Protein

View in Explore
Genbank accession
ALO80258.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,85
Seq2Symm
C3 confidence 0,979
C3 0,979
C1 0,912
D3 0,001
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MPKTKIKKRHLELPLLPEDSGVDSSFILDAIDGEIGTSWKERDSALEVKNKLESIVTESDKLDASAIKNLPSSDVVSVNGETGVVVLNADDIDDSSTGNKFVDSTEKSKLANIPSDQTALNDDIELRVSINDAKISYPGDQDISGIGVNSSRIDSLDQDKITQDAAIAANTAKISYPGDQDISGIGVNASAITALDNNKLEAGDFKTINNESIVGSGNISISGGSGGDEYNNIYRDSTDSGLVGNVDGTNTSFTVSNGSYNPATLNVFVEGQLFTAGHGITETSPGTGVFTFENAPRVGTNLYVTYQVGNLTTDILDGSIIESKLSSDVITKFGNVPNGYISPRTYGAIMDGVTDDRTAFMSTLSAANTLGKRIYIDSDMFLDVEELATKSIFIPDNIWIEGRDKDVNIIYNNKYSPAFVIALSDNITFKNFTFLYDQTIDATVTSNESVQNAANITQYKNYLTNEKGITFTSSNPIWRGPTLYMSTLLIAGGKYITIDNVKFKARGENAPNFIPWAIKFKEEHSKNITVTNDVEAETTIPQHITFKDVVLDGTIMGVQGIVRNFNCDGLKSYRYSDMQSLDGSNVGGVGYWMAPPHLFYINSDNALVYNPGEVKLTNTIDYGEYVGTPNVRPTISGYCNSLKMVTANDNNLVDGYITYRRDGFADFGDLTNVTIKNVYAECKSDIFDSTFKFTPLRFVGDIDGCVFENIEIRDISDVAHVYPVYFATGNNTIYNNMHLFVNGLDVGGVGFFGISGSNNKILNSSLNIKNHTSTSEFIGVIYHNSTARSTGSNNYYNVLVNGWRKFGSNVGALKSRTLFAAIENPNNNYAKLTDTNNNWVSEQINEMERNTWTRSEIVDITANTEQALTLDIPSGYAVKKIETLIIEAFDAGTTVSIGTLSGSANNLIPSMSTSVGNRTTVDINEEYNSTAYRQIFVRTSTGTFNSLGEFKITLTLTRTVTN
Physico‐chemical
properties
protein length:962 AA
molecular weight: 104832,04730 Da
isoelectric point:4,63354
aromaticity:0,09044
hydropathy:-0,26819

Domains

View on InterPro
Domain architecture
ALO80258.1
1 962 aa
STR 331–593 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
ALO80258.1
1 962 aa
Domain Start End Length (AA) Confidence
N-terminal 1 356 356 0,9947
Central domain 357 839 484 0,9823
C-terminal 840 962 122 0,9806
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Cellulophaga phage phi4:1_18 [NCBI] · taxon 1747285
Uroviricota Caudoviricetes Lightbulbvirus
Host
Cellulophaga baltica [NCBI] · taxon 76594
cellular organisms Bacteria Pseudomonadati FCB group Bacteroidota/Chlorobiota group Bacteroidota

Coding sequence (CDS)

