Protein

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Genbank accession
XNL98004.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,52
Protein sequence
MALVSQSIKNLKGGISQQPEILRYPEQGSLQVNGWSSETEGLQKRPPMVFIKSLGPRGYLGEDPYVHLINRDEYEQYYAVFTGNDVRVFDLSGYEYQVRGDRSYVTVNNPKDNLRMVTVADYTFIVNRTRQVRESPLQTNGGVFMDNVDGIINVRGGQYGRKLEVNINGVWVSHQLPPGDNAKDDPPKVDAQAIAEALAVLLRAAHPTWTFDVGTGYIHCVAPANTTLDVFETKDGYADQLISPVTHYVQSFSKLPLNAPDGYMVKIVGDTSKTADQYYVKYDKSQKVWKETVGWNISIGLEYHTMPWTLVRAADGNFDLGYHEWTNRRAGDEDTNPQPSFVNSTITDVFFFRNRLGFISGENIVMSRTSKYFEFYPPSVANYTDDDPLDVAVSHNRVSVLKYAVSFAEELLLWSDEAQFVLSANGVLSAKTAQLDLTTQFDVSDRARPYGIGRNIYYASPRSSFTSIMRYYAVQDVSSVKNAEDMTAHVPNYIPNGVYSINGSGTENFACVLTKGAPSKVFIYKFLYMDENIRQQSWSHWDFGDGVEVMAANCINSTMYLLMRNAYNVWIAAVDFKKESTDFPFEPYRFHVDAKRSYHISETAYDIETNQTVVNVKDIYGASFSKGTVAICESDGKITEYEPMGDSWNSTPDIRISGDISGKDIVIGFLYDFQYVFSRFLIKQEQNDGTTSTEDSGRLQLRRAWVNYQNTGAFTVSVDNGSREFNYLVNARVGSTGLRLGQKATTTGQYRFPVTGNALYQKVSLSSFNASPVSIIGCGWEGNYSRRANGI
Physico‐chemical
properties
protein length:791 AA
molecular weight: 88842,12860 Da
isoelectric point:5,42269
aromaticity:0,12389
hydropathy:-0,38142

Domains

Domains [InterPro]
IPR058003
TTP
1–791
IPR058003
XNL98004.1
1 791
Architecture
TTP
TTP 1-791
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNL98004.1
1 791
Domain Start End Length (AA) Confidence
N-terminal 1 590 590 0,9115
Central domain 591 780 191 0,2571
C-terminal 781 791 10 0,9614
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-590
Central
591-780
C-terminal
781-791

