Protein

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UniProt accession
X5L4N3 [UniProt]
Protein name
SGNH hydrolase-type esterase domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,60
TF
Evidence RBPdetect2
Probability 0,48
Seq2Symm
C3 confidence 0,739 truncated
C3 0,739
C1 0,030
C2 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MHAPFEEDIPMTTKVIFTFHNPDGSPQANEKFTVRLTRPGMSDAEHCVVIPETYEMVTDAKGEFTMDLESSTSAYRVTAIGDDDEYEDDPCSQYTFTFYVPDSADPVYVQELILMPPPTNLPWDEEAMNKITQAVVDAREARDEAEAQADRAEVQVDLAKAEVVKAQDEVVKAKAEVTKAQAEVTKAAQQVELAKVEVGKAEASAAAAKVSETNAANAAAGSAASATAATNQANRAKTEADRSKSEADRARDLADAMAEKVEGGSLPPLVGMNETFTYEGTDPYRWTVSGPATAVSDGSVMRLTKTDGSGSRAFVRQAVSFPDSHWIVYMRVKTQTGTASQNRSAQIRFIATDNKDCVVYFNVNANGLVEPNTIHMQGTEGGTRNAATMFTGLGTEDWLDLAVKYDAVNRHIELFRRMPNGTWQKGGGRLMVDAIKPAFIEISSMPVAPQNWWLDLDFISVCKPNLICYGDSIAAGQNEYGVTRGSNSYNNNRNWAGTWFGKVPLYATNRNNLVLVQGVEGRRTWQYLSQLSEISNSGVKVVFMHASTNDVNDATMTMEKRTSDTQAIIDQLHAVGAQVVLFNSMQGTKAYNDASSTTVKLRDYTDQWWNTELPKVNGLAQTLDIARLIAKDGYMDPALGASDGLHLTDASAQKIADKLGQFFSNSSDTNGFASLDSPAFTGIPTVPTQTPFLPFGKTIANTEYVVTFIQDWTQRYGYGDLTMDSRTGAQLSGAGVRSGYYHVPAGAGNPLPSGLNTVLAFVDHKSYDTNKGWQLWNPAYTGRLFIRTTNTSGVWQTPVELATFTWLDENNVTKPRTLKFMELPLFNPPGSPSLSGFVPIQDSADGGWRNLSTTPTGVALLGASSAGGALNYLGGMPIANQTLPSNSIDNAALNGFYSVPSGTAGLPLGMDTTNGHAGITSVFDNVTKYQLLFPRTGGAGSYATSVFYRARSNNGWESWVRLLASNQLEGSVTTEPLTTAIFQNNGNNNQNVGRSVRFADGTQIVYATIRLTYSAVDVLQYTYTYPMGFVAPPTITVQPILGARADINDMPYFAVTSPFTYNVGNGNALVQIYRVAGYTAHSFASTSFINCAVVAVGRWK
Physico‐chemical
properties
protein length:1100 AA
molecular weight: 119259,66770 Da
isoelectric point:5,05596
aromaticity:0,09455
hydropathy:-0,28918

Domains

View on InterPro
Domain architecture
X5L4N3
1 1100 aa
STR 459–668 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
X5L4N3
1 1100 aa
Domain Start End Length (AA) Confidence
N-terminal 1 266 266 0,9962
Central domain 267 513 248 0,5842
C-terminal 514 1100 586 0,6662
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pseudomonas phage vB_PaeP_C2-10_Ab09 [NCBI] · taxon 1476391
Uroviricota Caudoviricetes Schitoviridae Litunavirus Litunavirus Ab09
Host
Pseudomonas aeruginosa [NCBI] · taxon 287
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales

Coding sequence (CDS)

