Protein

View in Explore
Genbank accession
WKV24243.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,99
Seq2Symm
C3 confidence 1,000
C3 1,000
C1 0,001
D3 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MANTTLTQFPAGQSQYRITFDYLSRQFVVVTLINSNDVTQNRVLKAGDDYRFLNATTLEILASQTGFDIIQINRFTSTDLLVKFRDGSVLTAGDLTNAELQAIHISEEGRDQTTGLAMQYAEQAVAAGKEAEEILNQIILLGKNGYTPVGSFESGGTVTLQNDVLQYGSGTSLTHWRWEGSLPKVVPAGSTPTSAGGIGKGKWVDVTDATLRGQLKSETGSQLVTYKMHKVAGSVMRSLEDRLAQSGSVLDFGADPTGMTDSSDAFQKAIDLLPHVFVPQGIYRIDKSLVAKRSVTISGEGNTGQINRLMSFINMNGNIPFIRNWQEVAQPNSMFQLHVKRLFIQYNPVSRPEMSNWQGHSGKVAFLFESTTPEANGLEFSSFEDIVVLGAWQFMKDTTGTYMTRVTRCEARQCRIGIQKATGTTILLEHFYANGCRLAYSFGAMSTLKMVCCAMDNTAISIAGSGQGIAYGMEINGVRSFSIDVFDAEVNRVSTDGGDIASLIRITDSVGEISRFTGLRNDLVTEGAAEGGSVALFHLLNNSRVRFTDCEGEFFRAEAPPYTGSGYAVTLLTDTTSEAYVTNSRFKAPAKKTGTTGTPLALVLAQGNVTFGFGCDISGPRSGGTRLYASGGTLFSDSFATARASTPVGANNPTPIITLSAPGAYMVFAHVAGSGKEYMASAQVIYDGTASAIFKMVDGAFLEITAAGAVISLVSTGATTVTWSYIKL
Physico‐chemical
properties
protein length:728 AA
molecular weight: 78106,25280 Da
isoelectric point:5,73013
aromaticity:0,08929
hydropathy:-0,03805

