Phage RBP Database

Genbank accession

AOO05522.1 [GenBank]

Protein name

baseplate wedge tail fiber connector

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,96

Seq2Symm

C1 confidence 0,963

C1	0,963
C3	0,456
D3	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MAKQALNLGASANDNTGDTLRIGGDKINDNFNELYSALGNGVNLTVSLLNPSSGQVLRYNGTNFVAADYSNLTSALDVNGNSIISSSNGNIPIAANGVGVITLASNSITSTFGATIDMPTQVKYKNEYASLGAAPAAADYPGYFFTIDGADDPYVNINIATGGVGDVRAKLITEYSSLDDLSDVDLTSNAPTNNQVLKWNAATNKFIPGDDVAGAGEQNIFATVAGDTGSTNADSATDTLTIAGGTNITTSVSGDTLTVDFSGTLTTTFAALTDTDTNGLTQGDNIYWNGTNWVRSSGGSPMLWYELTVPVENSSSDYLINGPGLPSGENRDPTLYVYRGFTYAFDNTVEGGGHPFRIQSTQGLTGTPYTTGQTGSGSAILYWTVPLDAPSTLYYQCTLHAQMQGTINVV

Physico‐chemical properties

protein length:	410 AA
molecular weight:	42777,17990 Da
isoelectric point:	4,05003
aromaticity:	0,08780
hydropathy:	-0,17390

Domain architecture

AOO05522.1

1 410 aa

ATT 1–136 · STR 332–410

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR036240
STR

IPR036240 IPR008972

IPR008987
ATT

IPR008987 IPR008972

G3DSA:1.20.5.960
Unmapped

G3DSA:1.20.5.960

AOO05522.1

1410 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0210
STR

DC_0210

AOO05522.1

1410 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036240	STR	IPR036240	1	58	Merged direct domain	Gp9-like superfamily	Central	Low	Positional only	146 proteins / 146 hits
IPR008987	ATT	DC_0752	3	136	InterPro cluster	Baseplate structural protein Gp9/Gp10, N-terminal domain	Central	Medium	Text match	242 proteins / 243 hits
G3DSA:1.20.5.960	Unmapped	-	13	43	Gene3D	Bacteriophage t4 gene product 9 (gp9)	-	-	-	-
IPR008972	STR	IPR008972	332	410	Merged direct domain	Cupredoxin	Central	Low	Positional only	3 proteins / 3 hits
IPR008972	STR	IPR008972	333	409	Merged direct domain	Cupredoxin	Central	Low	Positional only	3 proteins / 3 hits

Proteins with similar domain architecture

Phage

Synechococcus phage S-RIM2 [NCBI] · taxon 687800

Uroviricota Caudoviricetes Pantevenvirales Nerrivikvirus Nerrivikvirus srim2

Host

Synechococcus [NCBI] · taxon 1129

cellular organisms Bacteria Bacillati Cyanobacteriota/Melainabacteria group Cyanobacteriota Cyanophyceae

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)