Genbank protein accession
CDN96861.1 [NCBI]
Genbank nucleotide accession
HG962375 [NCBI]
CDS location
range 29633 -> 32935
strand -
CDS
CTGCACGCTCCCTTCGAAGAGGATATACCCATGACTACCAAGGTGATCTTCACCTTCCATAACCCGGATGGCAGCCCACAGGCGAACGAGAAGTTCACCGTGCGACTGACCCGTCCTGGCATGAGCGATGCAGAGCACTGCGTCGTAATTCCCGAAACCTACGAGATGGTGACCGACGCCAAGGGCGAGTTCACCATGGACTTGGAATCGTCTACCTCTGCCTACCGCGTCACTGCTATAGGCGATGACGACGAGTACGAGGACGATCCCTGCTCGCAGTACACCTTCACCTTCTACGTGCCGGACTCTGCTGATCCGGTCTACGTGCAGGAACTGATCCTGATGCCCCCGCCCACGAATCTGCCGTGGGACGAGGAAGCCATGAACAAGATCACCCAGGCTGTCGTCGATGCCCGTGAGGCTCGTGACGAAGCTGAAGCTCAGGCTGACCGTGCTGAAGTGCAGGTAGATCTAGCCAAAGCCGAGGTCGTCAAAGCCCAGGATGAGGTCGTTAAAGCCAAAGCCGAGGTGACCAAGGCTCAGGCTGAAGTGACCAAAGCTGCTCAGCAAGTTGAGCTTGCGAAGGTCGAAGTGGGTAAGGCAGAAGCCTCTGCTGCTGCGGCCAAGGTCAGCGAGACCAATGCTGCGAATGCCGCTGCTGGTTCTGCCGCCTCGGCAACTGCTGCAACCAACCAAGCCAACCGTGCGAAGACGGAAGCTGACCGCTCCAAGAGCGAGGCTGACCGTGCACGGGATCTGGCTGACGCCATGGCTGAAAAGGTCGAGGGTGGTTCCCTGCCTCCGCTGGTAGGCATGAACGAAACCTTCACCTACGAAGGTACCGACCCCTACCGATGGACTGTATCTGGCCCTGCTACGGCTGTCTCGGACGGTAGCGTCATGCGCCTGACCAAGACCGATGGCAGCGGTTCCCGTGCGTTCGTACGACAGGCAGTGTCCTTCCCGGACAGCCACTGGATCGTCTACATGCGTGTGAAGACCCAGACCGGTACCGCCTCGCAGAACCGTTCTGCACAGATCCGCTTCATCGCTACTGACAACAAGGACTGCGTGGTCTACTTCAACGTCAATGCGAATGGCTTGGTGGAACCCAACACCATCCACATGCAAGGCACCGAGGGTGGTACCCGCAACGCTGCAACCATGTTCACTGGTTTGGGAACCGAAGACTGGCTAGACCTTGCTGTGAAGTACGATGCGGTAAACCGCCACATCGAACTCTTCCGCCGCATGCCCAATGGCACTTGGCAGAAGGGTGGTGGTCGTCTGATGGTAGATGCCATCAAGCCTGCTTTCATCGAGATCTCGTCCATGCCGGTAGCCCCGCAGAACTGGTGGCTGGATCTGGACTTCATCTCGGTGTGCAAGCCCAACCTCATCTGCTACGGCGACAGCATCGCCGCAGGCCAGAACGAGTACGGTGTGACTCGCGGGAGTAACTCCTACAACAACAATCGCAACTGGGCTGGTACTTGGTTTGGGAAGGTTCCGCTGTATGCCACGAACCGGAACAACCTCGTGCTTGTGCAGGGCGTGGAAGGTCGTCGTACTTGGCAGTACCTCAGCCAGCTGTCGGAGATCTCCAACTCTGGCGTCAAGGTAGTCTTCATGCATGCCAGCACGAATGACGTGAACGATGCCACCATGACTATGGAGAAGCGCACCTCTGACACCCAAGCCATCATCGACCAGCTTCATGCTGTCGGTGCCCAGGTGGTGCTGTTCAACTCCATGCAGGGCACGAAGGCGTACAACGATGCTTCGTCCACTACCGTCAAGCTACGGGACTACACCGACCAGTGGTGGAACACTGAACTGCCCAAGGTCAATGGTTTGGCCCAGACGCTGGACATTGCTCGACTCATCGCCAAGGACGGGTACATGGACCCTGCCCTCGGTGCGAGTGATGGCCTGCACCTGACCGATGCCTCGGCACAGAAGATCGCCGACAAGCTTGGCCAGTTCTTCTCCAACTCCAGCGATACCAATGGCTTCGCCTCGTTGGATAGCCCAGCCTTCACTGGTATCCCGACTGTTCCCACTCAGACTCCTTTCCTGCCGTTCGGCAAGACCATCGCCAATACCGAGTACGTGGTCACGTTCATTCAGGACTGGACCCAACGGTACGGCTACGGTGACCTCACCATGGACAGCCGTACGGGAGCACAGTTGTCCGGTGCCGGTGTACGGAGTGGCTACTACCACGTTCCCGCTGGTGCAGGTAACCCTTTGCCCTCTGGATTGAACACTGTTCTGGCTTTCGTGGACCACAAGTCCTACGACACCAACAAGGGCTGGCAGCTGTGGAACCCGGCCTACACTGGCCGTCTGTTCATCCGTACGACGAATACTTCGGGCGTCTGGCAGACTCCGGTAGAACTGGCTACCTTCACCTGGTTGGATGAGAACAACGTCACCAAGCCACGAACTCTAAAGTTCATGGAACTGCCGTTGTTCAACCCACCTGGTAGCCCATCTCTGTCTGGCTTCGTACCGATCCAGGACAGTGCAGATGGTGGCTGGCGTAACCTGTCTACCACTCCTACTGGTGTGGCTTTGCTGGGGGCTTCCTCGGCTGGTGGGGCGCTGAACTACCTGGGTGGTATGCCTATCGCAAACCAGACCCTTCCGAGCAACAGTATCGACAACGCAGCCCTCAACGGTTTCTACTCGGTACCGAGTGGTACTGCTGGTCTTCCGCTGGGCATGGATACCACGAACGGGCATGCTGGTATCACTTCGGTGTTCGACAATGTCACGAAGTATCAGCTGCTGTTCCCGCGTACTGGTGGTGCTGGTTCCTACGCTACCTCTGTGTTCTACCGTGCTCGGTCGAACAACGGTTGGGAAAGCTGGGTGCGGTTGTTGGCTTCTAACCAACTGGAGGGTTCGGTAACCACCGAACCTCTGACTACTGCTATCTTCCAGAACAACGGCAACAACAACCAGAACGTGGGCCGTTCTGTACGTTTCGCTGACGGTACTCAGATCGTCTACGCAACGATACGGCTCACCTACTCTGCGGTGGATGTGTTGCAGTACACCTACACCTACCCGATGGGGTTCGTAGCACCGCCTACTATCACTGTGCAGCCTATTCTTGGTGCTCGTGCTGATATCAACGATATGCCTTACTTCGCTGTGACCAGTCCGTTTACCTACAACGTGGGCAATGGAAATGCTCTCGTGCAGATCTACCGGGTTGCTGGGTATACTGCACACAGCTTTGCCAGTACTTCATTCATTAACTGCGCAGTAGTCGCAGTAGGACGGTGGAAATAA

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0004622 phosphatidylcholine lysophospholipase activity Molecular Function IEA:TreeGrafter (UniProt)

Tertiary structure

X5L4N3
ColabFold structure
Source ColabFold
pLDDT 73.9
Oligomeric state monomer
Download structure