Protein

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Genbank accession
YP_009592474.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,70
Protein sequence
MTCSNKPNYTPFKLQGLAPTKQWGLGRSASYERFNPNEFHALEDEVKITFPVDFRGKVKGNSNPNPSRGFSHASQIYRENVLRGSQFLSKPSLLFNGAVYNEKTLYNGAMVASTQEVNQGLMFYWEDFINPDPRIKEGDMVTFSVDVRSTGEDIPTGAVAFKGTSNFEEYYKVLEQPITKEFTRISFTTRFLSKDWEWDEAFGMFWGAENVPVTDYPMFQYDKDKLVGFIQAQESVQLEFSRPMVSTIGKTTYIESGDDMFSNNKWDWSKAVSKGRLNEFDGKYNTNGIKQDWAMPEFIPIFKGSERIHFYKKTTLTETTDAGHGYGKILFYSAANEDSYMNVYKKFPHEAGVYGGYAAEVEVPIGATHYRVHITSERGKATTEAYVQSSANDWSEFSQEWYDGLSGKLDGKTARAETFYRKEMVEMEFELHFAEAVQKALPNIFKGLTTDAEKQQRLRDIAYQFDSAMIARGRGQGNNLADWIFYRWTPDGSIEEQTMKQFRGEGLTSVTHPSSYQEWINPQGRIVSSLRSNRIIPNSMYMGTDTLSGKYDPKLTTLQLEVNGELVDKKATLDKTSEVFTFTGLKGFLKPEDKVRIAGWINRNNQWSITYSNVLMGNTPENVAEFNERAFVEADYLVTNMSIIVTQSQMDEWGFNPNLPDYRIESLERPASRTEEYMINSMVQVTHAYDIYGFVESNYPEFFGDCYTFDDRIRKINERIKQFNIVATTYSEEPWEDGNPTIFISAEARNPDRDYDVKAEINQTVELQINNSKGHFIHPNGYIYVGFARMPRSDRETGISVEAELSFDFTMDRQYDSLPRVFRYNYQKQPWFLFVRNINRSVLAPKVNTLTPINGGTRRYNFGATEDARYISMDCFIKAPAEEDIPKLMEELADFLDVGETVIQFSDNKDRYYKVILDGSTDLSQTLHVGTLTLTFVLLENTAIGEEVVESFDIDSTTGSVPFIELENMGTADAYPTYQLTFEEPVGYVDLIGTDTSANVSIGRRPKDTEDEVKVDLRPRKFYSKFTSTDGAGWTAMNDTQLPQIEGYSTKLQGTVQRVNGMANQDKWNYGDTSHRGWHGAGIVANLQKNLDDFYMEASIVATGKPVKTSANAIFLIFYDEDNNPYAYTKVGTRPQEGNLDSYVAYAGDWGKRKVVNNGAKWKDFWGKVSVQRRDNRWRLIVGQYKDRRYSPSPEASFNFGQNMLKDTRDTGWFDLPPETWGKKFARVGIFFGQYSHRPKLGHLSVRRLIVWENLEEYGDKPLEGTPIMFHEGDTVVIDSSKAQTYLNGELTPSLVDPMTDWFPITKGDNYIGVNNFKGKIDIVYNERFK
Physico‐chemical
properties
protein length:1330 AA
molecular weight: 152181,21190 Da
isoelectric point:5,19653
aromaticity:0,13083
hydropathy:-0,59316

Domains

Domains [InterPro]
DC_0142
STR
1–822
DC_0142 IPR006520 G3DSA:2.60.120.860
DC_0077
STR
691–1330
DC_0077
G3DSA:2.40.30.200
ATT
820–940
G3DSA:2.40.30.200 IPR054738
IPR008841
STR
862–937
IPR008841
YP_009592474.1
1 1330
Architecture
STR
ATT
STR
STR 1-819 | ATT 820-940 | STR 941-1330
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009592474.1
1 1330
Domain Start End Length (AA) Confidence
N-terminal 1 23 23 0,8600
Central domain 24 245 223 0,5176
C-terminal 246 1330 1084 0,2139
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-23
Central
24-245
C-terminal
246-1330

