Protein

View in Explore
Genbank accession
WKV24243.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,99
Protein sequence
MANTTLTQFPAGQSQYRITFDYLSRQFVVVTLINSNDVTQNRVLKAGDDYRFLNATTLEILASQTGFDIIQINRFTSTDLLVKFRDGSVLTAGDLTNAELQAIHISEEGRDQTTGLAMQYAEQAVAAGKEAEEILNQIILLGKNGYTPVGSFESGGTVTLQNDVLQYGSGTSLTHWRWEGSLPKVVPAGSTPTSAGGIGKGKWVDVTDATLRGQLKSETGSQLVTYKMHKVAGSVMRSLEDRLAQSGSVLDFGADPTGMTDSSDAFQKAIDLLPHVFVPQGIYRIDKSLVAKRSVTISGEGNTGQINRLMSFINMNGNIPFIRNWQEVAQPNSMFQLHVKRLFIQYNPVSRPEMSNWQGHSGKVAFLFESTTPEANGLEFSSFEDIVVLGAWQFMKDTTGTYMTRVTRCEARQCRIGIQKATGTTILLEHFYANGCRLAYSFGAMSTLKMVCCAMDNTAISIAGSGQGIAYGMEINGVRSFSIDVFDAEVNRVSTDGGDIASLIRITDSVGEISRFTGLRNDLVTEGAAEGGSVALFHLLNNSRVRFTDCEGEFFRAEAPPYTGSGYAVTLLTDTTSEAYVTNSRFKAPAKKTGTTGTPLALVLAQGNVTFGFGCDISGPRSGGTRLYASGGTLFSDSFATARASTPVGANNPTPIITLSAPGAYMVFAHVAGSGKEYMASAQVIYDGTASAIFKMVDGAFLEITAAGAVISLVSTGATTVTWSYIKL
Physico‐chemical
properties
protein length:728 AA
molecular weight: 78106,25280 Da
isoelectric point:5,73013
aromaticity:0,08929
hydropathy:-0,03805

