Protein

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Genbank accession
AOV62429.1 [GenBank]
Protein name
collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect2
Probability 0,74
Seq2Symm
C3 confidence 0,997
C3 0,997
C1 0,115
D3 0,005
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MGDVTYKWDGSKWISTSVAPVNIGATGPSGPAGPTGATGSTVVDGSDISAGVVTATEFDGNLSGNVAGDTTGIHNGDVYARDGSKIILETAINNGDTAHYTGTVTGDVTGDTTGTHYGTNTGQQHGDVYTNDGGQQVIDTAAIPSPLFKGDAEGLDGDPNIQVTNLTVVGLTNVGVVTAAEITTDDLNADSVIAGFVTSVNSYTSGIATAGKFYGDGSNLTGIATQSGATGATGPQGSQGATGIPGPFGPYGITGATGATGVDGPVGSTGATGDPGLAAMCFTYRYDSDTDTNDEPLSGRISFNNSNPENATVIAINDTNGDAVDISNFFGLFGAGSKVYIQEERDASSFILLTLNAGASDQGGWYKFTNFTVNISGNVTFTNLNKLMVCVQPQGPAGPTGATGLTGAGTSATSFQWNDHIIPDSTESYDIGSAEYKVRHLFLSDNSVYTDSGEVRVGFSTQVGTSTKMLKGTKLQEIVANSVDFADFKVKMASEDFGSL
Physico‐chemical
properties
protein length:500 AA
molecular weight: 50842,58590 Da
isoelectric point:4,13262
aromaticity:0,07800
hydropathy:-0,18180

Taxonomy

Phage
Synechococcus phage S-CAM7 [NCBI] · taxon 1883368
Uroviricota Caudoviricetes Pantevenvirales Mazuvirus Mazuvirus scam7
Host
Synechococcus sp. WH 7803 [NCBI] · taxon 32051
Bacteria Cyanobacteria Oscillatoriophycideae Chroococcales Synechococcus

Coding sequence (CDS)

Genbank protein accession
AOV62429.1 [NCBI]
Genbank nucleotide accession
KU686213 [NCBI]
CDS location
range 179492 -> 180994
strand +
CDS
GTGGGTGATGTTACATATAAGTGGGATGGATCTAAATGGATCTCTACCAGCGTAGCCCCAGTAAATATTGGAGCAACTGGACCATCTGGTCCTGCTGGACCTACTGGAGCTACAGGATCAACTGTTGTTGATGGTAGTGATATCTCTGCTGGTGTAGTGACCGCAACAGAATTTGACGGTAATCTCAGTGGAAATGTCGCTGGCGATACTACTGGTATCCATAATGGGGATGTATATGCTAGAGATGGATCTAAAATTATATTAGAAACTGCTATTAATAATGGTGATACAGCACACTATACAGGCACAGTAACTGGCGACGTAACTGGAGATACAACAGGAACACATTACGGAACCAATACCGGTCAGCAGCACGGAGATGTGTACACCAATGACGGTGGTCAGCAAGTCATAGATACTGCTGCTATTCCATCTCCCCTATTCAAAGGTGATGCGGAAGGTTTAGATGGTGACCCAAATATACAAGTAACTAACCTAACAGTAGTTGGCTTAACTAATGTTGGCGTTGTAACTGCTGCCGAAATAACTACAGATGATCTTAATGCTGATAGTGTAATTGCTGGGTTTGTTACATCAGTAAACTCATATACTAGTGGAATCGCTACTGCTGGAAAGTTTTATGGTGATGGTTCAAACCTAACTGGAATAGCAACACAGTCTGGTGCTACTGGAGCCACTGGTCCCCAAGGTTCTCAAGGTGCTACTGGTATTCCTGGTCCTTTTGGTCCATATGGAATCACAGGAGCTACTGGTGCAACTGGTGTTGATGGTCCTGTTGGTTCTACTGGAGCCACAGGTGATCCTGGTTTAGCTGCTATGTGCTTCACATATAGGTATGATAGTGATACTGATACTAACGATGAGCCATTGAGTGGTCGCATCAGCTTCAACAATTCAAACCCAGAAAATGCAACTGTTATTGCGATCAATGATACTAATGGAGATGCTGTTGATATCTCAAACTTCTTTGGTCTATTTGGTGCTGGATCTAAAGTTTATATTCAAGAGGAGAGAGATGCTAGTAGCTTTATTCTTCTCACACTAAACGCAGGAGCTTCTGATCAAGGTGGTTGGTATAAGTTCACCAACTTTACAGTCAACATATCTGGTAATGTTACCTTTACTAACCTCAATAAGTTGATGGTTTGTGTTCAGCCACAAGGTCCAGCTGGTCCAACGGGCGCAACGGGTCTTACTGGAGCTGGAACTTCGGCAACATCATTCCAGTGGAACGATCATATCATCCCAGATTCAACGGAGTCTTATGATATAGGTTCAGCAGAATATAAAGTTCGCCACCTATTTTTAAGTGATAACTCTGTTTATACTGATAGTGGGGAGGTTAGAGTTGGCTTCTCAACCCAAGTTGGAACATCAACCAAGATGCTAAAAGGAACAAAACTACAAGAGATTGTGGCTAATTCTGTTGACTTCGCAGACTTTAAAGTTAAGATGGCTTCGGAGGATTTTGGTTCCTTATGA

Genome Context

Tertiary structure

AOV62429.1
ESMFold2 structure
Source ESMFold2
pLDDT 61.6
Oligomeric state monomer
Download structure