Phage RBP Database

Genbank accession

AXF40805.1 [GenBank]

Protein name

long tail fiber proximal subunit

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence RBPdetect

Probability 0,63

TF

Evidence RBPdetect2

Probability 0,54

Seq2Symm

C3 confidence 0,934 truncated

C3	0,934
C1	0,280
D3	0,003

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MSEVKTSFRASYGLDAAGEKVINVAKADKTVMTDGVNVEYLIQENTTQQYDPERAYEKGFIIEFNDRLWIAEQDIPKPAGSFNEGYWRPVRTDPKWKPIDSGKYQLHVGDYITVDTRAGLAVELTLPTNPIPQEGDTIVVKDVGGQPGYTSVLVFAPVQSIIDKGVSIPQKRMTIPFSEWTFVYTKSQWSLYDGVEAPVARTVTTSGPTQIQSGDTILRNYDKVAPIVLTFPKFANNGDIIHFVGMNENTVPYYHLELNAFDSNTSIGSPGKSSQIFYRSLSGYFIFNSLTSTWYLYDSDMTNRLRTVSTDTEIFPNETVAVVGKDNTTTQTIKLTLPQNVQPGDQVTISLNYIRKGQTVNIVPKGTDMILTNQNLTQFPKRSSYPPAANWVNTNLLSYNGSNDYPPVLTFAYIDMGPIKQWLMVSCLPVLERVDPSTDDTRTRLGVIALANQSQANLDKENISVTANPLAREVAITPETLANRTALDSRRGIARIAKQEEVNLTTDDAALAYDTIVTPKTLNGKKATETMVGLAEIATQAETNSNTDDSRIITSKKLDGRRATPALAGVAKLVATGGTAPVKGGTNTRDTAGTGIYNHADFENIVTPKTLREYYSTEMALGTVYLANSAEVISGAATLAKYPLAVTPETLHTKTATDERIGFSQVAKQAEVDAGTDYFKFVTPKTLAGRIAREDLAGIAKLATQGEFDAGTAGLISGPDKIKTFFSRAERTIVNNAEGLTQSGSIWTGLKLNILAPSETQRGTARYATQDETDKGVDATTIVTPAKLHAKKATTDAEGIVRMANTAETVDGTAYNLAVSPGNLKYVVQSELTWEATPERRGFIKLSTGSTTWQGNTVDGNANIDIETQFNKNGMAVSPYEFNRVLRNYLPIGAKAVDSDKLDGLDSSQFIRRDIAQVVNGALTLTQPTTATYITASNDVSVQALLSANQINVRKSGTPDDTSVTKNAGINLYGAPQSATGRPTYGIHFSSTGGTDPNGIHGYGGGTWGTYFAQSISSAAEQRAWYFQQIFNGAVKNVGSITAQGDVWFDGVINSDKTFRLKNSVIAEKDSGDNLIFGTTDQQMYLRSKAADIKVQEVVGGTSYQVITSKNFVDEGNKTYVRKTGDSMTGRLNISQPITATINQSAATPNAVPNASNFGTWTIDITDPAIYNTMRPYVVGVNAINKETSEVLPWFDKYEEFNGPGTLSQFGSSASNGSGTYQIWAPRPPADKANLPGHIAGTMWTRQWNPITNKWDGWGRVFTNNHPPLPTDIGAMSNNGSVFDSMRIRDWIQVGNLRIYADPSTKTVRFDWIE

Physico‐chemical properties

protein length:	1314 AA
molecular weight:	143125,31890 Da
isoelectric point:	5,59821
aromaticity:	0,08676
hydropathy:	-0,36248

Domain architecture

AXF40805.1

1 1314 aa

ATT 1153–1262 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR048391
ATT

IPR048391

AXF40805.1

11314 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1986
ATT

DC_1986 DC_1209

AXF40805.1

11314 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR048391	ATT	DC_0875	1153	1262	InterPro cluster	Long-tail fiber proximal subunit domain	C-terminal	Medium	Text match	795 proteins / 796 hits

Proteins with similar domain architecture

Phage

Acinetobacter phage vB_ApiM_fHyAci03 [NCBI] · taxon 2269366

Uroviricota Caudoviricetes Pantevenvirales Twarogvirinae Lazarusvirus

Host

Acinetobacter pittii [NCBI] · taxon 48296

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)