Phage RBP Database

UniProt accession

A0A513ZYB1 [UniProt]

Protein name

Tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,99

Seq2Symm

C3 confidence 0,830

C3	0,830
C1	0,378
I	0,009

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MADIELKYLQDLEAASKVSSGDLMHLSQSSLDKSVTIGVLTAYFMDLFTPVGTVMFRGDAANPNQLFPGTTWVKLPANQVIRTSAENASDVLTTGGADSVSLNNDHLPSHSHTFSNGSTSQSGNHSHRVWTGAAGGHAHSAYTDAQGNHAHRAWTDAQGAHSHPFLGAGGTGSGSGLLIGVKEFEIGAGSAIHNAGLHSHNVGMDAAGNHGHNITVNAVGAHDHAAAMDPAGNHTHTVTGTIGLTGSNSPFSVVNAHVKLVGWRRTK

Physico‐chemical properties

protein length:	267 AA
molecular weight:	27609,99240 Da
isoelectric point:	6,39776
aromaticity:	0,05618
hydropathy:	-0,24831

Domain architecture

A0A513ZYB1

1 267 aa

ATT 45–142 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR053827
ATT

IPR053827

A0A513ZYB1

1267 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0033
STR

DC_0033 DC_0348

A0A513ZYB1

1267 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053827	ATT	DC_0313	45	142	InterPro cluster	Baseplate structural protein Gp10, C-terminal domain	C-terminal	Medium	Text match	489 proteins / 489 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

A0A513ZYB1

1 267 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	47	47	0,9886
Central domain	48	246	200	0,0026
C-terminal	247	267	20	0,9977

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Pantoea phage vB_PagM_AAM37 [NCBI] · taxon 2588093

Uroviricota Caudoviricetes Dibbivirus

Host

Pantoea agglomerans [NCBI] · taxon 549

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

QDH45699.1 [NCBI]

Genbank nucleotide accession

MK798143 [NCBI]

CDS location

range 22350 -> 23153
strand +

CDS

ATGGCAGACATCGAATTAAAGTACCTACAGGATCTTGAAGCGGCGAGCAAAGTAAGCAGCGGCGACCTTATGCACCTAAGCCAATCATCTCTCGATAAGTCGGTTACCATTGGCGTGCTGACGGCGTACTTCATGGATCTGTTTACCCCAGTAGGGACAGTAATGTTCCGAGGCGACGCGGCCAACCCTAACCAGTTATTTCCTGGCACTACCTGGGTTAAGCTACCAGCAAATCAGGTAATCCGGACTTCGGCTGAAAACGCGTCGGACGTATTGACAACAGGCGGCGCTGATAGCGTATCACTGAATAACGATCACCTGCCGTCACACAGCCACACGTTCAGCAACGGCTCTACAAGCCAGAGCGGAAACCACTCTCACCGCGTATGGACTGGAGCCGCTGGGGGGCATGCGCACTCAGCGTATACTGACGCGCAGGGCAACCACGCGCACCGGGCATGGACGGATGCTCAGGGTGCTCACTCGCATCCATTTCTTGGCGCTGGCGGTACTGGATCAGGTAGCGGTCTTCTTATCGGTGTTAAGGAGTTTGAAATTGGTGCCGGATCTGCGATTCACAATGCGGGGCTTCACTCTCACAACGTCGGAATGGATGCAGCCGGTAACCACGGCCATAACATCACCGTGAACGCAGTTGGCGCTCATGATCACGCCGCAGCGATGGACCCGGCAGGGAACCACACTCATACAGTAACCGGCACAATCGGTCTGACGGGCAGTAACAGCCCATTCTCAGTTGTTAACGCTCATGTTAAACTTGTCGGATGGCGACGAACCAAATAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)