Genbank protein accession
ALO80258.1 [NCBI]
Genbank nucleotide accession
KT962246 [NCBI]
CDS location
range 64976 -> 67864
strand -
CDS
ATGCCTAAAACTAAAATTAAAAAAAGACATTTAGAATTACCTTTACTTCCAGAAGACTCAGGAGTAGATTCTTCTTTTATACTGGATGCTATTGATGGAGAGATAGGTACCAGTTGGAAAGAAAGAGACTCGGCTTTAGAGGTAAAGAACAAACTAGAGTCTATAGTAACTGAGTCTGACAAGCTAGATGCCTCAGCAATAAAAAACTTACCTTCAAGTGATGTAGTGTCTGTTAATGGAGAAACTGGAGTTGTAGTTTTAAATGCAGATGATATTGACGATTCTAGTACAGGAAACAAGTTTGTAGATTCAACTGAAAAAAGTAAGCTAGCAAATATTCCTAGTGATCAAACTGCATTAAATGATGACATAGAATTAAGAGTATCTATAAATGATGCAAAAATATCTTATCCAGGTGACCAAGATATCTCAGGAATTGGGGTTAACTCAAGCAGAATAGACTCTTTAGATCAAGATAAAATAACACAAGATGCTGCCATAGCAGCAAACACAGCAAAAATATCTTATCCAGGTGACCAAGATATCTCAGGAATAGGAGTTAATGCTTCTGCTATTACAGCTTTAGATAATAATAAGTTAGAAGCTGGAGACTTTAAAACTATAAATAATGAATCTATAGTAGGCTCTGGAAATATAAGTATTTCAGGAGGAAGTGGAGGAGATGAGTATAATAATATTTATAGAGATTCCACTGATTCAGGGTTAGTAGGAAATGTAGATGGTACTAACACTTCTTTCACAGTATCTAATGGTTCATACAACCCTGCAACTTTAAACGTATTTGTTGAAGGTCAACTGTTCACAGCAGGTCATGGTATAACTGAAACTTCTCCTGGAACTGGAGTTTTTACATTTGAAAATGCACCTAGGGTAGGGACTAATTTATACGTAACATACCAAGTAGGTAATTTAACTACTGATATTTTAGATGGTTCTATTATTGAAAGTAAATTATCGTCTGACGTAATAACTAAATTTGGAAATGTTCCAAATGGTTATATTTCTCCTCGTACATATGGTGCAATAATGGATGGTGTAACAGATGACAGAACAGCTTTTATGTCTACGTTATCTGCTGCAAATACCTTGGGTAAACGTATTTACATTGATTCCGATATGTTTTTAGATGTAGAAGAGTTAGCAACTAAGAGTATATTCATACCAGATAATATTTGGATTGAAGGTAGAGATAAAGATGTTAATATAATATACAACAATAAATATTCTCCTGCATTTGTAATAGCATTGTCTGATAATATTACATTTAAGAATTTTACATTTTTATATGATCAAACAATTGATGCAACAGTAACATCTAATGAATCTGTACAGAATGCTGCAAATATAACTCAATACAAGAATTATTTAACTAATGAAAAAGGAATAACATTTACATCAAGTAATCCTATATGGAGAGGACCGACTTTGTATATGTCTACACTACTTATTGCAGGTGGTAAATACATAACAATAGATAATGTAAAGTTTAAAGCTAGAGGTGAGAATGCTCCTAATTTTATTCCTTGGGCTATTAAATTCAAAGAGGAACACTCTAAAAATATAACAGTTACTAATGATGTAGAAGCAGAAACAACAATACCTCAACACATAACATTTAAAGATGTTGTTTTAGATGGTACAATAATGGGTGTCCAAGGTATTGTAAGGAACTTTAATTGTGATGGATTAAAATCTTATCGTTATTCTGATATGCAGAGTTTAGACGGTAGTAATGTAGGGGGTGTAGGTTATTGGATGGCACCACCACACTTATTTTATATAAATTCAGATAATGCTTTAGTTTATAATCCAGGAGAAGTTAAACTAACTAATACTATTGATTATGGTGAGTATGTAGGAACACCTAATGTTAGACCTACAATTAGTGGTTATTGTAACTCTTTAAAAATGGTAACTGCAAATGATAATAATTTAGTTGATGGTTATATCACTTACAGAAGAGATGGTTTCGCTGATTTTGGAGACTTAACAAATGTTACAATAAAGAATGTTTATGCAGAATGTAAAAGTGATATTTTTGATTCAACATTTAAGTTCACACCTCTTAGATTTGTAGGTGATATAGATGGTTGTGTATTTGAAAATATAGAGATTAGAGATATTTCAGATGTTGCCCATGTGTATCCTGTATATTTTGCTACTGGGAACAACACTATTTATAATAATATGCATCTATTTGTTAATGGTTTGGACGTTGGAGGTGTAGGCTTTTTCGGAATCTCAGGAAGCAATAACAAAATATTAAACTCTAGTTTAAACATTAAAAATCATACATCTACTTCTGAATTTATTGGGGTAATTTATCATAATTCTACAGCAAGATCAACAGGGTCAAATAATTATTATAATGTTTTAGTTAATGGTTGGAGAAAGTTTGGTAGTAATGTAGGGGCATTGAAAAGTAGAACTTTATTTGCTGCAATAGAGAATCCTAATAATAACTATGCAAAACTTACGGACACAAACAACAATTGGGTTTCTGAGCAGATAAATGAAATGGAGAGGAATACATGGACTAGGAGTGAAATAGTAGACATAACAGCAAATACAGAACAAGCTCTAACCTTAGACATTCCTTCAGGTTATGCCGTTAAAAAAATAGAGACCTTAATCATAGAAGCTTTTGACGCAGGGACTACGGTTTCTATAGGCACTTTATCAGGTTCTGCAAATAATTTAATACCTTCTATGTCAACAAGTGTAGGCAATAGAACAACTGTTGATATTAATGAAGAGTACAATAGTACAGCGTACAGACAAATATTTGTAAGAACAAGTACTGGAACATTTAATTCTTTAGGGGAATTTAAAATTACATTAACATTGACTAGAACGGTTACAAACTAA

Genome Context

Tertiary structure

ALO80258.1
ESMFold structure
Source ESMFold
pLDDT 64.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Large-scale maps of variable infection efficiencies in aquatic Bacteriodetes phage-host model systems Holmfeldt,K., Solonenko,N., Howard-Varona,C., Moreno,M., Malmstrom,R.R., Blow,M.J. and Sullivan,M.B. 2016-06-27 27235779 GenBank