Protein

View in Explore
Genbank accession
AXF40805.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TF
Evidence RBPdetect
Probability 0,63
Protein sequence
MSEVKTSFRASYGLDAAGEKVINVAKADKTVMTDGVNVEYLIQENTTQQYDPERAYEKGFIIEFNDRLWIAEQDIPKPAGSFNEGYWRPVRTDPKWKPIDSGKYQLHVGDYITVDTRAGLAVELTLPTNPIPQEGDTIVVKDVGGQPGYTSVLVFAPVQSIIDKGVSIPQKRMTIPFSEWTFVYTKSQWSLYDGVEAPVARTVTTSGPTQIQSGDTILRNYDKVAPIVLTFPKFANNGDIIHFVGMNENTVPYYHLELNAFDSNTSIGSPGKSSQIFYRSLSGYFIFNSLTSTWYLYDSDMTNRLRTVSTDTEIFPNETVAVVGKDNTTTQTIKLTLPQNVQPGDQVTISLNYIRKGQTVNIVPKGTDMILTNQNLTQFPKRSSYPPAANWVNTNLLSYNGSNDYPPVLTFAYIDMGPIKQWLMVSCLPVLERVDPSTDDTRTRLGVIALANQSQANLDKENISVTANPLAREVAITPETLANRTALDSRRGIARIAKQEEVNLTTDDAALAYDTIVTPKTLNGKKATETMVGLAEIATQAETNSNTDDSRIITSKKLDGRRATPALAGVAKLVATGGTAPVKGGTNTRDTAGTGIYNHADFENIVTPKTLREYYSTEMALGTVYLANSAEVISGAATLAKYPLAVTPETLHTKTATDERIGFSQVAKQAEVDAGTDYFKFVTPKTLAGRIAREDLAGIAKLATQGEFDAGTAGLISGPDKIKTFFSRAERTIVNNAEGLTQSGSIWTGLKLNILAPSETQRGTARYATQDETDKGVDATTIVTPAKLHAKKATTDAEGIVRMANTAETVDGTAYNLAVSPGNLKYVVQSELTWEATPERRGFIKLSTGSTTWQGNTVDGNANIDIETQFNKNGMAVSPYEFNRVLRNYLPIGAKAVDSDKLDGLDSSQFIRRDIAQVVNGALTLTQPTTATYITASNDVSVQALLSANQINVRKSGTPDDTSVTKNAGINLYGAPQSATGRPTYGIHFSSTGGTDPNGIHGYGGGTWGTYFAQSISSAAEQRAWYFQQIFNGAVKNVGSITAQGDVWFDGVINSDKTFRLKNSVIAEKDSGDNLIFGTTDQQMYLRSKAADIKVQEVVGGTSYQVITSKNFVDEGNKTYVRKTGDSMTGRLNISQPITATINQSAATPNAVPNASNFGTWTIDITDPAIYNTMRPYVVGVNAINKETSEVLPWFDKYEEFNGPGTLSQFGSSASNGSGTYQIWAPRPPADKANLPGHIAGTMWTRQWNPITNKWDGWGRVFTNNHPPLPTDIGAMSNNGSVFDSMRIRDWIQVGNLRIYADPSTKTVRFDWIE
Physico‐chemical
properties
protein length:1314 AA
molecular weight: 143125,31890 Da
isoelectric point:5,59821
aromaticity:0,08676
hydropathy:-0,36248

