Protein

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Genbank accession
AOV62429.1 [GenBank]
Protein name
collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MGDVTYKWDGSKWISTSVAPVNIGATGPSGPAGPTGATGSTVVDGSDISAGVVTATEFDGNLSGNVAGDTTGIHNGDVYARDGSKIILETAINNGDTAHYTGTVTGDVTGDTTGTHYGTNTGQQHGDVYTNDGGQQVIDTAAIPSPLFKGDAEGLDGDPNIQVTNLTVVGLTNVGVVTAAEITTDDLNADSVIAGFVTSVNSYTSGIATAGKFYGDGSNLTGIATQSGATGATGPQGSQGATGIPGPFGPYGITGATGATGVDGPVGSTGATGDPGLAAMCFTYRYDSDTDTNDEPLSGRISFNNSNPENATVIAINDTNGDAVDISNFFGLFGAGSKVYIQEERDASSFILLTLNAGASDQGGWYKFTNFTVNISGNVTFTNLNKLMVCVQPQGPAGPTGATGLTGAGTSATSFQWNDHIIPDSTESYDIGSAEYKVRHLFLSDNSVYTDSGEVRVGFSTQVGTSTKMLKGTKLQEIVANSVDFADFKVKMASEDFGSL
Physico‐chemical
properties
protein length:500 AA
molecular weight: 50842,58590 Da
isoelectric point:4,13262
aromaticity:0,07800
hydropathy:-0,18180

Domains

Domains [InterPro]
PTHR24637
Unmapped
24–407
PTHR24637
DC_2166
ATT
165–389
DC_2166 DC_1687
IPR008160
STR
227–276
IPR008160
AOV62429.1
1 500
Architecture
ATT
STR
ATT 165-389 | STR 392-497 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM7
[NCBI] 		1883368 Uroviricota > Caudoviricetes > Pantevenvirales > Mazuvirus > Mazuvirus scam7
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOV62429.1 [NCBI]
Genbank nucleotide accession
KU686213 [NCBI]
CDS location
range 179492 -> 180994
strand +
CDS
GTGGGTGATGTTACATATAAGTGGGATGGATCTAAATGGATCTCTACCAGCGTAGCCCCAGTAAATATTGGAGCAACTGGACCATCTGGTCCTGCTGGACCTACTGGAGCTACAGGATCAACTGTTGTTGATGGTAGTGATATCTCTGCTGGTGTAGTGACCGCAACAGAATTTGACGGTAATCTCAGTGGAAATGTCGCTGGCGATACTACTGGTATCCATAATGGGGATGTATATGCTAGAGATGGATCTAAAATTATATTAGAAACTGCTATTAATAATGGTGATACAGCACACTATACAGGCACAGTAACTGGCGACGTAACTGGAGATACAACAGGAACACATTACGGAACCAATACCGGTCAGCAGCACGGAGATGTGTACACCAATGACGGTGGTCAGCAAGTCATAGATACTGCTGCTATTCCATCTCCCCTATTCAAAGGTGATGCGGAAGGTTTAGATGGTGACCCAAATATACAAGTAACTAACCTAACAGTAGTTGGCTTAACTAATGTTGGCGTTGTAACTGCTGCCGAAATAACTACAGATGATCTTAATGCTGATAGTGTAATTGCTGGGTTTGTTACATCAGTAAACTCATATACTAGTGGAATCGCTACTGCTGGAAAGTTTTATGGTGATGGTTCAAACCTAACTGGAATAGCAACACAGTCTGGTGCTACTGGAGCCACTGGTCCCCAAGGTTCTCAAGGTGCTACTGGTATTCCTGGTCCTTTTGGTCCATATGGAATCACAGGAGCTACTGGTGCAACTGGTGTTGATGGTCCTGTTGGTTCTACTGGAGCCACAGGTGATCCTGGTTTAGCTGCTATGTGCTTCACATATAGGTATGATAGTGATACTGATACTAACGATGAGCCATTGAGTGGTCGCATCAGCTTCAACAATTCAAACCCAGAAAATGCAACTGTTATTGCGATCAATGATACTAATGGAGATGCTGTTGATATCTCAAACTTCTTTGGTCTATTTGGTGCTGGATCTAAAGTTTATATTCAAGAGGAGAGAGATGCTAGTAGCTTTATTCTTCTCACACTAAACGCAGGAGCTTCTGATCAAGGTGGTTGGTATAAGTTCACCAACTTTACAGTCAACATATCTGGTAATGTTACCTTTACTAACCTCAATAAGTTGATGGTTTGTGTTCAGCCACAAGGTCCAGCTGGTCCAACGGGCGCAACGGGTCTTACTGGAGCTGGAACTTCGGCAACATCATTCCAGTGGAACGATCATATCATCCCAGATTCAACGGAGTCTTATGATATAGGTTCAGCAGAATATAAAGTTCGCCACCTATTTTTAAGTGATAACTCTGTTTATACTGATAGTGGGGAGGTTAGAGTTGGCTTCTCAACCCAAGTTGGAACATCAACCAAGATGCTAAAAGGAACAAAACTACAAGAGATTGTGGCTAATTCTGTTGACTTCGCAGACTTTAAAGTTAAGATGGCTTCGGAGGATTTTGGTTCCTTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e0535058fa4d876972430925eb300b4ac8990f46437a53700128ce8a9c0549a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6090
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50