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage RAD13
[NCBI] 		3389929 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae ATCC 43816
[NCBI] 		1316582 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella > Klebsiella pneumoniae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNL98004.1 [NCBI]
Genbank nucleotide accession
PQ803403 [NCBI]
CDS location
range 14545 -> 16920
strand +
CDS
ATGGCTCTCGTATCACAATCAATCAAGAACCTCAAGGGAGGCATTAGCCAGCAGCCTGAAATCCTACGGTACCCAGAGCAGGGTTCACTTCAGGTCAACGGTTGGTCCTCCGAGACCGAGGGTCTCCAGAAGCGACCACCTATGGTGTTCATCAAGTCACTTGGCCCTCGGGGCTACTTGGGGGAAGACCCTTACGTCCACCTCATCAACCGTGATGAGTACGAGCAGTATTACGCTGTGTTCACTGGGAATGACGTAAGGGTGTTCGACCTGTCCGGCTATGAGTATCAGGTCCGAGGAGACCGCTCATATGTGACCGTCAATAACCCTAAGGATAACTTGCGGATGGTCACCGTGGCCGACTACACGTTCATCGTCAACAGGACCAGACAGGTGCGGGAAAGTCCACTCCAAACTAACGGAGGGGTGTTCATGGATAACGTGGACGGCATCATTAACGTTCGTGGTGGGCAGTATGGGCGCAAGCTCGAAGTGAACATTAATGGTGTGTGGGTTAGCCACCAGCTGCCTCCGGGCGACAACGCTAAGGATGACCCACCGAAGGTTGACGCTCAGGCCATCGCCGAGGCTCTCGCAGTCCTTCTCCGAGCGGCCCACCCTACGTGGACATTTGACGTTGGAACAGGGTACATTCACTGCGTTGCTCCAGCTAACACCACTCTGGATGTGTTCGAAACGAAGGATGGCTACGCCGACCAGTTAATAAGCCCGGTGACCCATTACGTCCAGAGCTTCTCTAAGTTGCCTCTGAACGCCCCAGACGGGTACATGGTGAAGATTGTTGGGGACACCTCCAAGACGGCTGACCAGTATTACGTCAAGTACGACAAGAGTCAGAAGGTATGGAAGGAAACTGTCGGTTGGAACATCTCGATAGGCTTAGAGTACCACACAATGCCTTGGACTCTTGTCCGGGCAGCTGATGGCAACTTTGACCTAGGCTATCACGAGTGGACCAACCGTCGGGCTGGCGATGAGGACACAAACCCTCAACCGTCCTTTGTTAACTCCACGATAACCGATGTGTTCTTCTTCAGGAACCGCTTAGGGTTCATCTCTGGGGAGAACATTGTGATGTCCCGTACCAGTAAATACTTCGAGTTCTACCCACCGTCAGTGGCCAACTACACAGACGATGACCCGTTGGATGTTGCTGTGAGCCATAACCGAGTGTCGGTCCTGAAGTACGCTGTGAGCTTCGCTGAGGAGCTTCTGCTGTGGTCTGATGAGGCACAGTTCGTCCTGTCGGCAAACGGTGTGTTATCCGCTAAGACTGCACAGCTGGACCTGACCACTCAGTTCGATGTGTCGGACCGAGCGCGTCCGTATGGTATCGGCAGGAACATCTACTACGCGTCCCCTCGCAGCTCCTTTACGTCCATCATGCGTTACTACGCGGTACAGGATGTAAGTTCTGTGAAGAACGCAGAGGACATGACAGCCCACGTCCCGAACTACATCCCGAACGGTGTGTACAGCATCAATGGGTCTGGTACGGAGAACTTCGCCTGTGTGCTGACCAAGGGTGCTCCCAGCAAGGTGTTCATCTACAAGTTCCTCTACATGGACGAGAACATCCGGCAGCAGTCGTGGTCCCACTGGGACTTCGGGGACGGTGTGGAGGTGATGGCGGCAAACTGTATCAACTCAACGATGTACCTGCTGATGCGGAACGCCTACAACGTGTGGATAGCTGCTGTGGACTTTAAGAAGGAGTCGACCGACTTCCCGTTCGAGCCTTACAGGTTCCACGTGGACGCCAAGCGGTCGTACCACATCTCAGAGACTGCGTATGACATCGAGACCAACCAGACGGTAGTTAACGTCAAGGATATCTATGGCGCGTCGTTCTCTAAGGGTACGGTGGCAATCTGCGAGAGTGACGGTAAAATTACCGAGTATGAGCCCATGGGCGACTCTTGGAACTCAACCCCAGACATCCGTATTAGCGGTGACATCTCCGGTAAGGATATCGTCATTGGGTTCCTGTACGACTTCCAGTATGTATTCAGTCGGTTCCTCATCAAGCAGGAGCAGAATGACGGCACAACGTCCACTGAGGACTCCGGTCGTCTACAGCTGCGCAGAGCGTGGGTGAACTATCAGAACACCGGAGCGTTCACTGTGAGCGTCGACAACGGTAGCCGCGAGTTCAACTATCTGGTCAACGCCAGAGTGGGTTCTACGGGCCTACGTCTGGGCCAGAAGGCTACAACTACTGGTCAATACCGCTTCCCGGTGACAGGCAACGCATTGTACCAGAAGGTGTCTCTGAGTTCCTTCAACGCTTCCCCGGTGTCAATCATCGGGTGTGGTTGGGAGGGTAACTACAGCAGGCGCGCCAACGGCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c166b3740a9b05809f0071bf0afa6c833cfa159f922e4d32dd160e5f5dfd9933
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3108
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50