Protein

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Genbank accession
XYM48552.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,57
Protein sequence
MFEVLLGIGEYKSKQGWVQLQGPDVGRNQSTSVVVGDKLYIFGGRRATTNAFNTVSVYDFIADEWKELPAGANVNLRAAGGLVGNKFYVFGGYTGSADTNTMVEFTIDGETITPVTRSNGGLAVRNSHCMSAIDNKVYLFGGNGAQGIMYEFKSYNTDNFTVANLTPPYQIRYASLTSHDRRLYTLGGYETANTSVASFRSYNVDNNTWTAHKNGLVNRNRHSAVALNNKIYVFGGQSGTSSTPNTINNDHIFSVYDIETDTWSNIILPPGKMPPTRFYANMEVYDGKIYLSGGYTNGVYHNDLWVYDPENP
Physico‐chemical
properties
protein length:312 AA
molecular weight: 34454,79650 Da
isoelectric point:6,06832
aromaticity:0,12821
hydropathy:-0,38397

Domains

Domains [InterPro]
IPR015915
8–146
IPR015915 IPR015915
IPR015915
16–189
IPR015915 IPR006652 IPR006652
PF24681
31–211
PF24681 IPR006652
IPR006652
38–86
IPR006652 IPR015915
IPR052637
82–311
IPR052637
IPR006652
182–229
IPR006652
XYM48552.1
1 312
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiHQ
[NCBI] 		3402740 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM48552.1 [NCBI]
Genbank nucleotide accession
PV029745 [NCBI]
CDS location
range 16653 -> 17591
strand +
CDS
ATGTTTGAAGTTTTGTTAGGAATTGGGGAATATAAAAGTAAGCAAGGTTGGGTTCAGCTACAGGGACCCGATGTCGGAAGAAATCAGTCAACATCTGTTGTTGTAGGAGACAAACTTTATATCTTCGGTGGACGCCGTGCCACCACTAATGCGTTTAACACGGTATCCGTCTATGACTTCATAGCAGACGAATGGAAAGAACTACCAGCTGGAGCGAACGTTAACCTACGTGCTGCTGGTGGTTTAGTTGGTAATAAATTTTACGTATTCGGTGGATATACAGGTTCCGCTGATACGAATACAATGGTAGAGTTTACTATTGATGGCGAAACTATCACCCCTGTAACTCGATCCAATGGTGGATTGGCTGTTCGTAATAGCCACTGCATGTCGGCTATTGATAATAAAGTGTATCTGTTTGGTGGGAACGGTGCACAGGGTATTATGTATGAATTTAAAAGCTACAATACCGATAACTTTACAGTAGCTAATCTAACACCACCATACCAAATCCGTTATGCGTCTCTAACTAGTCATGATCGCCGTCTTTACACGCTCGGTGGATATGAAACCGCTAACACATCAGTTGCCTCATTTAGAAGTTATAATGTTGACAACAACACATGGACTGCCCACAAGAATGGTCTTGTAAATAGAAATAGACATTCTGCCGTAGCTCTTAATAATAAGATCTATGTATTCGGTGGTCAATCTGGTACGAGCTCTACTCCAAACACTATTAACAACGATCATATTTTCAGTGTCTATGATATTGAAACCGATACATGGTCAAACATAATACTTCCTCCGGGTAAGATGCCCCCTACTAGATTCTATGCTAATATGGAAGTCTACGACGGTAAGATTTATTTATCTGGTGGTTACACGAATGGTGTGTACCACAATGATCTATGGGTATACGATCCAGAGAATCCATGA

Tertiary structure

PDB ID
c533e4b225e99fa65ebea3ab6bf31e1553551c9befe00c48ce7ecbe6b14a0ec9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9301
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Characterization of Phikzvirus realted Pseudomonas phage phiHQ: A Promising Candidate Against Uropathogens Qamar,H., Khan,M.S.I., Afzal,S. and Malik,K. 2022-09-14 — GenBank