Protein

View in Explore
Genbank accession
URO83535.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MADYKLSELNSIDTIRSDDLLHVRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMTGDLGIVKLLYGGKAVFDPTGSSEITIGDVLKTFKINANGLKLTIADASRSATVYHTLNKPSPNELGMRANEENDARYARLAVTNSFNSKQTIIANGEQLTLKSPVSGDSAYSAIVGRDASNEKTWAIGNLIRGNLDVQIESKQGSILTLGTVASFNRSLSITGQVQPSDFSNLDARYFTQTAANQRFAQLAANNAFSGENTFGKPISVKVNKAAIMLQNKDVGEELFILAKDSEYNNLWFIGKGDTSSDITFYDYKGNTSIILNSSGVAFNKNVRITGQVQPSDWTNIDSRYIPAATLSNLAKLNVSNTFTNVQTIVSDNEGLVLRSLTQGQPQYIRGVDTANVSRWWLGVGTANSNVVTLSNSFSGTQISLEPTLVSMNKNLYINGQVQPQDWANLDNRYFVKTKLLDQSLMTVTVNNLEDHSAFNIGYSGFVRNNGVTDGLRDLAIHVAHSSKTAAHSRGISFLYGSLGLAAFTYAYDDKGEYAGEAQFYTTDFKPTPSDIGAYTKAETDQKIAQAISDSTDLNKIYPVGIVTWFNSNVDPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVALAVGNLPSHTHSFSATTSSFDYGTKGTNSTGGHSHYGSGSTSTNGEHTHYIEAWNGTGVGGNRTSSYAVAYRSGGHETYASGNHSHSFSFWTSGAGDHSHSVGIGAHSHTVSGDTGGTGSGSAFSVTNQFYKLMAWVRTA
Physico‐chemical
properties
protein length:785 AA
molecular weight: 84557,39350 Da
isoelectric point:6,35081
aromaticity:0,09299
hydropathy:-0,32917