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage VD13
[NCBI] 		1458851 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus faecalis
[NCBI] 		1351 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009592474.1 [NCBI]
Genbank nucleotide accession
NC_041861 [NCBI]
CDS location
range 19366 -> 23358
strand +
CDS
ATGACATGTTCTAATAAACCTAATTACACTCCGTTTAAATTACAAGGTCTAGCCCCTACTAAACAGTGGGGCTTAGGCCGTTCTGCTAGTTATGAACGGTTTAACCCAAATGAGTTTCACGCCTTGGAGGACGAGGTTAAGATTACTTTCCCAGTGGACTTTAGAGGAAAGGTTAAAGGAAACTCTAACCCAAACCCTTCACGAGGATTTAGCCATGCCAGTCAAATCTACCGTGAAAATGTTTTAAGAGGAAGTCAATTCCTTTCTAAGCCTTCATTACTATTTAATGGAGCAGTATACAATGAGAAGACACTTTACAATGGAGCTATGGTAGCCTCTACTCAAGAGGTTAACCAAGGATTAATGTTCTATTGGGAAGACTTTATCAACCCTGACCCAAGAATTAAAGAAGGTGACATGGTAACTTTCTCAGTAGATGTCCGAAGCACTGGTGAAGATATTCCAACAGGAGCTGTGGCCTTCAAAGGGACTTCTAACTTTGAGGAATACTATAAAGTCCTTGAACAACCTATCACAAAAGAGTTTACTCGAATCTCATTCACAACTCGTTTCCTATCTAAGGACTGGGAATGGGACGAAGCCTTTGGAATGTTCTGGGGAGCAGAGAATGTTCCTGTTACAGACTATCCAATGTTCCAATATGACAAGGATAAGTTAGTTGGATTTATTCAGGCTCAAGAAAGTGTTCAACTAGAGTTCTCACGGCCTATGGTTTCAACTATCGGAAAGACTACTTACATTGAGTCTGGGGACGACATGTTCTCTAACAACAAATGGGACTGGTCTAAAGCCGTATCTAAAGGTCGTTTAAATGAATTTGATGGTAAGTATAACACAAACGGAATTAAACAAGACTGGGCAATGCCTGAGTTCATTCCTATTTTCAAAGGCTCTGAGAGAATCCACTTCTACAAAAAGACTACCTTAACGGAAACAACTGACGCTGGACATGGTTATGGTAAAATCCTATTCTACAGCGCTGCTAACGAAGATTCTTACATGAACGTATATAAGAAGTTCCCTCACGAGGCTGGCGTATATGGTGGATATGCTGCTGAAGTAGAAGTGCCTATTGGAGCTACTCACTACCGTGTTCATATAACTTCAGAAAGAGGAAAGGCTACTACAGAAGCCTATGTACAATCTTCTGCTAACGACTGGTCAGAGTTTAGCCAAGAGTGGTACGACGGACTATCAGGAAAGCTAGATGGAAAGACTGCCAGAGCTGAGACATTCTATCGTAAAGAAATGGTTGAGATGGAGTTTGAGCTACACTTTGCGGAAGCTGTACAGAAAGCTTTGCCAAACATCTTCAAAGGCCTTACTACCGATGCTGAAAAGCAACAAAGACTTCGTGACATTGCATATCAATTCGATTCAGCAATGATTGCACGAGGCCGTGGCCAAGGCAATAACTTAGCTGATTGGATTTTCTATAGATGGACTCCTGACGGCTCTATTGAAGAGCAGACAATGAAGCAGTTTAGAGGCGAGGGATTAACCTCTGTTACCCATCCGTCAAGCTATCAAGAGTGGATTAATCCACAAGGTAGAATCGTATCATCTCTACGCTCTAACCGAATCATTCCTAACTCAATGTACATGGGAACTGATACGTTAAGTGGTAAGTACGACCCTAAATTAACAACGCTTCAGCTAGAGGTTAATGGAGAGCTTGTTGATAAGAAGGCTACCTTAGATAAGACCTCAGAGGTGTTTACATTCACTGGTCTTAAAGGATTCTTAAAACCTGAAGATAAAGTTAGGATTGCTGGATGGATTAATCGTAACAACCAATGGTCAATCACCTACTCTAATGTTCTTATGGGAAACACTCCCGAAAACGTTGCTGAGTTTAACGAACGAGCTTTCGTCGAAGCTGATTACCTAGTTACAAACATGTCTATTATCGTAACTCAATCACAGATGGATGAATGGGGATTTAACCCTAATCTACCAGACTACCGAATTGAATCATTAGAACGTCCAGCAAGTCGTACTGAGGAGTATATGATTAACTCAATGGTACAGGTAACACATGCTTATGACATCTACGGATTTGTTGAAAGTAACTACCCTGAGTTTTTCGGTGACTGTTACACGTTCGATGATAGGATAAGAAAGATTAATGAGCGCATTAAACAGTTTAACATTGTAGCTACTACTTATTCAGAAGAGCCTTGGGAAGATGGCAATCCAACAATCTTCATTAGTGCTGAGGCTAGAAACCCTGACAGAGACTATGATGTTAAAGCAGAGATTAACCAAACTGTTGAGCTTCAAATTAACAATTCTAAGGGACACTTTATCCATCCTAACGGTTATATATACGTGGGATTCGCTCGTATGCCAAGAAGCGACCGTGAGACAGGAATCTCTGTAGAAGCTGAATTAAGCTTTGACTTCACAATGGACAGACAGTACGACAGCCTTCCAAGAGTCTTCCGATACAACTATCAGAAGCAGCCTTGGTTCTTGTTTGTAAGAAACATTAACAGAAGCGTTCTTGCCCCTAAAGTAAACACTCTAACTCCTATTAACGGAGGCACTAGACGTTATAACTTTGGAGCTACAGAAGACGCTCGGTATATCTCAATGGACTGCTTTATCAAAGCTCCTGCCGAAGAGGATATACCTAAGTTGATGGAAGAGCTTGCTGACTTCCTAGACGTTGGAGAAACGGTAATCCAATTCTCTGATAACAAAGACCGCTACTACAAAGTGATTCTGGATGGTTCAACAGACCTTTCCCAAACACTTCACGTAGGTACGCTGACACTGACTTTCGTACTGCTTGAGAATACAGCCATTGGCGAAGAGGTTGTAGAAAGCTTTGACATAGACAGTACAACTGGTTCAGTTCCATTCATCGAGCTTGAGAACATGGGTACGGCGGACGCTTACCCTACCTACCAACTGACCTTTGAAGAGCCTGTAGGATATGTTGACCTAATTGGTACAGATACCTCAGCCAACGTGTCAATTGGAAGACGTCCTAAAGATACTGAAGACGAGGTTAAAGTAGACCTTCGTCCTCGTAAGTTCTACAGTAAGTTTACATCTACTGATGGAGCTGGATGGACGGCTATGAATGATACTCAACTTCCTCAGATTGAAGGGTACTCAACTAAGCTTCAAGGAACTGTCCAAAGAGTTAATGGAATGGCCAATCAAGACAAGTGGAATTACGGAGACACTAGCCACAGAGGATGGCATGGAGCTGGTATCGTAGCAAACCTTCAAAAGAACCTTGACGACTTCTATATGGAGGCTTCTATTGTAGCTACAGGAAAACCAGTTAAAACTTCTGCTAACGCTATTTTCTTGATATTCTACGACGAAGACAATAACCCATACGCTTACACTAAAGTCGGTACACGTCCTCAAGAGGGTAACTTAGACAGCTACGTAGCTTACGCAGGTGACTGGGGCAAACGTAAAGTAGTTAACAACGGAGCTAAGTGGAAAGACTTCTGGGGCAAGGTTTCAGTACAGCGTAGAGACAATCGCTGGAGACTTATCGTAGGTCAGTACAAAGACCGTAGATACAGCCCTTCTCCTGAAGCTTCATTTAACTTTGGTCAAAACATGTTGAAAGATACTAGAGACACAGGCTGGTTCGATTTGCCTCCTGAAACTTGGGGTAAGAAGTTTGCAAGGGTTGGAATCTTCTTCGGACAGTATTCACATCGACCTAAGCTAGGCCACCTATCAGTACGTAGACTAATCGTGTGGGAAAACCTTGAGGAGTATGGGGACAAACCTTTAGAAGGGACTCCAATCATGTTCCACGAGGGAGACACAGTTGTAATTGACTCAAGCAAAGCTCAGACATACCTTAACGGAGAACTTACTCCATCGCTTGTAGACCCTATGACCGACTGGTTCCCAATTACCAAAGGTGATAACTACATTGGAGTAAATAACTTCAAAGGTAAGATTGACATAGTATATAACGAACGATTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cc218a35f3b24f036cd1329eacad686450d8d0f997d3124e638b8d53a3b4afbd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7044
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50