Protein

View in Explore
Genbank accession
YP_009856533.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
Protein sequence
MKKILDSARSYLKTNSRIKTASLISLELPGSTGTSTAFIYLTDYFRDVLYNGILYQAGKVKSISTHKQNRDLSIGSLSFTITGTAQDEVLKLVQNGVSFLDRLVSIHQAIITEDGSILPVDPDTNGPLLYFRGRITGGGIKDNISTSGVGTSTITWNCSNQFYDFDRVNGRFTDDASHRGLEVVAGQLVPSNGAKRLEYQEDYGFFHANKSISILAKYQVQEERYKLKSKKKLFGLSRSYSLKKYYETVTKEVDIDFNLAAKYIPVVYGVQKIPGIPIFADTELHNPNIVYVVYAFAEGEIDGFLDFSFGDNPMICMDSNDSSARTCFGVKKVAGDTMQRIASGISSSSPSVHGQEYKYNDGNGDIRIWTYHGKADQTASEVLVNIAKERGFYLQNMNGNGPEYWDARYKLLDTAYAVVRFTINENRTEIPEVSAEIQGKKIKIYHSDGRVTANSTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLVQEAAILDIIDESYQVSWQPYWRYVGWTDPLAENRQIVQMNTILDTSESVFKNVQGLLESYGGAINNLSGQYRITVEKYSNTPLEINFLDTYGDLELSDTTGRNKFNSVQASIVDPALSWKTNAITFYNSKYKEQDKNLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLSFSLPYQFIGIEPNDAIAFTYDRYGWDKKYFLVDEVENSREGKINVTLQEYGEDVFINSDQVDNSGNDIPDISNNVLPPRDFKYTPTPGGLVGSIGKNGELSWLPSLTNNVVYYSIVHSGHAEPYIVQQLETNPNERMIQEIIGEPAGLAIFEIRAVDINGRRSSPVTLSIELNSAKNLSVVSNFRVTNTASGDVTEFVGPDVKLAWDRIPEEDIIESIFYTLEIYDSQNRMLRSVRIENQYTYDYLLMYNKADFALHNSDALGINRKLYFRIRAEGDDGEQSVEWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107028,38760 Da
isoelectric point:5,16186
aromaticity:0,11275
hydropathy:-0,39958

