Protein

View in Explore
Genbank accession
QGH45068.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,54
Protein sequence
MAKAGGTYPDILQGVSQKPAHRRKPGQTHEQVNVLSDPVNGLVRRRGTRFAASHAVVTSSELRNMDVFDFMQEGKEYALLYRRDASSASSATFAFLYNKTDEQFIPLVYENSTWVNTLVSGGASSLAAIGSYVYIAGNTTIPSATSINLWEEQSNIQRLAAWVRTGKYNTTYTVNLTRTDGTVLTVTYKTVTASYPGTLDTTDIPFYLPGGTEPDPAYQKYVNDRVNEYNSAVNEWIVTSAEQTRPEYIAEKLSDLLVDAGVTATYIKGGIVIDDDQFTDITVDDEGDGTTFYAAGQEITDATYATKFHWHGKIVRVRPSGAGADETYYLRAELENGETSGYGSVDWYETAGVACTIDNLLTQLYIYNGTGYIARNGAGLTSLVPASGEHPAYAPRVVGDGLTSPIPWFIDKPITMLSVFQDRLIVGAQNYVNASRAADYLNFWRGSAVTIADNDPIEIFAHGSEGDVLRHGTLYNGNLVIFGDRQQYGISGDAVFSPKNPLIKAFSANKDSVDAKAQTSGNYIFYAQYGSEGTSLHQMRVGALNGQQTVTDEMSEELDSWLSGTPLQITALTAPNLVMFRTREHPQDFYLYRYEDNKNNGQRVVDAWSKFQYHPALGEVIGISSYKKNGLVFTARGSLVACDVFDPKGEPDSHGCIDSWASFGTPTGVQTASASIVVNSTSPYFLLGCPYAQSSDFLSQFDDLNAAALEYGVVSDAYVIPTNPFPRDQNGQAVLDGRMSLNKVTVDVENTAGMIATVATRNSAVTTTDFEGRILGDSDNLIGRQPVYRGQLNVSIGREVRECTYEIRSKNWLPLRVTGLSWTGQTFNNVRRVS
Physico‐chemical
properties
protein length:834 AA
molecular weight: 91333,28430 Da
isoelectric point:4,95564
aromaticity:0,10552
hydropathy:-0,30168

Domains

Domains [InterPro]
IPR058003
TTP
1–627
IPR058003 IPR058003
DC_0058
STR
1–834
DC_0058
QGH45068.1
1 834
Architecture
STR
STR 1-834
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGH45068.1
1 834
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,8313
Central domain 186 386 202 0,3898
C-terminal 387 834 447 0,2819
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-386
C-terminal
387-834