Domains

View on InterPro
Domain architecture
WKV24243.1
1 728 aa
ATT 13–114 · ATT 146–206 · STR 207–535 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
WKV24243.1
1 728 aa
Domain Start End Length (AA) Confidence
N-terminal 1 261 261 0,9940
Central domain 262 622 362 0,9930
C-terminal 623 728 105 0,9595
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pectobacterium phage LET1 [NCBI] · taxon 3061288
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Pectobacterium sp. [NCBI] · taxon 1913084
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
WKV24243.1 [NCBI]
Genbank nucleotide accession
OQ939567 [NCBI]
CDS location
range 33054 -> 35240
strand +
CDS
ATGGCTAACACTACGCTGACTCAGTTTCCTGCTGGTCAGTCTCAATATCGGATTACTTTTGACTACCTGTCTCGACAATTCGTTGTCGTCACGCTGATTAATAGTAATGACGTAACTCAAAACCGTGTGCTGAAAGCTGGGGATGACTATCGGTTCCTTAACGCCACGACTTTGGAAATCCTCGCGTCTCAGACCGGATTCGATATCATCCAGATTAACCGCTTCACGTCTACAGACCTCCTGGTAAAGTTTAGAGACGGTTCGGTCCTGACTGCTGGTGACCTGACAAACGCTGAGCTTCAGGCAATCCATATTTCTGAGGAAGGTCGAGACCAGACTACAGGTCTAGCTATGCAGTACGCGGAGCAGGCAGTAGCAGCGGGTAAAGAGGCTGAGGAGATTCTTAACCAAATTATCCTTCTGGGTAAAAACGGGTACACCCCTGTTGGGTCCTTTGAGTCCGGCGGCACTGTGACGTTACAGAATGACGTTTTGCAGTACGGCTCAGGAACCTCTCTGACTCATTGGCGCTGGGAGGGCTCTCTACCTAAAGTCGTTCCTGCTGGCTCAACTCCTACGTCCGCTGGCGGTATCGGGAAGGGTAAGTGGGTAGACGTCACGGATGCGACTCTGCGTGGGCAGCTTAAAAGCGAGACTGGCTCTCAGCTGGTGACCTATAAGATGCACAAGGTCGCGGGTTCGGTGATGCGTTCGCTTGAGGACCGACTAGCTCAGTCAGGAAGCGTCCTGGACTTTGGTGCTGACCCAACGGGGATGACTGACTCGTCTGATGCTTTCCAGAAGGCAATCGACCTACTGCCACACGTCTTCGTACCTCAAGGCATCTACCGCATCGATAAGTCGCTGGTGGCTAAGCGTAGCGTGACCATCTCTGGCGAAGGTAACACCGGGCAGATTAACCGACTCATGTCGTTCATCAACATGAATGGCAACATCCCGTTCATCCGTAACTGGCAGGAAGTAGCACAGCCTAACAGCATGTTCCAGCTCCACGTCAAGCGTCTGTTCATTCAGTACAACCCGGTGTCACGACCGGAGATGTCAAACTGGCAGGGGCACAGCGGTAAGGTGGCGTTCCTCTTTGAGTCCACAACCCCTGAGGCTAACGGACTGGAGTTCTCGTCCTTTGAGGATATCGTGGTGCTGGGTGCCTGGCAGTTCATGAAGGATACCACTGGTACTTATATGACTCGCGTGACTCGCTGTGAAGCCCGTCAGTGCCGCATTGGTATTCAGAAGGCGACCGGGACTACAATCCTTCTGGAGCACTTCTACGCAAACGGGTGTCGACTTGCTTACTCATTTGGTGCTATGTCCACCCTTAAGATGGTGTGCTGCGCGATGGATAACACGGCCATCTCTATCGCTGGGTCTGGACAGGGGATTGCCTATGGTATGGAAATCAACGGTGTTCGTAGCTTCAGTATCGACGTCTTTGACGCTGAGGTAAACCGTGTGTCGACCGACGGTGGCGACATCGCATCTCTGATTCGAATCACTGATAGCGTTGGTGAAATCTCTCGGTTTACTGGTCTGCGTAACGACCTGGTAACTGAAGGTGCTGCTGAGGGTGGTAGCGTGGCTCTGTTCCACCTGCTCAACAACTCCCGCGTCCGGTTCACAGACTGTGAGGGAGAGTTCTTCCGTGCTGAAGCTCCGCCTTACACTGGTAGTGGCTACGCTGTTACCCTCCTGACGGACACTACGTCTGAGGCTTACGTCACCAACTCCCGGTTCAAGGCTCCCGCCAAGAAGACAGGGACCACTGGTACACCTCTCGCGCTGGTTCTGGCCCAGGGTAACGTGACCTTCGGTTTTGGCTGTGACATCTCCGGTCCTCGCTCTGGTGGTACTCGCCTGTATGCTTCCGGTGGGACTCTGTTCTCCGATAGCTTTGCGACCGCACGGGCTTCAACCCCGGTAGGTGCGAACAACCCGACTCCTATAATCACCTTGAGTGCGCCAGGTGCCTACATGGTGTTTGCTCACGTTGCGGGCAGCGGTAAGGAGTATATGGCCTCGGCCCAGGTAATCTACGATGGTACTGCGTCTGCTATCTTCAAGATGGTCGATGGTGCCTTCCTGGAAATCACGGCTGCGGGTGCTGTAATCTCTCTGGTCTCAACCGGAGCGACTACGGTCACCTGGTCTTACATTAAGCTCTAA

Genome Context

Tertiary structure

WKV24243.1
ESMFold structure
Source ESMFold
pLDDT 80.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Phenotypic Characterization and Complete Genome Analysis of a Novel Lytic Phage Infecting Pectobacterium sp. Itang,L.G.C., Silva,B.B.I., Bautista,M.J.A., Baybay,Z.K., Montecillo,A.D. and Encabo,J.R. 2025-06-27 — GenBank