Domains

View on InterPro
Domain architecture
YP_009856533.1
1 949 aa
ATT 598–696 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009856533.1
1 949 aa
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9301
Central domain 313 526 215 0,4137
C-terminal 527 949 422 0,0042
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage L6jm [NCBI] · taxon 2713222
Uroviricota Caudoviricetes Demerecviridae Tequintavirus Tequintavirus L6jm
Host
Salmonella enterica [NCBI] · taxon 28901
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_009856533.1 [NCBI]
Genbank nucleotide accession
NC_048852 [NCBI]
CDS location
range 86626 -> 89475
strand -
CDS
ATGAAAAAAATATTAGATAGTGCTAGAAGCTACTTAAAAACTAACAGCAGAATAAAAACTGCTAGTCTAATTTCCCTAGAATTACCTGGCTCTACTGGTACTAGTACTGCTTTTATTTATTTAACTGATTATTTTAGAGATGTACTATATAATGGTATTTTGTACCAGGCCGGTAAAGTTAAGTCTATTAGCACACATAAACAAAATAGAGATTTATCTATTGGCAGTCTATCTTTTACTATTACAGGTACAGCGCAGGATGAAGTATTGAAACTAGTGCAGAATGGTGTGTCCTTTTTAGATAGACTAGTATCAATCCACCAAGCAATTATTACAGAGGACGGTTCTATTTTACCTGTAGACCCAGACACAAATGGCCCTTTATTATACTTTAGGGGGAGAATTACCGGTGGAGGTATTAAGGATAACATTAGTACTTCAGGGGTTGGAACCTCCACAATTACTTGGAATTGTTCTAACCAATTCTATGATTTTGATAGGGTTAATGGTAGATTTACTGATGATGCTTCTCATAGGGGGCTTGAGGTTGTAGCAGGGCAGTTAGTTCCATCTAACGGGGCTAAAAGACTTGAGTACCAAGAAGATTATGGGTTCTTTCACGCCAATAAAAGTATTTCTATTCTAGCAAAATATCAGGTACAGGAAGAAAGATACAAGCTAAAGTCTAAGAAAAAGCTATTTGGCCTATCTAGAAGCTATAGTCTTAAAAAGTATTATGAGACTGTTACTAAAGAAGTAGATATAGATTTTAACCTTGCTGCTAAATATATACCAGTAGTTTATGGTGTACAGAAAATACCTGGAATACCTATTTTTGCGGATACGGAATTACACAATCCTAATATAGTTTACGTAGTATATGCTTTTGCTGAAGGAGAGATAGACGGTTTTCTTGACTTTTCCTTCGGGGATAACCCTATGATTTGTATGGACTCTAATGATAGCTCTGCTAGAACCTGTTTCGGTGTTAAAAAAGTAGCCGGAGACACCATGCAAAGAATAGCATCAGGAATATCTTCTAGTAGTCCTTCTGTGCATGGTCAGGAATATAAGTATAATGATGGTAATGGTGATATAAGAATTTGGACTTATCATGGAAAAGCTGATCAAACGGCTTCTGAAGTATTAGTAAATATAGCGAAGGAACGTGGGTTCTACCTCCAAAATATGAACGGTAATGGGCCTGAGTACTGGGATGCTAGATATAAACTATTAGATACTGCATACGCGGTAGTACGCTTTACTATTAATGAAAATAGAACTGAGATCCCAGAAGTTAGTGCTGAGATTCAGGGTAAGAAGATAAAAATCTATCATTCTGATGGTAGAGTAACTGCTAATAGCACTAGTTTAAATGGTATCTGGCAAACACTTGATTACTTAACTTCAGATAGATACGGTGCTAACATTACTATTGATCAGTTCCCTCTTCAACAATTGGTACAGGAAGCTGCTATCCTAGATATTATAGATGAATCTTACCAAGTATCCTGGCAGCCATACTGGAGATACGTTGGGTGGACTGATCCATTAGCAGAAAATAGACAAATAGTACAAATGAATACTATTCTAGATACATCTGAATCAGTATTTAAAAATGTGCAAGGTTTGCTAGAGTCCTATGGCGGGGCTATTAACAACTTATCTGGCCAGTATAGGATTACTGTAGAAAAATACTCTAATACTCCATTAGAGATTAATTTTCTGGATACTTATGGTGACTTAGAGCTATCAGATACTACTGGTAGAAATAAATTCAACTCAGTTCAAGCATCTATCGTAGATCCTGCTCTTAGCTGGAAAACTAATGCTATTACCTTTTACAACTCTAAGTATAAAGAGCAGGATAAAAATCTAGACAAAAAATTACAGTTATCTTTTGCAAATATAACTAACTACTACACTGCTAGAAGTTTTGCAGACAGAGAACTTAAGAAATCCAGGTATTCTAGAACCCTCTCATTTTCTTTGCCATATCAATTCATTGGTATTGAGCCTAACGATGCTATTGCATTTACATATGACCGTTACGGATGGGATAAGAAATACTTTTTAGTAGATGAAGTCGAAAACTCTAGAGAAGGAAAGATAAACGTCACCCTACAGGAGTATGGGGAAGATGTATTTATCAACTCTGATCAAGTAGATAATAGTGGTAATGATATACCAGATATTAGTAACAACGTTCTTCCTCCTAGAGATTTTAAATATACTCCTACACCGGGTGGTTTAGTTGGCTCTATAGGAAAAAATGGTGAGCTATCTTGGCTTCCAAGTTTAACTAATAACGTAGTTTATTACTCTATCGTGCATTCAGGTCATGCTGAACCCTATATCGTGCAGCAACTAGAAACAAATCCCAATGAACGCATGATCCAAGAGATAATTGGAGAGCCTGCAGGTTTAGCAATATTTGAAATAAGAGCTGTGGATATAAACGGTAGAAGAAGTTCTCCAGTAACATTATCTATAGAACTTAACTCTGCTAAAAACCTAAGCGTAGTATCTAATTTTAGAGTAACTAATACGGCCTCTGGGGATGTAACTGAGTTTGTAGGCCCAGATGTAAAACTAGCTTGGGATAGGATACCTGAAGAAGATATAATAGAAAGTATATTCTATACTCTGGAAATCTATGATTCCCAGAATAGAATGCTAAGAAGTGTACGTATTGAAAATCAGTATACTTATGACTATTTATTAATGTATAATAAGGCAGATTTTGCTCTTCATAACAGTGATGCTCTAGGAATCAATAGAAAACTATATTTTCGTATTAGAGCAGAAGGAGATGATGGAGAACAGTCTGTGGAGTGGGCATCCATTTAA

Genome Context

Tertiary structure

YP_009856533.1
ESMFold structure
Source ESMFold
pLDDT 81.6
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation and characterization of polyvalent bacteriophage infecting Salmonella choleraesuis and Escherichia coli Zhang,Y., Lin,Y. and Zhu,W. 2021-07-14 — GenBank