Domains

Domains [InterPro]
IPR048388
161–248
IPR048388 G3DSA:6.20.80.10 G3DSA:6.20.80.10 IPR005003 IPR005003 IPR005003 IPR005003 IPR005003
IPR048388
278–363
IPR048388 IPR048388
URO83535.1
1 785
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC106
[NCBI] 		2936908 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URO83535.1 [NCBI]
Genbank nucleotide accession
ON210138.1 [NCBI]
CDS location
range 43797 -> 46154
strand -
CDS
ATGGCAGATTACAAGTTGAGTGAATTAAACTCAATCGATACAATCCGTTCAGATGACCTTCTTCATGTCAGAGTTAAAAAGAGACCTGAAATGCTGGGTGATGAAGACCGTCGAATGACCTATCAAGACTTCTTAGCATCTTTTAAACTAGAAAGATTTGTTCAGATTGCTGGCAGCACTATGACGGGTGACTTAGGAATTGTTAAGTTACTTTATGGTGGTAAGGCAGTCTTTGACCCAACAGGCTCTTCTGAGATTACTATTGGGGATGTTTTAAAGACTTTTAAAATCAACGCAAATGGCCTTAAACTAACTATTGCAGATGCTTCAAGGTCGGCAACTGTTTATCATACTCTGAATAAACCAAGCCCTAATGAACTTGGGATGAGAGCTAATGAAGAGAATGATGCAAGGTATGCAAGGCTTGCTGTTACAAACTCATTCAATTCTAAACAGACTATCATCGCAAATGGGGAACAGTTAACATTAAAATCTCCTGTGAGTGGGGATAGCGCATACTCTGCTATTGTAGGTAGGGACGCAAGTAATGAAAAAACTTGGGCTATTGGGAACCTGATTAGGGGTAATCTTGATGTTCAAATCGAGAGTAAACAAGGTTCCATCCTCACTCTAGGCACGGTTGCTTCTTTTAATAGGTCTTTATCAATCACTGGTCAAGTTCAGCCGTCTGACTTCTCTAACTTAGATGCTAGATATTTTACTCAGACAGCAGCTAATCAGAGATTTGCACAGTTAGCTGCTAATAATGCTTTTAGCGGTGAAAATACATTCGGTAAACCTATTTCCGTAAAAGTTAATAAAGCTGCTATCATGTTACAGAATAAAGATGTAGGTGAGGAGTTATTCATCCTAGCAAAAGATAGCGAGTACAATAATTTATGGTTTATTGGTAAAGGTGATACAAGCTCTGATATCACATTTTACGATTACAAGGGCAATACCTCTATTATCTTAAACTCGTCTGGCGTAGCATTTAATAAGAATGTAAGAATCACTGGTCAAGTTCAACCTTCTGATTGGACTAACATTGACTCTAGATACATTCCGGCAGCTACTTTGAGTAATCTTGCTAAACTTAATGTATCTAATACTTTCACAAATGTGCAAACTATTGTGTCTGACAACGAGGGTTTGGTATTAAGGAGCTTAACACAGGGACAGCCACAATATATCCGTGGTGTTGATACTGCGAATGTATCTAGGTGGTGGCTGGGCGTAGGAACTGCTAATTCTAACGTGGTAACCTTGAGCAACAGCTTTTCAGGCACTCAAATTTCCCTAGAGCCAACATTGGTTAGTATGAATAAGAACCTGTATATTAATGGGCAGGTTCAACCACAAGATTGGGCTAACTTAGATAATAGATATTTTGTTAAGACTAAGCTATTAGACCAATCCTTAATGACTGTAACTGTAAATAACCTTGAAGACCATTCAGCATTTAATATTGGGTACTCAGGTTTTGTCAGAAATAATGGTGTTACTGACGGCTTAAGAGATTTAGCAATTCATGTTGCGCACTCTAGTAAGACTGCTGCACATTCAAGGGGCATCTCTTTTTTGTACGGCTCATTGGGCTTAGCAGCATTCACCTATGCCTATGATGACAAGGGTGAATACGCTGGAGAAGCACAGTTTTATACAACTGATTTTAAACCAACCCCTTCAGATATCGGCGCATATACTAAAGCTGAAACTGACCAGAAGATTGCACAGGCAATTAGTGACTCTACAGACCTTAACAAAATCTATCCAGTAGGTATTGTAACGTGGTTTAACAGTAATGTTGACCCTAATACAGCACTTCCTGGTCTAACTTGGACGTACCTGAACAATGGTGTTGGCAGAACTATTAGAATTGCAGCAGCAAATGGTTCAGATGTTGCTACAACTGGTGGTTCAGATTCTGTGGCGTTAGCTGTTGGTAATTTACCTTCACACACTCATAGTTTCTCTGCTACCACTTCATCTTTTGATTATGGTACGAAGGGAACTAACAGTACTGGTGGTCATTCTCACTATGGTAGTGGTTCTACTAGCACAAATGGTGAGCACACCCACTACATTGAGGCGTGGAACGGTACTGGTGTAGGTGGTAATAGAACATCATCATATGCAGTAGCATATAGGTCTGGTGGTCATGAAACTTATGCGTCAGGGAACCACAGTCATTCTTTCTCTTTTTGGACTAGCGGTGCTGGCGACCATTCCCACTCTGTAGGTATTGGTGCTCACAGTCATACGGTTAGTGGTGACACTGGTGGTACAGGTTCTGGTTCAGCATTTAGTGTTACTAACCAGTTCTACAAGTTAATGGCTTGGGTAAGAACTGCTTAA

Tertiary structure

PDB ID
287818386159fad969e78d124b819c39bddb55c2984025425a7df4d93c4a1b69
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6845
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of 17 Escherichia coli bacteriophages isolated from wastewater, pond water, cow manure and bird feces Vitt,A.R., Ahern,S.J., Gambino,M., Holst Sorensen,M.C. and Brondsted,L. 2022-10-20 — GenBank