Protein

View in Explore
Genbank accession
AFO71364.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,30
Seq2Symm
C1 confidence 0,999
C1 0,999
C2 0,006
C3 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAFEPDLVTAVIRSLNRKNLVPSARAANPNDVRLVSVVVRDERTLDVTVEGKSNKPTYGRITAQVFRQNIADYFAKITLTAIPTVTSVHKLLPELATLVGLSFLPEDFEDLPIVWVDNKAKVTFQSKPGSYFWYGSITLDVENGDVDINTVYTYSNYNPTAKTLNKQQWVDNYSALCKRTLDLNKVEVSLPQKPSDLGISSAYNTIVTLTAKPNSGLFGVKYVHFTRINLASFEGQTTAVPDDFTGDLYDALATENIGFRTYLDVNEVERCPLDTSSWPIDVQLKAKPDSYRAVGVANIKVGRYADDTKSITIDFNSNNIAMTATTIADICRARVAKAAQVNLTINVAAGVYLVGAKVTDYALTIPYMSQYANVNVVLNNRGFITGRGAQGSDTGWPNAAGNGLFIDPKFKGSVAINNLGTIAGGGGGGGMSSALNYVGGGGGQPLGAASNTKDSGNFYAGPAATLTAPGASREVWRSDTLYYFGGAGGGLGQPGKIPGQRNGNPPYYAVNQTTAPGDPGKSVVDTANIATWITAGIVMPPVVDQQELLNQWLDVQDARVVSDTTELDLLEADGKFIVQLDSKTNFYTDRDGWTLASKLQCYGQVWGQPVGRVFYSRIPGMLQLGMENENVFYYNYRKNNRVYFEFESTPTRVATTGIYRNFTQGQALTTAQEQVRLKRIVYYDPWRGYVVDVNPYLKTIERFTGFVSDLSKAQDTLDGFKK
Physico‐chemical
properties
protein length:722 AA
molecular weight: 78780,69010 Da
isoelectric point:6,31125
aromaticity:0,10388
hydropathy:-0,22978