Domains

View on InterPro
Domain architecture
WKV24243.1
1 728 aa
ATT 13–114 · ATT 146–206 · STR 207–535 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
WKV24243.1
1 728 aa
Domain Start End Length (AA) Confidence
N-terminal 1 261 261 0,9940
Central domain 262 622 362 0,9930
C-terminal 623 728 105 0,9595
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pectobacterium phage LET1 [NCBI] · taxon 3061288
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Pectobacterium sp. [NCBI] · taxon 1913084
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
WKV24243.1 [NCBI]
Genbank nucleotide accession
OQ939567 [NCBI]
CDS location
range 33054 -> 35240
strand +
CDS
ATGGCTAACACTACGCTGACTCAGTTTCCTGCTGGTCAGTCTCAATATCGGATTACTTTTGACTACCTGTCTCGACAATTCGTTGTCGTCACGCTGATTAATAGTAATGACGTAACTCAAAACCGTGTGCTGAAAGCTGGGGATGACTATCGGTTCCTTAACGCCACGACTTTGGAAATCCTCGCGTCTCAGACCGGATTCGATATCATCCAGATTAACCGCTTCACGTCTACAGACCTCCTGGTAAAGTTTAGAGACGGTTCGGTCCTGACTGCTGGTGACCTGACAAACGCTGAGCTTCAGGCAATCCATATTTCTGAGGAAGGTCGAGACCAGACTACAGGTCTAGCTATGCAGTACGCGGAGCAGGCAGTAGCAGCGGGTAAAGAGGCTGAGGAGATTCTTAACCAAATTATCCTTCTGGGTAAAAACGGGTACACCCCTGTTGGGTCCTTTGAGTCCGGCGGCACTGTGACGTTACAGAATGACGTTTTGCAGTACGGCTCAGGAACCTCTCTGACTCATTGGCGCTGGGAGGGCTCTCTACCTAAAGTCGTTCCTGCTGGCTCAACTCCTACGTCCGCTGGCGGTATCGGGAAGGGTAAGTGGGTAGACGTCACGGATGCGACTCTGCGTGGGCAGCTTAAAAGCGAGACTGGCTCTCAGCTGGTGACCTATAAGATGCACAAGGTCGCGGGTTCGGTGATGCGTTCGCTTGAGGACCGACTAGCTCAGTCAGGAAGCGTCCTGGACTTTGGTGCTGACCCAACGGGGATGACTGACTCGTCTGATGCTTTCCAGAAGGCAATCGACCTACTGCCACACGTCTTCGTACCTCAAGGCATCTACCGCATCGATAAGTCGCTGGTGGCTAAGCGTAGCGTGACCATCTCTGGCGAAGGTAACACCGGGCAGATTAACCGACTCATGTCGTTCATCAACATGAATGGCAACATCCCGTTCATCCGTAACTGGCAGGAAGTAGCACAGCCTAACAGCATGTTCCAGCTCCACGTCAAGCGTCTGTTCATTCAGTACAACCCGGTGTCACGACCGGAGATGTCAAACTGGCAGGGGCACAGCGGTAAGGTGGCGTTCCTCTTTGAGTCCACAACCCCTGAGGCTAACGGACTGGAGTTCTCGTCCTTTGAGGATATCGTGGTGCTGGGTGCCTGGCAGTTCATGAAGGATACCACTGGTACTTATATGACTCGCGTGACTCGCTGTGAAGCCCGTCAGTGCCGCATTGGTATTCAGAAGGCGACCGGGACTACAATCCTTCTGGAGCACTTCTACGCAAACGGGTGTCGACTTGCTTACTCATTTGGTGCTATGTCCACCCTTAAGATGGTGTGCTGCGCGATGGATAACACGGCCATCTCTATCGCTGGGTCTGGACAGGGGATTGCCTATGGTATGGAAATCAACGGTGTTCGTAGCTTCAGTATCGACGTCTTTGACGCTGAGGTAAACCGTGTGTCGACCGACGGTGGCGACATCGCATCTCTGATTCGAATCACTGATAGCGTTGGTGAAATCTCTCGGTTTACTGGTCTGCGTAACGACCTGGTAACTGAAGGTGCTGCTGAGGGTGGTAGCGTGGCTCTGTTCCACCTGCTCAACAACTCCCGCGTCCGGTTCACAGACTGTGAGGGAGAGTTCTTCCGTGCTGAAGCTCCGCCTTACACTGGTAGTGGCTACGCTGTTACCCTCCTGACGGACACTACGTCTGAGGCTTACGTCACCAACTCCCGGTTCAAGGCTCCCGCCAAGAAGACAGGGACCACTGGTACACCTCTCGCGCTGGTTCTGGCCCAGGGTAACGTGACCTTCGGTTTTGGCTGTGACATCTCCGGTCCTCGCTCTGGTGGTACTCGCCTGTATGCTTCCGGTGGGACTCTGTTCTCCGATAGCTTTGCGACCGCACGGGCTTCAACCCCGGTAGGTGCGAACAACCCGACTCCTATAATCACCTTGAGTGCGCCAGGTGCCTACATGGTGTTTGCTCACGTTGCGGGCAGCGGTAAGGAGTATATGGCCTCGGCCCAGGTAATCTACGATGGTACTGCGTCTGCTATCTTCAAGATGGTCGATGGTGCCTTCCTGGAAATCACGGCTGCGGGTGCTGTAATCTCTCTGGTCTCAACCGGAGCGACTACGGTCACCTGGTCTTACATTAAGCTCTAA

Genome Context

Tertiary structure

WKV24243.1
ESMFold structure
Source ESMFold
pLDDT 80.4
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Phenotypic Characterization and Complete Genome Analysis of a Novel Lytic Phage Infecting Pectobacterium sp. Itang,L.G.C., Silva,B.B.I., Bautista,M.J.A., Baybay,Z.K., Montecillo,A.D. and Encabo,J.R. 2025-06-27 — GenBank