLSIAIGQALEVKHHTVIFAIKAAGKVSDEGLMEVTQIKADVSDLTTRVETLEEWPQSGSNERGTWVKHQDGRMECHYQAILGFQDYTEVSGALYKGPNHFWTFPEEFIATPTVHIMGNNASNAWLFCSSAFPSTTAVTYSVFSVVRGSNIQTTIGLAAFGRWK
Physico‐chemical
properties
protein length:482 AA
molecular weight: 52162,24190 Da
isoelectric point:5,07160
aromaticity:0,08299
hydropathy:-0,35498

Domains

Domains [InterPro]
SSF88874
157–276
SSF88874
IPR037053
158–210
IPR037053
IPR011083
163–199
IPR011083
ASU01127.1
1 482
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF25
[NCBI] 		2026085 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASU01127.1 [NCBI]
Genbank nucleotide accession
MF574151.1 [NCBI]
CDS location
range 144 -> 1592
strand +
CDS
TTGAACCTCTCACAGATTCAAACTCTTCATGTTGCTGAAGAAGCTCGTGACCTTGCAGGTGACTCTATTGCTGTTGATGATAACGGAGACTTAGATGCTCGTGGTCGTAAGATTGTTAACCTTGCAGATGCAGAGGATGATACCGATGCAGTGAACTATGGGATGTTGAAGAAGTTCGATAATTCTACTTTCAACAATGCTCAAAAAGCTGAAGCTTCTGCTAATGCTGCTAAATCTTCTGAGAACAAAGCTAAAGACTCAGAGTTACGCTCTATCGAAGCTGAGGCAAAGTGTCTTGCATCTGCTGGTACAGCTATGACTGCTGCTGCTGATGCTAATCGTTCTAAAGTGGCTGCTGAAGATGCTGAACAAGTAGTCGTGCCGTTGGTTCCAATCGTAGAGAAAGCCTCTAAGGACGCTGCTAAAGCTGCTGCTGATGCTGCTCAAGCGGTACAGGATGTTAAAGACCTTGGTGCTGTGCCTGTTGGTACAATCGCTACGTTCATTAAAACGCCTCCTGCTGGTTACTTGAAGTGTGATGGTTCTACCTTCTCACAAACTGAATACCCTGAACTTTATGCTTACTTAGGGACTAACGTTCTACCTAACTTTAATGACCGCTATTTGAAACAGCCTTCTGATGAAGTAAACATTAACCAAGGGTTTAACGCTCAGATGCCTGACCACTGGCATGATGTTACAGAGCATACTCATACTCGTGGTAACATGGAGATTACTGGTGAATTTCGTAATGTGAATAACTCAGGTACTTGGCATGAAATGACATATACCAGTGGTGCTTTCCATTCTGGTGCTCCTGAGCCTAACTGTGCTTTCGTACAAAGTCTCACACCTTCATATACAGGTTTAACAATGGCTTACTTCAATGCTTCTCGTACTTGGACAGGTAATACCTCTGCTTCTTTGATTAAGACAGAAGGAATCAATCGGTCTTCCCTAAGTATCGCTATTGGACAGGCTCTGGAAGTTAAACACCATACGGTTATCTTTGCGATTAAAGCCGCTGGTAAGGTTTCTGATGAAGGTCTGATGGAAGTCACTCAGATTAAAGCTGATGTGTCGGATTTAACTACTCGTGTGGAAACTCTTGAAGAATGGCCTCAAAGTGGTTCTAATGAAAGAGGTACTTGGGTAAAACATCAAGATGGTCGTATGGAATGTCATTATCAAGCTATTCTTGGTTTTCAAGATTATACAGAGGTAAGTGGAGCTTTATATAAAGGTCCTAACCACTTTTGGACATTTCCTGAAGAGTTCATTGCTACACCTACGGTGCATATCATGGGTAACAACGCATCGAATGCTTGGTTATTCTGTTCTTCTGCCTTTCCATCAACTACAGCAGTAACTTATAGTGTTTTCTCAGTGGTTAGAGGCTCTAATATTCAAACCACAATCGGATTAGCTGCATTTGGACGTTGGAAATAA

Tertiary structure

PDB ID
6ad03cb82857a4b9aafb83657e97ad5e9300113f0e9f59aff40c83467d92a61a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7379
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of the CRISPR-Cas system in bacteriophages active on epidemic strains of Vibrio cholerae in Bangladesh Naser,I.B., Hoque,M.M., Nahid,M.A., Tareq,T.M., Rocky,M.K. and Faruque,S.M. 2017 29093571 GenBank