Domains

View on InterPro
Domain architecture
AFO71364.1
1 722 aa
STR 25–153 · STR 181–303 · RBD 311–540 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Cronobacter phage CR5 [NCBI] · taxon 1195085
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Cronobacter sakazakii [NCBI] · taxon 28141
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
AFO71364.1 [NCBI]
Genbank nucleotide accession
JX094500.1 [NCBI]
CDS location
range 124069 -> 126237
strand +
CDS
ATGGCATTTGAACCTGATTTAGTAACGGCCGTTATACGGTCGCTAAACCGGAAAAATTTAGTCCCCTCCGCTAGGGCCGCTAATCCGAATGATGTGCGGCTGGTATCGGTTGTTGTCCGTGATGAACGTACACTCGATGTTACGGTGGAAGGCAAGTCAAATAAACCCACTTACGGCCGAATTACGGCACAAGTGTTTCGCCAAAACATTGCCGACTATTTTGCGAAGATAACGCTAACGGCCATCCCGACAGTTACGAGCGTGCATAAACTGCTGCCCGAGTTGGCGACGTTGGTGGGGTTGAGTTTTTTGCCTGAGGACTTTGAAGACTTGCCAATCGTTTGGGTCGACAACAAAGCCAAAGTAACTTTCCAGTCAAAGCCGGGGAGTTATTTTTGGTACGGGTCTATAACACTGGATGTGGAAAACGGCGATGTGGATATCAACACCGTGTACACGTACAGCAACTATAACCCGACGGCAAAAACCCTGAACAAACAGCAGTGGGTTGATAACTACTCCGCGTTATGCAAACGAACACTCGATCTCAACAAAGTGGAAGTGAGTTTACCGCAGAAGCCGTCAGACCTCGGCATCAGTTCGGCGTATAACACCATTGTGACGTTAACTGCGAAACCGAACTCCGGACTGTTTGGTGTAAAATACGTACATTTCACCCGTATCAACCTTGCCAGCTTTGAAGGCCAAACAACCGCGGTTCCTGATGATTTCACAGGTGACCTGTACGATGCATTAGCGACCGAAAATATTGGCTTTCGAACGTATCTTGATGTTAACGAGGTTGAGCGGTGCCCACTGGATACCAGTAGCTGGCCTATTGACGTTCAGTTGAAAGCGAAACCCGACTCTTACAGAGCGGTCGGTGTCGCGAATATCAAAGTCGGGCGTTATGCGGACGATACAAAATCTATCACGATAGACTTCAATAGCAACAACATCGCAATGACGGCAACAACCATTGCTGACATTTGTAGGGCACGGGTAGCTAAGGCCGCGCAAGTTAATTTAACGATTAACGTCGCGGCGGGTGTTTACCTGGTTGGTGCAAAAGTCACCGATTACGCGTTAACTATCCCGTATATGTCCCAGTATGCCAACGTAAATGTTGTGCTCAACAACCGAGGTTTCATTACAGGACGCGGTGCGCAGGGTTCGGATACGGGCTGGCCAAACGCCGCAGGTAACGGATTATTTATCGATCCTAAATTTAAAGGCAGTGTGGCCATCAATAATCTCGGGACAATCGCCGGTGGTGGTGGCGGTGGTGGGATGTCGTCGGCATTGAATTACGTCGGTGGTGGTGGCGGACAACCTTTAGGGGCAGCCAGCAATACTAAAGATTCTGGTAACTTCTATGCTGGTCCTGCGGCGACCCTGACTGCCCCAGGCGCGAGTCGTGAAGTCTGGAGGTCAGATACACTCTACTATTTCGGTGGGGCAGGCGGTGGGCTTGGGCAGCCCGGTAAGATTCCCGGGCAGCGTAACGGAAACCCGCCTTATTACGCCGTGAATCAAACCACAGCGCCCGGCGACCCTGGGAAGTCAGTTGTCGATACGGCAAATATCGCGACTTGGATTACGGCCGGCATCGTTATGCCGCCTGTGGTTGATCAGCAGGAGTTGCTTAATCAGTGGTTGGATGTTCAAGATGCGAGGGTCGTTAGCGACACCACGGAATTGGATTTACTCGAAGCTGACGGTAAATTTATTGTTCAGTTAGATAGTAAAACCAATTTCTATACCGATCGCGACGGTTGGACTTTAGCGTCTAAGTTGCAGTGTTACGGACAAGTGTGGGGTCAACCGGTCGGTAGAGTATTCTACTCGCGTATTCCGGGCATGCTTCAGCTCGGTATGGAAAATGAAAACGTTTTCTATTACAACTACCGAAAAAACAACCGGGTGTATTTCGAGTTTGAATCAACTCCTACACGGGTCGCGACTACGGGCATTTATCGTAACTTCACCCAAGGTCAGGCGTTGACTACTGCGCAAGAGCAAGTGCGGTTAAAACGCATTGTATATTACGACCCATGGCGCGGTTATGTGGTTGATGTAAACCCATATCTGAAAACCATAGAACGCTTCACTGGGTTCGTGTCCGATCTGTCGAAAGCCCAAGATACACTAGACGGGTTTAAAAAGTAA

Genome Context

Tertiary structure

AFO71364.1
ColabFold structure
Source ColabFold
pLDDT 72.3
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A Novel Bacteriophage Targeting Cronobacter sakazakii Is a Potential Biocontrol Agent in Foods Lee,J.H., Bai,J., Shin,H., Kim,Y., Park,B., Heu,S. and Ryu,S. 2016 26497465 GenBank
Complete Genome Sequence of Cronobacter sakazakii Bacteriophage CR5 Shin,H., Lee,J.-H., Kim,Y. and Ryu,S. 2012-06 — GenBank