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteriophage Titan-X
[NCBI] 		2662140 Uroviricota > Caudoviricetes > Autographivirales > Gujervirinae > Pradovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGH45068.1 [NCBI]
Genbank nucleotide accession
MN478375 [NCBI]
CDS location
range 25612 -> 28116
strand +
CDS
ATGGCAAAGGCAGGCGGAACCTATCCCGACATCCTTCAGGGTGTCAGTCAGAAACCTGCGCATCGTCGTAAGCCCGGTCAGACGCACGAGCAAGTCAACGTGCTGTCCGATCCGGTGAACGGTCTGGTGCGTCGTCGCGGTACGCGCTTCGCTGCTTCCCATGCCGTTGTCACGTCGTCGGAGCTGCGCAACATGGACGTGTTCGACTTCATGCAGGAGGGCAAAGAGTACGCCCTGCTGTACCGTCGTGACGCGTCCAGCGCAAGCAGCGCGACCTTCGCGTTCCTCTACAACAAGACGGACGAGCAGTTCATCCCGCTGGTCTACGAGAACAGCACGTGGGTCAACACTCTGGTCAGCGGTGGTGCATCATCGCTCGCGGCCATCGGCTCGTACGTCTACATCGCAGGCAACACCACGATCCCCTCGGCCACGAGCATCAACCTGTGGGAGGAGCAGAGTAACATCCAGCGCCTCGCTGCGTGGGTTCGCACTGGCAAGTACAACACCACGTACACCGTCAACCTAACGCGCACCGATGGAACCGTGCTGACCGTGACGTACAAGACCGTAACCGCGTCGTACCCCGGAACGCTTGACACCACCGACATCCCGTTCTACCTGCCGGGTGGTACGGAACCGGACCCGGCGTACCAGAAGTACGTCAACGACCGAGTCAACGAGTACAACTCCGCAGTCAACGAGTGGATCGTGACTAGCGCCGAGCAAACCCGCCCGGAGTACATCGCCGAGAAGCTGTCGGATTTGCTGGTGGACGCAGGCGTAACTGCCACGTACATCAAGGGTGGTATCGTCATTGACGACGACCAGTTCACGGACATCACGGTGGACGACGAGGGCGACGGTACCACGTTCTACGCTGCGGGTCAGGAGATTACCGATGCTACCTACGCTACCAAGTTCCACTGGCACGGTAAGATCGTGCGGGTGCGGCCGAGCGGTGCGGGTGCTGACGAGACGTACTACCTGCGCGCGGAGTTGGAGAACGGTGAGACTTCGGGCTACGGCTCGGTGGACTGGTACGAGACTGCGGGCGTGGCCTGCACCATCGACAACTTGCTGACTCAGCTCTACATCTACAACGGTACCGGGTACATCGCACGCAACGGTGCGGGCCTGACCTCCCTCGTCCCGGCTAGTGGTGAGCATCCGGCGTACGCCCCGCGCGTGGTGGGTGATGGCCTGACCTCACCGATCCCGTGGTTCATCGACAAGCCTATCACGATGCTTTCGGTGTTCCAAGATCGACTGATCGTTGGTGCGCAGAACTACGTCAACGCGTCACGAGCGGCGGACTACCTGAACTTCTGGCGCGGCTCGGCAGTTACCATCGCCGACAACGACCCGATTGAAATCTTCGCGCACGGCTCGGAGGGCGACGTGCTGCGGCATGGTACGCTCTACAACGGCAACCTCGTGATCTTCGGTGATCGTCAACAGTACGGCATCAGCGGCGACGCGGTGTTCAGTCCGAAGAACCCGCTTATCAAGGCGTTCAGTGCGAACAAGGATTCGGTGGACGCGAAGGCGCAGACCTCGGGCAACTACATCTTCTATGCGCAGTACGGCAGCGAAGGCACGAGCCTGCACCAGATGCGAGTGGGCGCACTCAACGGACAGCAGACTGTCACCGACGAGATGTCGGAGGAGCTGGACTCGTGGCTCTCGGGCACGCCGTTGCAGATCACCGCACTGACGGCCCCTAACCTCGTGATGTTCCGCACGCGTGAGCACCCGCAGGACTTCTACCTGTACCGGTATGAAGACAACAAGAACAACGGGCAGCGCGTCGTGGATGCGTGGTCGAAGTTCCAGTACCACCCGGCGCTGGGCGAGGTGATCGGCATCAGCAGCTACAAGAAGAACGGGCTGGTGTTCACGGCTCGTGGTTCACTGGTGGCGTGTGACGTGTTCGACCCGAAGGGCGAGCCGGACAGCCACGGCTGCATCGACAGCTGGGCGAGTTTCGGTACACCTACAGGCGTACAGACTGCGAGCGCAAGCATCGTAGTCAACAGCACCAGCCCGTACTTCCTGCTGGGTTGTCCTTACGCGCAGTCCTCCGACTTCCTGTCCCAGTTTGATGACCTCAACGCTGCGGCGCTGGAATACGGCGTGGTGTCCGACGCTTACGTGATCCCGACCAATCCGTTCCCTCGGGACCAGAACGGTCAGGCAGTGCTCGATGGCCGCATGTCCCTCAACAAGGTGACTGTGGACGTGGAGAACACGGCAGGCATGATCGCCACGGTGGCAACCCGCAACAGCGCGGTAACCACCACGGACTTCGAGGGTCGCATCCTCGGTGACTCCGACAACCTGATCGGGCGGCAACCGGTGTACCGGGGACAGCTGAACGTCAGCATCGGGCGCGAGGTGCGCGAGTGCACCTACGAGATTCGCAGCAAGAACTGGCTCCCTCTCCGGGTGACGGGTCTGAGCTGGACGGGTCAGACTTTCAACAACGTACGGAGGGTTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
49c622940531abb025c65d3296b02f443b24fd33612f031266dfb401e26a5fab
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2893
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phages that infect the bacterial plant pathogen Lightbourn,L., Amarillas,L., Estrada,M., Leon,R. and Leon,J. — — GenBank