Domains

Domains [InterPro]
IPR048391
1153–1262
IPR048391
AXF40805.1
1 1314
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_ApiM_fHyAci03
[NCBI] 		2269366 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF40805.1 [NCBI]
Genbank nucleotide accession
MH460829 [NCBI]
CDS location
range 150336 -> 154280
strand +
CDS
ATGTCTGAAGTAAAAACAAGTTTCCGTGCGTCATACGGTCTAGACGCGGCTGGTGAGAAAGTAATTAATGTTGCAAAGGCTGACAAAACTGTCATGACCGATGGTGTCAACGTCGAATATCTCATTCAGGAAAATACGACCCAACAATATGACCCAGAGCGTGCCTATGAAAAAGGATTCATTATAGAATTTAATGATCGTCTCTGGATTGCAGAACAAGACATCCCTAAACCTGCAGGTAGCTTCAATGAAGGGTACTGGCGCCCAGTACGTACAGACCCAAAGTGGAAGCCTATCGATTCTGGTAAATATCAGTTACATGTTGGTGATTATATCACTGTAGATACGCGTGCAGGATTAGCTGTAGAACTAACATTACCTACTAATCCTATACCGCAGGAAGGCGATACAATTGTTGTAAAGGATGTCGGCGGGCAACCAGGTTACACATCGGTGTTAGTCTTTGCACCTGTGCAGTCAATTATTGACAAAGGCGTAAGTATTCCACAAAAACGAATGACTATTCCATTTTCTGAATGGACATTTGTATACACAAAGAGCCAATGGTCATTATATGATGGCGTAGAAGCTCCAGTAGCAAGAACTGTTACTACATCTGGTCCTACTCAAATCCAATCAGGCGATACGATTCTTAGAAACTATGATAAAGTAGCTCCTATTGTATTGACTTTTCCTAAATTTGCCAACAATGGCGACATAATTCATTTTGTAGGCATGAATGAAAATACAGTGCCTTATTATCACTTAGAGCTTAATGCATTTGATAGCAATACAAGTATTGGTTCTCCGGGTAAGTCATCGCAAATTTTCTATCGTTCGCTAAGCGGGTATTTCATTTTTAATAGCTTGACTTCAACTTGGTATTTGTACGATTCAGATATGACAAATCGTCTTAGAACTGTTAGTACTGATACTGAGATTTTCCCGAATGAAACTGTAGCAGTAGTAGGCAAAGATAATACCACTACACAGACTATTAAATTGACATTGCCACAAAACGTGCAACCTGGCGACCAGGTAACAATTTCATTAAATTATATTAGAAAGGGACAAACTGTTAACATCGTGCCTAAAGGCACCGATATGATTTTAACAAATCAAAATCTAACTCAGTTCCCTAAACGCTCAAGTTATCCACCTGCTGCCAATTGGGTTAACACTAATTTATTGTCATATAACGGTTCAAATGACTACCCGCCAGTATTAACATTTGCATACATTGATATGGGGCCTATCAAACAATGGCTGATGGTAAGTTGTTTGCCTGTATTAGAGCGTGTTGATCCGTCAACAGATGATACTCGTACTCGTTTAGGTGTTATTGCTTTAGCAAATCAATCTCAAGCAAACTTAGACAAAGAAAATATTTCGGTTACTGCAAATCCATTAGCACGAGAAGTCGCTATCACGCCGGAAACTCTTGCCAATAGGACCGCTTTGGACAGCCGTCGTGGAATCGCAAGAATCGCAAAACAAGAAGAAGTAAACTTAACTACAGATGATGCTGCATTAGCATATGATACTATTGTTACGCCTAAGACTCTTAATGGCAAAAAGGCTACAGAAACGATGGTAGGTTTGGCAGAAATTGCTACTCAAGCCGAAACCAATAGCAACACTGACGATTCTCGTATCATCACTTCTAAGAAATTAGATGGACGACGCGCAACACCTGCTTTAGCCGGAGTCGCTAAACTTGTTGCTACAGGTGGCACTGCGCCTGTTAAAGGAGGTACAAATACGCGTGATACTGCTGGAACTGGCATTTATAATCATGCAGACTTTGAGAACATTGTTACACCTAAAACATTGAGAGAATATTATTCTACAGAAATGGCATTAGGTACAGTGTATCTTGCAAATTCTGCTGAAGTTATTTCTGGTGCAGCTACATTAGCTAAATATCCATTAGCAGTAACTCCTGAAACTTTGCACACTAAGACCGCTACCGATGAGCGTATAGGCTTTTCACAAGTGGCTAAACAAGCCGAAGTTGATGCTGGAACAGATTATTTTAAATTTGTTACACCGAAAACTTTAGCAGGAAGAATTGCACGAGAAGACTTAGCAGGTATCGCAAAATTAGCAACCCAAGGCGAATTTGACGCTGGTACAGCTGGATTAATTTCAGGTCCAGATAAAATTAAGACATTTTTCTCTCGCGCTGAAAGAACTATTGTCAATAATGCTGAAGGTTTAACACAATCTGGTAGCATTTGGACCGGGTTAAAGTTGAATATTCTTGCACCATCCGAGACCCAACGTGGTACAGCAAGATATGCTACGCAAGATGAAACAGATAAAGGTGTTGATGCCACAACAATTGTGACTCCTGCAAAATTACATGCTAAGAAAGCCACTACAGATGCAGAAGGTATTGTCAGAATGGCAAATACTGCTGAGACGGTAGATGGTACTGCATATAATTTAGCAGTATCGCCTGGCAATCTAAAATATGTTGTACAATCAGAATTGACATGGGAGGCCACACCTGAACGTAGAGGTTTCATTAAACTTTCTACGGGTTCGACAACATGGCAAGGCAACACAGTTGATGGTAATGCAAATATCGACATTGAAACTCAATTTAACAAAAATGGTATGGCTGTTTCGCCGTATGAGTTCAACCGTGTTTTAAGGAACTATTTACCTATTGGCGCAAAAGCAGTTGATTCTGATAAATTAGATGGATTGGATTCATCACAGTTTATTCGTAGAGACATTGCCCAAGTTGTTAATGGCGCATTAACACTGACACAGCCTACAACTGCAACATACATTACTGCTTCTAATGATGTATCAGTCCAAGCTCTTTTATCTGCTAATCAGATTAACGTACGAAAATCTGGAACTCCTGATGATACGTCTGTTACAAAGAACGCTGGTATAAATTTGTATGGCGCTCCACAATCTGCTACAGGACGTCCGACCTATGGTATTCATTTTTCTAGTACCGGTGGCACAGACCCTAATGGGATACATGGCTATGGCGGCGGGACTTGGGGTACGTATTTTGCTCAAAGCATCTCTAGCGCAGCTGAACAACGTGCATGGTACTTCCAGCAGATTTTTAACGGTGCAGTTAAAAACGTTGGCTCTATCACAGCGCAAGGCGATGTTTGGTTTGATGGTGTTATTAACAGTGATAAAACATTCAGACTTAAAAATAGCGTCATAGCTGAAAAGGATTCAGGCGATAATCTAATTTTCGGTACGACTGATCAGCAAATGTACCTTCGTTCTAAAGCAGCAGATATAAAGGTTCAAGAAGTAGTTGGTGGAACTTCTTATCAAGTTATTACATCTAAAAACTTTGTTGATGAAGGTAACAAAACTTATGTGAGAAAGACTGGCGATTCAATGACTGGGCGCCTCAATATTTCTCAACCTATAACTGCTACTATCAACCAATCTGCTGCGACACCAAATGCAGTTCCAAATGCCAGCAATTTTGGTACATGGACTATTGATATAACTGATCCTGCAATATATAATACTATGCGCCCATATGTTGTTGGAGTAAATGCAATCAATAAAGAGACAAGTGAAGTCTTGCCTTGGTTTGATAAGTACGAGGAGTTTAATGGGCCTGGTACATTGTCACAATTTGGATCTTCTGCTAGTAATGGTTCTGGTACATACCAAATCTGGGCGCCACGTCCGCCAGCAGATAAAGCGAATTTACCTGGGCATATTGCTGGCACAATGTGGACAAGACAGTGGAATCCTATTACAAATAAATGGGATGGCTGGGGCAGAGTATTCACAAATAACCATCCACCATTGCCTACAGACATTGGCGCTATGAGCAATAATGGTTCAGTTTTTGATTCTATGAGAATTAGAGATTGGATTCAAGTAGGTAATTTGAGAATTTATGCAGACCCATCTACAAAAACCGTTCGTTTTGATTGGATTGAATAA

Tertiary structure

PDB ID
ba34446b97b820cd1a2d8a56584d2e9fc5b868feee409f1fbde7f2f534f36c62
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5193
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of vB_ApiM_fHyAci03, a novel lytic bacteriophage that infects clinical Acinetobacter strains Pulkkinen,E., Wicklund,A., Oduor,J.M.O., Skurnik,M. and Kiljunen,S. 2019 — GenBank