Phage RBP Database

UniProt accession

A0A513ZYB1 [UniProt]

Protein name

Tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,99

Protein sequence

MADIELKYLQDLEAASKVSSGDLMHLSQSSLDKSVTIGVLTAYFMDLFTPVGTVMFRGDAANPNQLFPGTTWVKLPANQVIRTSAENASDVLTTGGADSVSLNNDHLPSHSHTFSNGSTSQSGNHSHRVWTGAAGGHAHSAYTDAQGNHAHRAWTDAQGAHSHPFLGAGGTGSGSGLLIGVKEFEIGAGSAIHNAGLHSHNVGMDAAGNHGHNITVNAVGAHDHAAAMDPAGNHTHTVTGTIGLTGSNSPFSVVNAHVKLVGWRRTK

Physico‐chemical properties

protein length:	267 AA
molecular weight:	27609,99240 Da
isoelectric point:	6,39776
aromaticity:	0,05618
hydropathy:	-0,24831

Domain architecture

A0A513ZYB1

1 267 aa

ATT 45–142 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR053827
ATT

IPR053827

A0A513ZYB1

1267 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0033
STR

DC_0033 DC_0348

A0A513ZYB1

1267 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053827	ATT	DC_0313	45	142	InterPro cluster	Baseplate structural protein Gp10, C-terminal domain	C-terminal	Medium	Text match	489 proteins / 489 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

A0A513ZYB1

1 267 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	47	47	0,9886
Central domain	48	246	200	0,0026
C-terminal	247	267	20	0,9977

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Pantoea phage vB_PagM_AAM37 [NCBI] · taxon 2588093

Uroviricota Caudoviricetes Dibbivirus

Host

Pantoea agglomerans [NCBI] · taxon 549

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

QDH45699.1 [NCBI]

Genbank nucleotide accession

MK798143 [NCBI]

CDS location

range 22350 -> 23153
strand +

CDS

ATGGCAGACATCGAATTAAAGTACCTACAGGATCTTGAAGCGGCGAGCAAAGTAAGCAGCGGCGACCTTATGCACCTAAGCCAATCATCTCTCGATAAGTCGGTTACCATTGGCGTGCTGACGGCGTACTTCATGGATCTGTTTACCCCAGTAGGGACAGTAATGTTCCGAGGCGACGCGGCCAACCCTAACCAGTTATTTCCTGGCACTACCTGGGTTAAGCTACCAGCAAATCAGGTAATCCGGACTTCGGCTGAAAACGCGTCGGACGTATTGACAACAGGCGGCGCTGATAGCGTATCACTGAATAACGATCACCTGCCGTCACACAGCCACACGTTCAGCAACGGCTCTACAAGCCAGAGCGGAAACCACTCTCACCGCGTATGGACTGGAGCCGCTGGGGGGCATGCGCACTCAGCGTATACTGACGCGCAGGGCAACCACGCGCACCGGGCATGGACGGATGCTCAGGGTGCTCACTCGCATCCATTTCTTGGCGCTGGCGGTACTGGATCAGGTAGCGGTCTTCTTATCGGTGTTAAGGAGTTTGAAATTGGTGCCGGATCTGCGATTCACAATGCGGGGCTTCACTCTCACAACGTCGGAATGGATGCAGCCGGTAACCACGGCCATAACATCACCGTGAACGCAGTTGGCGCTCATGATCACGCCGCAGCGATGGACCCGGCAGGGAACCACACTCATACAGTAACCGGCACAATCGGTCTGACGGGCAGTAACAGCCCATTCTCAGTTGTTAACGCTCATGTTAAACTTGTCGGATGGCGACGAACCAAATAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)